RNA–Protein interactions for RNA: ENST00000428966.1

PABPC1P11-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 11, humanhuman

BASIC

Gene PABPC1P11, Length 2,007 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11-201ENST00000428966 TRPM3Q9HCF6 1732 aaPredicted RBP16.19■□□□□ 0.18
PABPC1P11-201ENST00000428966 PAK3O75914 559 aaPredicted RBP16.19■□□□□ 0.18
PABPC1P11-201ENST00000428966 MIER1Q8N108 512 aa16.19■□□□□ 0.18
PABPC1P11-201ENST00000428966 COL22A1Q8NFW1 1626 aaPredicted RBP16.18■□□□□ 0.18
PABPC1P11-201ENST00000428966 RGS17Q9UGC6 210 aaPredicted RBP16.18■□□□□ 0.18
PABPC1P11-201ENST00000428966 EIF4G2P78344 907 aaKnown RBP eCLIP16.18■□□□□ 0.18
PABPC1P11-201ENST00000428966 CABLES1Q8TDN4 633 aa16.18■□□□□ 0.18
PABPC1P11-201ENST00000428966 ARHGEF10O15013 1369 aa16.17■□□□□ 0.18
PABPC1P11-201ENST00000428966 SLC24A1O60721 1099 aa16.17■□□□□ 0.18
PABPC1P11-201ENST00000428966 ADAMTS2O95450 1211 aa16.17■□□□□ 0.18
PABPC1P11-201ENST00000428966 HSPA5P11021 654 aaKnown RBP16.17■□□□□ 0.18
PABPC1P11-201ENST00000428966 TMF1P82094 1093 aa16.17■□□□□ 0.18
PABPC1P11-201ENST00000428966 PUS7Q96PZ0 661 aaKnown RBP16.17■□□□□ 0.18
PABPC1P11-201ENST00000428966 SLC12A5Q9H2X9 1139 aa16.17■□□□□ 0.18
PABPC1P11-201ENST00000428966 PLEKHG5O94827 1062 aa16.16■□□□□ 0.18
PABPC1P11-201ENST00000428966 USP6P35125 1406 aa16.16■□□□□ 0.18
PABPC1P11-201ENST00000428966 CPSF1Q10570 1443 aaKnown RBP16.16■□□□□ 0.18
PABPC1P11-201ENST00000428966 MEX3CQ5U5Q3 659 aaKnown RBP16.16■□□□□ 0.18
PABPC1P11-201ENST00000428966 TMC1Q8TDI8 760 aa16.15■□□□□ 0.18
PABPC1P11-201ENST00000428966 CD163L1Q9NR16 1453 aa16.15■□□□□ 0.18
PABPC1P11-201ENST00000428966 ALS2Q96Q42 1657 aa16.15■□□□□ 0.18
PABPC1P11-201ENST00000428966 SSH2Q76I76 1423 aa16.14■□□□□ 0.17
PABPC1P11-201ENST00000428966 C8orf37Q96NL8 207 aa16.14■□□□□ 0.17
PABPC1P11-201ENST00000428966 NUTM2GQ5VZR2 741 aa16.13■□□□□ 0.17
PABPC1P11-201ENST00000428966 ZNF692Q9BU19 519 aaPredicted RBP16.12■□□□□ 0.17
PABPC1P11-201ENST00000428966 ABTB2Q8N961 1025 aa16.12■□□□□ 0.17
PABPC1P11-201ENST00000428966 KTN1Q86UP2 1357 aaKnown RBP16.11■□□□□ 0.17
PABPC1P11-201ENST00000428966 A0A1W2PP64 1363 aa16.11■□□□□ 0.17
PABPC1P11-201ENST00000428966 BRD4O60885 1362 aaPredicted RBP16.11■□□□□ 0.17
PABPC1P11-201ENST00000428966 YTHDC1Q96MU7 727 aaKnown RBP16.1■□□□□ 0.17
PABPC1P11-201ENST00000428966 AFF2P51816 1311 aa16.1■□□□□ 0.17
PABPC1P11-201ENST00000428966 TTC21BQ7Z4L5 1316 aa16.1■□□□□ 0.17
PABPC1P11-201ENST00000428966 NINLQ9Y2I6 1382 aa16.1■□□□□ 0.17
PABPC1P11-201ENST00000428966 HAP1P54257 671 aaPredicted RBP16.09■□□□□ 0.17
PABPC1P11-201ENST00000428966 CDCA8Q53HL2 280 aa16.09■□□□□ 0.17
PABPC1P11-201ENST00000428966 POTEAQ6S8J7 498 aa16.09■□□□□ 0.17
PABPC1P11-201ENST00000428966 NGLY1Q96IV0 654 aa16.09■□□□□ 0.17
PABPC1P11-201ENST00000428966 ILDR2Q71H61 639 aa16.09■□□□□ 0.17
PABPC1P11-201ENST00000428966 C11orf95C9JLR9 678 aaPredicted RBP16.08■□□□□ 0.16
PABPC1P11-201ENST00000428966 TERF2IPQ9NYB0 399 aa16.08■□□□□ 0.16
PABPC1P11-201ENST00000428966 HDGFL2Q7Z4V5 671 aaPredicted RBP16.07■□□□□ 0.16
PABPC1P11-201ENST00000428966 ABCA3Q99758 1704 aa16.07■□□□□ 0.16
PABPC1P11-201ENST00000428966 AKAP12Q02952 1782 aa16.07■□□□□ 0.16
PABPC1P11-201ENST00000428966 NRKQ7Z2Y5 1582 aa16.07■□□□□ 0.16
PABPC1P11-201ENST00000428966 FNBP4Q8N3X1 1017 aaPredicted RBP16.07■□□□□ 0.16
PABPC1P11-201ENST00000428966 NLRP6P59044 892 aa16.06■□□□□ 0.16
PABPC1P11-201ENST00000428966 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.06■□□□□ 0.16
PABPC1P11-201ENST00000428966 USP19O94966 1318 aa16.06■□□□□ 0.16
PABPC1P11-201ENST00000428966 CRYBG1Q9Y4K1 1723 aa16.06■□□□□ 0.16
PABPC1P11-201ENST00000428966 NLRP13Q86W25 1043 aa16.06■□□□□ 0.16
PABPC1P11-201ENST00000428966 ANKRD36BQ8N2N9 1353 aa16.06■□□□□ 0.16
PABPC1P11-201ENST00000428966 TTC21AQ8NDW8 1320 aa16.06■□□□□ 0.16
PABPC1P11-201ENST00000428966 MON2Q7Z3U7 1717 aa16.05■□□□□ 0.16
PABPC1P11-201ENST00000428966 PIK3C2AO00443 1686 aa16.05■□□□□ 0.16
PABPC1P11-201ENST00000428966 FAM83GA6ND36 823 aa16.05■□□□□ 0.16
PABPC1P11-201ENST00000428966 ZBTB22O15209 634 aa16.05■□□□□ 0.16
PABPC1P11-201ENST00000428966 ZNF772Q68DY9 489 aaPredicted RBP16.05■□□□□ 0.16
PABPC1P11-201ENST00000428966 BCL9LQ86UU0 1499 aa16.04■□□□□ 0.16
PABPC1P11-201ENST00000428966 EDC4Q6P2E9 1401 aaKnown RBP16.04■□□□□ 0.16
PABPC1P11-201ENST00000428966 POLR3GLQ9BT43 218 aa16.04■□□□□ 0.16
PABPC1P11-201ENST00000428966 GCP02774 474 aa16.04■□□□□ 0.16
PABPC1P11-201ENST00000428966 NME9Q86XW9 330 aa16.04■□□□□ 0.16
PABPC1P11-201ENST00000428966 ZRANB1Q9UGI0 708 aa16.04■□□□□ 0.16
PABPC1P11-201ENST00000428966 ZC3H6P61129 1189 aaKnown RBP16.03■□□□□ 0.16
PABPC1P11-201ENST00000428966 USP21Q9UK80 565 aa16.03■□□□□ 0.16
PABPC1P11-201ENST00000428966 SLIT2O94813 1529 aa16.03■□□□□ 0.16
PABPC1P11-201ENST00000428966 MYOM1P52179 1685 aa16.03■□□□□ 0.16
PABPC1P11-201ENST00000428966 PHRF1Q9P1Y6 1649 aaKnown RBP16.02■□□□□ 0.16
PABPC1P11-201ENST00000428966 KIAA0232Q92628 1395 aa16.02■□□□□ 0.16
PABPC1P11-201ENST00000428966 MARF1Q9Y4F3 1742 aaKnown RBP16.02■□□□□ 0.15
PABPC1P11-201ENST00000428966 CARD14Q9BXL6 1004 aa16.01■□□□□ 0.15
PABPC1P11-201ENST00000428966 QTRT2Q9H974 415 aaKnown RBP16.01■□□□□ 0.15
PABPC1P11-201ENST00000428966 PRDM11Q9NQV5 511 aa16.01■□□□□ 0.15
PABPC1P11-201ENST00000428966 CHRNA2Q15822 529 aa16■□□□□ 0.15
PABPC1P11-201ENST00000428966 SLIT3O75094 1523 aa16■□□□□ 0.15
PABPC1P11-201ENST00000428966 KIF7Q2M1P5 1343 aa16■□□□□ 0.15
PABPC1P11-201ENST00000428966 FOXD4L1Q9NU39 408 aa15.99■□□□□ 0.15
PABPC1P11-201ENST00000428966 USP31Q70CQ4 1352 aa15.99■□□□□ 0.15
PABPC1P11-201ENST00000428966 HOXD11P31277 338 aaPredicted RBP15.99■□□□□ 0.15
PABPC1P11-201ENST00000428966 UNC5CLQ8IV45 518 aa15.99■□□□□ 0.15
PABPC1P11-201ENST00000428966 BTG4Q9NY30 223 aa15.99■□□□□ 0.15
PABPC1P11-201ENST00000428966 CPDO75976 1380 aa15.99■□□□□ 0.15
PABPC1P11-201ENST00000428966 SOX12O15370 315 aa15.98■□□□□ 0.15
PABPC1P11-201ENST00000428966 TRPC5Q9UL62 973 aaPredicted RBP15.97■□□□□ 0.15
PABPC1P11-201ENST00000428966 OVOS2A0A0J9YW53 1432 aa15.97■□□□□ 0.15
PABPC1P11-201ENST00000428966 OVOS2Q6IE36 1432 aa15.97■□□□□ 0.15
PABPC1P11-201ENST00000428966 ATRNO75882 1429 aa15.97■□□□□ 0.15
PABPC1P11-201ENST00000428966 FYB1O15117 783 aa15.96■□□□□ 0.15
PABPC1P11-201ENST00000428966 RXRBP28702 533 aa15.96■□□□□ 0.15
PABPC1P11-201ENST00000428966 PLCH1Q4KWH8 1693 aa15.95■□□□□ 0.14
PABPC1P11-201ENST00000428966 KCNH5Q8NCM2 988 aa15.95■□□□□ 0.14
PABPC1P11-201ENST00000428966 NSD3Q9BZ95 1437 aa15.95■□□□□ 0.14
PABPC1P11-201ENST00000428966 COL14A1Q05707 1796 aaKnown RBP15.95■□□□□ 0.14
PABPC1P11-201ENST00000428966 WASHC2AQ641Q2 1341 aa15.95■□□□□ 0.14
PABPC1P11-201ENST00000428966 NFAT5O94916 1531 aa15.95■□□□□ 0.14
PABPC1P11-201ENST00000428966 RBM6P78332 1123 aaKnown RBP15.94■□□□□ 0.14
PABPC1P11-201ENST00000428966 ARHGEF25Q86VW2 580 aa15.94■□□□□ 0.14
PABPC1P11-201ENST00000428966 GGNBP2Q9H3C7 697 aa15.94■□□□□ 0.14
PABPC1P11-201ENST00000428966 PANK3Q9H999 370 aa15.94■□□□□ 0.14
PABPC1P11-201ENST00000428966 USP54Q70EL1 1684 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms