RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 TRIM29Q14134 588 aa23.83■■□□□ 1.41
HCG18-235ENST00000426882 RRS1Q15050 365 aaKnown RBP23.83■■□□□ 1.41
HCG18-235ENST00000426882 CHD1LQ86WJ1 897 aa23.83■■□□□ 1.41
HCG18-235ENST00000426882 ATF3P18847 181 aa23.83■■□□□ 1.41
HCG18-235ENST00000426882 NASPP49321 788 aaPredicted RBP23.82■■□□□ 1.4
HCG18-235ENST00000426882 G3V3G9 751 aa23.82■■□□□ 1.4
HCG18-235ENST00000426882 PLEKHO1Q53GL0 409 aaPredicted RBP23.82■■□□□ 1.4
HCG18-235ENST00000426882 DCAF8Q5TAQ9 597 aa23.82■■□□□ 1.4
HCG18-235ENST00000426882 FSD1Q9BTV5 496 aa23.82■■□□□ 1.4
HCG18-235ENST00000426882 ESCO1Q5FWF5 840 aa23.81■■□□□ 1.4
HCG18-235ENST00000426882 FAM43AQ8N2R8 423 aa23.81■■□□□ 1.4
HCG18-235ENST00000426882 CCT4P50991 539 aaKnown RBP23.81■■□□□ 1.4
HCG18-235ENST00000426882 SKAP1Q86WV1 359 aa23.81■■□□□ 1.4
HCG18-235ENST00000426882 TPD52L1Q16890 204 aaPredicted RBP23.8■■□□□ 1.4
HCG18-235ENST00000426882 ZNF428Q96B54 188 aa23.8■■□□□ 1.4
HCG18-235ENST00000426882 BRPF3Q9ULD4 1205 aa23.8■■□□□ 1.4
HCG18-235ENST00000426882 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.8■■□□□ 1.4
HCG18-235ENST00000426882 KIF14Q15058 1648 aa23.8■■□□□ 1.4
HCG18-235ENST00000426882 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.8■■□□□ 1.4
HCG18-235ENST00000426882 TPM3P06753 285 aa23.8■■□□□ 1.4
HCG18-235ENST00000426882 CAVIN1Q6NZI2 390 aaKnown RBP23.8■■□□□ 1.4
HCG18-235ENST00000426882 PTPRKQ15262 1439 aa23.8■■□□□ 1.4
HCG18-235ENST00000426882 MAPKBP1O60336 1514 aa23.79■■□□□ 1.4
HCG18-235ENST00000426882 PES1O00541 588 aaKnown RBP23.79■■□□□ 1.4
HCG18-235ENST00000426882 MCM2P49736 904 aa23.79■■□□□ 1.4
HCG18-235ENST00000426882 TMEM57Q8N5G2 664 aa23.79■■□□□ 1.4
HCG18-235ENST00000426882 NFE2L2Q16236 605 aa23.79■■□□□ 1.4
HCG18-235ENST00000426882 FOSBP53539 338 aa23.79■■□□□ 1.4
HCG18-235ENST00000426882 AMER1Q5JTC6 1135 aaPredicted RBP23.79■■□□□ 1.4
HCG18-235ENST00000426882 RNF214Q8ND24 703 aa23.79■■□□□ 1.4
HCG18-235ENST00000426882 ADGRF5Q8IZF2 1346 aa23.78■■□□□ 1.4
HCG18-235ENST00000426882 RARSP54136 660 aaKnown RBP23.78■■□□□ 1.4
HCG18-235ENST00000426882 SLC26A8Q96RN1 970 aa23.78■■□□□ 1.4
HCG18-235ENST00000426882 MARCH6O60337 910 aa23.78■■□□□ 1.4
HCG18-235ENST00000426882 PSMA5P28066 241 aa23.77■■□□□ 1.4
HCG18-235ENST00000426882 SASS6Q6UVJ0 657 aa23.77■■□□□ 1.4
HCG18-235ENST00000426882 PRPF40AO75400 957 aaKnown RBP23.76■■□□□ 1.39
HCG18-235ENST00000426882 WASHC4Q2M389 1173 aa23.76■■□□□ 1.39
HCG18-235ENST00000426882 CCDC73Q6ZRK6 1079 aa23.76■■□□□ 1.39
HCG18-235ENST00000426882 THUMPD2Q9BTF0 503 aaKnown RBP23.76■■□□□ 1.39
HCG18-235ENST00000426882 CCDC61Q9Y6R9 512 aa23.76■■□□□ 1.39
HCG18-235ENST00000426882 MSH5O43196 834 aa23.76■■□□□ 1.39
HCG18-235ENST00000426882 MBD3O95983 291 aa23.76■■□□□ 1.39
HCG18-235ENST00000426882 ZNF592Q92610 1267 aa23.76■■□□□ 1.39
HCG18-235ENST00000426882 LRRCC1Q9C099 1032 aa23.76■■□□□ 1.39
HCG18-235ENST00000426882 RALYLQ86SE5 291 aaKnown RBP23.75■■□□□ 1.39
HCG18-235ENST00000426882 NFXL1Q6ZNB6 911 aa23.75■■□□□ 1.39
HCG18-235ENST00000426882 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.74■■□□□ 1.39
HCG18-235ENST00000426882 THEMISQ8N1K5 641 aaPredicted RBP23.74■■□□□ 1.39
HCG18-235ENST00000426882 K7ELQ4 463 aaPredicted RBP23.74■■□□□ 1.39
HCG18-235ENST00000426882 SSH1Q8WYL5 1049 aa23.74■■□□□ 1.39
HCG18-235ENST00000426882 SRCIN1Q9C0H9 1055 aa23.74■■□□□ 1.39
HCG18-235ENST00000426882 CCDC27Q2M243 656 aa23.73■■□□□ 1.39
HCG18-235ENST00000426882 NUDT16Q96DE0 195 aaKnown RBP23.73■■□□□ 1.39
HCG18-235ENST00000426882 THOC2Q8NI27 1593 aaKnown RBP23.73■■□□□ 1.39
HCG18-235ENST00000426882 DUSP27Q5VZP5 1158 aa23.73■■□□□ 1.39
HCG18-235ENST00000426882 NKTRP30414 1462 aaKnown RBP23.73■■□□□ 1.39
HCG18-235ENST00000426882 ZNF530Q6P9A1 599 aaPredicted RBP23.72■■□□□ 1.39
HCG18-235ENST00000426882 VPS37DQ86XT2 251 aa23.72■■□□□ 1.39
HCG18-235ENST00000426882 ZNF608Q9ULD9 1512 aaPredicted RBP23.71■■□□□ 1.39
HCG18-235ENST00000426882 WAPLQ7Z5K2 1190 aa23.71■■□□□ 1.39
HCG18-235ENST00000426882 DISP3Q9P2K9 1392 aa23.71■■□□□ 1.39
HCG18-235ENST00000426882 ERC1Q8IUD2 1116 aa23.71■■□□□ 1.39
HCG18-235ENST00000426882 NOC3LQ8WTT2 800 aaKnown RBP23.71■■□□□ 1.39
HCG18-235ENST00000426882 FBXW7Q969H0 707 aa23.71■■□□□ 1.39
HCG18-235ENST00000426882 TSR1Q2NL82 804 aaKnown RBP23.7■■□□□ 1.38
HCG18-235ENST00000426882 RPAP2Q8IXW5 612 aaPredicted RBP23.7■■□□□ 1.38
HCG18-235ENST00000426882 FAM13BQ9NYF5 915 aa23.7■■□□□ 1.38
HCG18-235ENST00000426882 TPM1P09493 284 aa23.7■■□□□ 1.38
HCG18-235ENST00000426882 DNAJC2Q99543 621 aaKnown RBP23.7■■□□□ 1.38
HCG18-235ENST00000426882 GPATCH8Q9UKJ3 1502 aaKnown RBP23.69■■□□□ 1.38
HCG18-235ENST00000426882 CCAR2Q8N163 923 aaKnown RBP23.69■■□□□ 1.38
HCG18-235ENST00000426882 CWC22Q9HCG8 908 aaKnown RBP23.69■■□□□ 1.38
HCG18-235ENST00000426882 HIP1O00291 1037 aa23.68■■□□□ 1.38
HCG18-235ENST00000426882 PROSER2Q86WR7 435 aaPredicted RBP23.68■■□□□ 1.38
HCG18-235ENST00000426882 GOLGA6L1Q8N7Z2 621 aa23.68■■□□□ 1.38
HCG18-235ENST00000426882 SCAF11Q99590 1463 aaKnown RBP23.68■■□□□ 1.38
HCG18-235ENST00000426882 ADGRL1O94910 1474 aa23.67■■□□□ 1.38
HCG18-235ENST00000426882 VPS53Q5VIR6 699 aa23.67■■□□□ 1.38
HCG18-235ENST00000426882 ERICH2A1L162 156 aa23.67■■□□□ 1.38
HCG18-235ENST00000426882 IL27Q8NEV9 243 aa23.67■■□□□ 1.38
HCG18-235ENST00000426882 PDCP20941 246 aa23.67■■□□□ 1.38
HCG18-235ENST00000426882 LRPPRCP42704 1394 aaKnown RBP23.67■■□□□ 1.38
HCG18-235ENST00000426882 MCM4P33991 863 aa23.67■■□□□ 1.38
HCG18-235ENST00000426882 FIBPO43427 364 aa23.66■■□□□ 1.38
HCG18-235ENST00000426882 NOL10Q9BSC4 688 aaKnown RBP23.66■■□□□ 1.38
HCG18-235ENST00000426882 AMOTL1Q8IY63 956 aa23.66■■□□□ 1.38
HCG18-235ENST00000426882 ABCC11Q96J66 1382 aa23.66■■□□□ 1.38
HCG18-235ENST00000426882 HOOK1Q9UJC3 728 aaKnown RBP23.66■■□□□ 1.38
HCG18-235ENST00000426882 SAFBQ15424 915 aaKnown RBP eCLIP23.65■■□□□ 1.38
HCG18-235ENST00000426882 CD109Q6YHK3 1445 aa23.65■■□□□ 1.38
HCG18-235ENST00000426882 CCDC39Q9UFE4 941 aa23.65■■□□□ 1.38
HCG18-235ENST00000426882 TATP17735 454 aaPredicted RBP23.65■■□□□ 1.38
HCG18-235ENST00000426882 DCTN1Q14203 1278 aa23.65■■□□□ 1.38
HCG18-235ENST00000426882 SRGAP3O43295 1099 aa23.64■■□□□ 1.38
HCG18-235ENST00000426882 SDF4Q9BRK5 362 aa23.64■■□□□ 1.38
HCG18-235ENST00000426882 CIZ1Q9ULV3 898 aaPredicted RBP23.64■■□□□ 1.37
HCG18-235ENST00000426882 UGGT2Q9NYU1 1516 aa23.64■■□□□ 1.37
HCG18-235ENST00000426882 MAP4K4O95819 1239 aaPredicted RBP23.63■■□□□ 1.37
HCG18-235ENST00000426882 ALDH1L2Q3SY69 923 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms