RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 HSPA2P54652 639 aa17.73■□□□□ 0.43
THBS3-202ENST00000428962 PNNQ9H307 717 aaKnown RBP17.73■□□□□ 0.43
THBS3-202ENST00000428962 CABP1Q9NZU7 370 aa17.73■□□□□ 0.43
THBS3-202ENST00000428962 CPS1P31327 1500 aa17.73■□□□□ 0.43
THBS3-202ENST00000428962 PDE4AP27815 886 aa17.72■□□□□ 0.43
THBS3-202ENST00000428962 SIRT1Q96EB6 747 aa17.72■□□□□ 0.43
THBS3-202ENST00000428962 NOP58Q9Y2X3 529 aaKnown RBP17.72■□□□□ 0.43
THBS3-202ENST00000428962 MAPK8IP3Q9UPT6 1336 aa17.71■□□□□ 0.43
THBS3-202ENST00000428962 CDC42BPGQ6DT37 1551 aa17.71■□□□□ 0.43
THBS3-202ENST00000428962 UBR1Q8IWV7 1749 aa17.71■□□□□ 0.43
THBS3-202ENST00000428962 PNPLA6Q8IY17 1366 aa17.71■□□□□ 0.43
THBS3-202ENST00000428962 WAPLQ7Z5K2 1190 aa17.71■□□□□ 0.43
THBS3-202ENST00000428962 IPO9Q96P70 1041 aaKnown RBP17.71■□□□□ 0.43
THBS3-202ENST00000428962 BACH2Q9BYV9 841 aa17.71■□□□□ 0.43
THBS3-202ENST00000428962 C3P01024 1663 aa17.7■□□□□ 0.42
THBS3-202ENST00000428962 U2SURPO15042 1029 aaKnown RBP17.7■□□□□ 0.42
THBS3-202ENST00000428962 AAMPQ13685 434 aa17.7■□□□□ 0.42
THBS3-202ENST00000428962 EDC4Q6P2E9 1401 aaKnown RBP17.7■□□□□ 0.42
THBS3-202ENST00000428962 METP08581 1390 aa17.69■□□□□ 0.42
THBS3-202ENST00000428962 WASLO00401 505 aaPredicted RBP17.69■□□□□ 0.42
THBS3-202ENST00000428962 DIAPH1O60610 1272 aaKnown RBP17.69■□□□□ 0.42
THBS3-202ENST00000428962 CT47B1P0C2W7 299 aaPredicted RBP17.69■□□□□ 0.42
THBS3-202ENST00000428962 TMEM2Q9UHN6 1383 aa17.69■□□□□ 0.42
THBS3-202ENST00000428962 RARSP54136 660 aaKnown RBP17.68■□□□□ 0.42
THBS3-202ENST00000428962 PLEKHF1Q96S99 279 aa17.68■□□□□ 0.42
THBS3-202ENST00000428962 SETD1BQ9UPS6 1966 aaKnown RBP17.68■□□□□ 0.42
THBS3-202ENST00000428962 CPSF1Q10570 1443 aaKnown RBP17.68■□□□□ 0.42
THBS3-202ENST00000428962 PPIP5K1Q6PFW1 1433 aa17.68■□□□□ 0.42
THBS3-202ENST00000428962 IL16Q14005 1332 aa17.66■□□□□ 0.42
THBS3-202ENST00000428962 MON2Q7Z3U7 1717 aa17.66■□□□□ 0.42
THBS3-202ENST00000428962 TMPOP42166 694 aaKnown RBP17.65■□□□□ 0.42
THBS3-202ENST00000428962 CLUAP1Q96AJ1 413 aa17.64■□□□□ 0.41
THBS3-202ENST00000428962 ITSN1Q15811 1721 aa17.64■□□□□ 0.41
THBS3-202ENST00000428962 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.63■□□□□ 0.41
THBS3-202ENST00000428962 FRAT1Q92837 279 aaPredicted RBP17.63■□□□□ 0.41
THBS3-202ENST00000428962 NEFMP07197 916 aa17.63■□□□□ 0.41
THBS3-202ENST00000428962 TXNDC2Q86VQ3 553 aa17.63■□□□□ 0.41
THBS3-202ENST00000428962 ZBTB47Q9UFB7 747 aaPredicted RBP17.63■□□□□ 0.41
THBS3-202ENST00000428962 AKAP12Q02952 1782 aa17.62■□□□□ 0.41
THBS3-202ENST00000428962 LRRC7Q96NW7 1537 aa17.62■□□□□ 0.41
THBS3-202ENST00000428962 CDK12Q9NYV4 1490 aaPredicted RBP17.62■□□□□ 0.41
THBS3-202ENST00000428962 PLEKHG1Q9ULL1 1385 aa17.62■□□□□ 0.41
THBS3-202ENST00000428962 FCHSD2O94868 740 aa17.62■□□□□ 0.41
THBS3-202ENST00000428962 AATKQ6ZMQ8 1374 aa17.61■□□□□ 0.41
THBS3-202ENST00000428962 NUDT16Q96DE0 195 aaKnown RBP17.61■□□□□ 0.41
THBS3-202ENST00000428962 PANK1Q8TE04 598 aa17.61■□□□□ 0.41
THBS3-202ENST00000428962 COG6Q9Y2V7 657 aa17.61■□□□□ 0.41
THBS3-202ENST00000428962 CCDC61Q9Y6R9 512 aa17.61■□□□□ 0.41
THBS3-202ENST00000428962 ADAMTS13Q76LX8 1427 aa17.6■□□□□ 0.41
THBS3-202ENST00000428962 POLKQ9UBT6 870 aa17.6■□□□□ 0.41
THBS3-202ENST00000428962 TRIM35Q9UPQ4 493 aa17.6■□□□□ 0.41
THBS3-202ENST00000428962 MAP2P11137 1827 aaKnown RBP17.59■□□□□ 0.41
THBS3-202ENST00000428962 RIPK4P57078 832 aa17.58■□□□□ 0.41
THBS3-202ENST00000428962 FAM161AQ3B820 660 aa17.58■□□□□ 0.41
THBS3-202ENST00000428962 NPM2Q86SE8 214 aaKnown RBP17.58■□□□□ 0.41
THBS3-202ENST00000428962 PMFBP1Q8TBY8 1022 aa17.58■□□□□ 0.41
THBS3-202ENST00000428962 ZNF692Q9BU19 519 aaPredicted RBP17.58■□□□□ 0.41
THBS3-202ENST00000428962 ZKSCAN2Q63HK3 967 aa17.57■□□□□ 0.4
THBS3-202ENST00000428962 SKAP1Q86WV1 359 aa17.57■□□□□ 0.4
THBS3-202ENST00000428962 COG3Q96JB2 828 aa17.57■□□□□ 0.4
THBS3-202ENST00000428962 TOPAZ1Q8N9V7 1692 aa17.57■□□□□ 0.4
THBS3-202ENST00000428962 PPM1GO15355 546 aaPredicted RBP17.56■□□□□ 0.4
THBS3-202ENST00000428962 DDRGK1Q96HY6 314 aa17.56■□□□□ 0.4
THBS3-202ENST00000428962 RSPH6AQ9H0K4 717 aa17.56■□□□□ 0.4
THBS3-202ENST00000428962 TSR2Q969E8 191 aaKnown RBP17.56■□□□□ 0.4
THBS3-202ENST00000428962 ROBO2Q9HCK4 1378 aa17.56■□□□□ 0.4
THBS3-202ENST00000428962 PAK3O75914 559 aaPredicted RBP17.55■□□□□ 0.4
THBS3-202ENST00000428962 CALD1Q05682 793 aaKnown RBP17.55■□□□□ 0.4
THBS3-202ENST00000428962 NME9Q86XW9 330 aa17.55■□□□□ 0.4
THBS3-202ENST00000428962 BCL2L13Q9BXK5 485 aa17.55■□□□□ 0.4
THBS3-202ENST00000428962 EID1Q9Y6B2 187 aa17.55■□□□□ 0.4
THBS3-202ENST00000428962 SLIT1O75093 1534 aa17.55■□□□□ 0.4
THBS3-202ENST00000428962 PRKAR2BP31323 418 aa17.54■□□□□ 0.4
THBS3-202ENST00000428962 EXOSC9Q06265 439 aaKnown RBP17.54■□□□□ 0.4
THBS3-202ENST00000428962 FTSJ3Q8IY81 847 aaKnown RBP17.54■□□□□ 0.4
THBS3-202ENST00000428962 SMC4Q9NTJ3 1288 aa17.54■□□□□ 0.4
THBS3-202ENST00000428962 NRKQ7Z2Y5 1582 aa17.54■□□□□ 0.4
THBS3-202ENST00000428962 IGHDP01880 384 aa17.54■□□□□ 0.4
THBS3-202ENST00000428962 RGS3P49796 1198 aa17.53■□□□□ 0.4
THBS3-202ENST00000428962 MVPQ14764 893 aaKnown RBP17.53■□□□□ 0.4
THBS3-202ENST00000428962 DZIP1LQ8IYY4 767 aaKnown RBP17.53■□□□□ 0.4
THBS3-202ENST00000428962 DIP2AQ14689 1571 aa17.53■□□□□ 0.4
THBS3-202ENST00000428962 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.53■□□□□ 0.4
THBS3-202ENST00000428962 ARHGAP23Q9P227 1491 aa17.53■□□□□ 0.4
THBS3-202ENST00000428962 RLBP1P12271 317 aa17.52■□□□□ 0.4
THBS3-202ENST00000428962 VIRMAQ69YN4 1812 aaKnown RBP17.52■□□□□ 0.39
THBS3-202ENST00000428962 IL13P35225 146 aa17.51■□□□□ 0.39
THBS3-202ENST00000428962 NFE2L2Q16236 605 aa17.51■□□□□ 0.39
THBS3-202ENST00000428962 C8orf34Q49A92 452 aa17.51■□□□□ 0.39
THBS3-202ENST00000428962 ZNF428Q96B54 188 aa17.51■□□□□ 0.39
THBS3-202ENST00000428962 EMILIN1Q9Y6C2 1016 aa17.51■□□□□ 0.39
THBS3-202ENST00000428962 KIF16BQ96L93 1317 aa17.51■□□□□ 0.39
THBS3-202ENST00000428962 PRR36Q9H6K5 1346 aa17.51■□□□□ 0.39
THBS3-202ENST00000428962 LTKP29376 864 aa17.5■□□□□ 0.39
THBS3-202ENST00000428962 LMOD3Q0VAK6 560 aa17.5■□□□□ 0.39
THBS3-202ENST00000428962 RWDD1Q9H446 243 aaPredicted RBP17.5■□□□□ 0.39
THBS3-202ENST00000428962 CEP170BQ9Y4F5 1589 aaPredicted RBP17.5■□□□□ 0.39
THBS3-202ENST00000428962 PTCH1Q13635 1447 aa17.5■□□□□ 0.39
THBS3-202ENST00000428962 IPO8O15397 1037 aaKnown RBP17.49■□□□□ 0.39
THBS3-202ENST00000428962 ALDH1L2Q3SY69 923 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms