RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 EPAS1Q99814 870 aa9.68□□□□□ -0.86
NIF3L1-207ENST00000426253 PZPP20742 1482 aa9.67□□□□□ -0.86
NIF3L1-207ENST00000426253 MIA2Q96PC5 1412 aa9.67□□□□□ -0.86
NIF3L1-207ENST00000426253 CCNB3Q8WWL7 1395 aa9.67□□□□□ -0.86
NIF3L1-207ENST00000426253 IRF6O14896 467 aa9.67□□□□□ -0.86
NIF3L1-207ENST00000426253 PROSER2Q86WR7 435 aaPredicted RBP9.67□□□□□ -0.86
NIF3L1-207ENST00000426253 NGLY1Q96IV0 654 aa9.67□□□□□ -0.86
NIF3L1-207ENST00000426253 SLAIN2Q9P270 581 aa9.67□□□□□ -0.86
NIF3L1-207ENST00000426253 MAP3K1Q13233 1512 aa9.66□□□□□ -0.86
NIF3L1-207ENST00000426253 MSH6P52701 1360 aa9.66□□□□□ -0.86
NIF3L1-207ENST00000426253 PRIM1P49642 420 aaKnown RBP9.66□□□□□ -0.86
NIF3L1-207ENST00000426253 CCDC125Q86Z20 511 aa9.66□□□□□ -0.86
NIF3L1-207ENST00000426253 C8orf37Q96NL8 207 aa9.66□□□□□ -0.86
NIF3L1-207ENST00000426253 PCDHGA4Q9Y5G9 962 aa9.66□□□□□ -0.86
NIF3L1-207ENST00000426253 GPATCH8Q9UKJ3 1502 aaKnown RBP9.66□□□□□ -0.86
NIF3L1-207ENST00000426253 SCAF11Q99590 1463 aaKnown RBP9.66□□□□□ -0.86
NIF3L1-207ENST00000426253 PTGDRQ13258 359 aa9.65□□□□□ -0.86
NIF3L1-207ENST00000426253 KDM4CQ9H3R0 1056 aa9.64□□□□□ -0.87
NIF3L1-207ENST00000426253 GPBP1L1Q9HC44 474 aaPredicted RBP9.64□□□□□ -0.87
NIF3L1-207ENST00000426253 ZNF644Q9H582 1327 aaPredicted RBP9.63□□□□□ -0.87
NIF3L1-207ENST00000426253 SYCP2Q9BX26 1530 aa9.63□□□□□ -0.87
NIF3L1-207ENST00000426253 EN1Q05925 392 aaPredicted RBP9.63□□□□□ -0.87
NIF3L1-207ENST00000426253 VPS8Q8N3P4 1428 aa9.63□□□□□ -0.87
NIF3L1-207ENST00000426253 TIAM1Q13009 1591 aa9.63□□□□□ -0.87
NIF3L1-207ENST00000426253 NWD1Q149M9 1564 aa9.63□□□□□ -0.87
NIF3L1-207ENST00000426253 INO80Q9ULG1 1556 aaPredicted RBP9.63□□□□□ -0.87
NIF3L1-207ENST00000426253 ADGBQ8N7X0 1667 aa9.62□□□□□ -0.87
NIF3L1-207ENST00000426253 PSDA5PKW4 1024 aaPredicted RBP9.62□□□□□ -0.87
NIF3L1-207ENST00000426253 TXNDC2Q86VQ3 553 aa9.62□□□□□ -0.87
NIF3L1-207ENST00000426253 CCDC102AQ96A19 550 aa9.62□□□□□ -0.87
NIF3L1-207ENST00000426253 TIMELESSQ9UNS1 1208 aa9.62□□□□□ -0.87
NIF3L1-207ENST00000426253 NHSL1Q5SYE7 1610 aa9.62□□□□□ -0.87
NIF3L1-207ENST00000426253 WASHC2CQ9Y4E1 1318 aa9.61□□□□□ -0.87
NIF3L1-207ENST00000426253 AMHR2Q16671 573 aa9.61□□□□□ -0.87
NIF3L1-207ENST00000426253 KANK4Q5T7N3 995 aaPredicted RBP9.61□□□□□ -0.87
NIF3L1-207ENST00000426253 SLAIN1Q8ND83 568 aa9.61□□□□□ -0.87
NIF3L1-207ENST00000426253 PCDHGA10Q9Y5H3 936 aa9.61□□□□□ -0.87
NIF3L1-207ENST00000426253 CDC42BPAQ5VT25 1732 aa9.61□□□□□ -0.87
NIF3L1-207ENST00000426253 KIAA1107Q9UPP5 1409 aa9.6□□□□□ -0.87
NIF3L1-207ENST00000426253 FECHP22830 423 aa9.6□□□□□ -0.87
NIF3L1-207ENST00000426253 TYW1BQ6NUM6 668 aa9.6□□□□□ -0.87
NIF3L1-207ENST00000426253 NPDC1Q9NQX5 325 aaPredicted RBP9.6□□□□□ -0.87
NIF3L1-207ENST00000426253 PRDM15P57071 1507 aaPredicted RBP9.6□□□□□ -0.87
NIF3L1-207ENST00000426253 KCNA6P17658 529 aa9.59□□□□□ -0.87
NIF3L1-207ENST00000426253 HRCP23327 699 aa9.59□□□□□ -0.87
NIF3L1-207ENST00000426253 LTKP29376 864 aa9.59□□□□□ -0.87
NIF3L1-207ENST00000426253 RSPH4AQ5TD94 716 aa9.59□□□□□ -0.87
NIF3L1-207ENST00000426253 DEFB132Q7Z7B7 95 aa9.59□□□□□ -0.87
NIF3L1-207ENST00000426253 FBXW7Q969H0 707 aa9.59□□□□□ -0.87
NIF3L1-207ENST00000426253 EID1Q9Y6B2 187 aa9.59□□□□□ -0.87
NIF3L1-207ENST00000426253 EHBP1L1Q8N3D4 1523 aa9.59□□□□□ -0.87
NIF3L1-207ENST00000426253 AHDC1Q5TGY3 1603 aaPredicted RBP9.59□□□□□ -0.87
NIF3L1-207ENST00000426253 PLEKHH2Q8IVE3 1493 aa9.59□□□□□ -0.87
NIF3L1-207ENST00000426253 EP400Q96L91 3159 aa9.58□□□□□ -0.88
NIF3L1-207ENST00000426253 MAP3K7O43318 606 aa9.58□□□□□ -0.88
NIF3L1-207ENST00000426253 SF3B2Q13435 895 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-207ENST00000426253 UBR1Q8IWV7 1749 aa9.58□□□□□ -0.88
NIF3L1-207ENST00000426253 NCOA2Q15596 1464 aa9.58□□□□□ -0.88
NIF3L1-207ENST00000426253 KDM5AP29375 1690 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-207ENST00000426253 KIF3BO15066 747 aa9.57□□□□□ -0.88
NIF3L1-207ENST00000426253 POTEJP0CG39 1038 aa9.57□□□□□ -0.88
NIF3L1-207ENST00000426253 TSPY4P0CV99 314 aa9.57□□□□□ -0.88
NIF3L1-207ENST00000426253 TSPY10P0CW01 314 aa9.57□□□□□ -0.88
NIF3L1-207ENST00000426253 DOK7Q18PE1 504 aa9.57□□□□□ -0.88
NIF3L1-207ENST00000426253 IL27Q8NEV9 243 aa9.57□□□□□ -0.88
NIF3L1-207ENST00000426253 BLMP54132 1417 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-207ENST00000426253 ABCC3O15438 1527 aa9.56□□□□□ -0.88
NIF3L1-207ENST00000426253 DIP2AQ14689 1571 aa9.56□□□□□ -0.88
NIF3L1-207ENST00000426253 NKTRP30414 1462 aaKnown RBP9.56□□□□□ -0.88
NIF3L1-207ENST00000426253 FOSBP53539 338 aa9.56□□□□□ -0.88
NIF3L1-207ENST00000426253 C14orf37Q86TY3 774 aa9.56□□□□□ -0.88
NIF3L1-207ENST00000426253 ZSWIM6Q9HCJ5 1215 aa9.56□□□□□ -0.88
NIF3L1-207ENST00000426253 ADAMTS2O95450 1211 aa9.55□□□□□ -0.88
NIF3L1-207ENST00000426253 MAMSTRQ6ZN01 415 aa9.55□□□□□ -0.88
NIF3L1-207ENST00000426253 SLC26A8Q96RN1 970 aa9.55□□□□□ -0.88
NIF3L1-207ENST00000426253 USP21Q9UK80 565 aa9.55□□□□□ -0.88
NIF3L1-207ENST00000426253 TRPC5Q9UL62 973 aaPredicted RBP9.55□□□□□ -0.88
NIF3L1-207ENST00000426253 MBD5Q9P267 1494 aa9.54□□□□□ -0.88
NIF3L1-207ENST00000426253 RIMBP2O15034 1052 aa9.54□□□□□ -0.88
NIF3L1-207ENST00000426253 HOXB3P14651 431 aaPredicted RBP9.54□□□□□ -0.88
NIF3L1-207ENST00000426253 CDHR5Q9HBB8 845 aa9.54□□□□□ -0.88
NIF3L1-207ENST00000426253 SLIT1O75093 1534 aa9.54□□□□□ -0.88
NIF3L1-207ENST00000426253 ARHGAP23Q9P227 1491 aa9.53□□□□□ -0.88
NIF3L1-207ENST00000426253 POTEB2H3BUK9 544 aa9.53□□□□□ -0.88
NIF3L1-207ENST00000426253 C1QTNF8P60827 252 aa9.53□□□□□ -0.88
NIF3L1-207ENST00000426253 PARP9Q8IXQ6 854 aa9.53□□□□□ -0.88
NIF3L1-207ENST00000426253 DDRGK1Q96HY6 314 aa9.53□□□□□ -0.88
NIF3L1-207ENST00000426253 RTEL1-TNFRSF6BF6WH68 1400 aa9.52□□□□□ -0.89
NIF3L1-207ENST00000426253 TSR1Q2NL82 804 aaKnown RBP9.52□□□□□ -0.89
NIF3L1-207ENST00000426253 GPR153Q6NV75 609 aa9.52□□□□□ -0.89
NIF3L1-207ENST00000426253 ZDHHC16Q969W1 377 aa9.52□□□□□ -0.89
NIF3L1-207ENST00000426253 FAM117AQ9C073 453 aa9.52□□□□□ -0.89
NIF3L1-207ENST00000426253 SCUBE2Q9NQ36 999 aa9.52□□□□□ -0.89
NIF3L1-207ENST00000426253 DHX29Q7Z478 1369 aaKnown RBP9.51□□□□□ -0.89
NIF3L1-207ENST00000426253 ARSIQ5FYB1 569 aa9.51□□□□□ -0.89
NIF3L1-207ENST00000426253 C6orf132Q5T0Z8 1188 aa9.51□□□□□ -0.89
NIF3L1-207ENST00000426253 ERVK-7P63135 1459 aa9.51□□□□□ -0.89
NIF3L1-207ENST00000426253 BCL9LQ86UU0 1499 aa9.51□□□□□ -0.89
NIF3L1-207ENST00000426253 NUDT7P0C024 238 aa9.5□□□□□ -0.89
NIF3L1-207ENST00000426253 ATF3P18847 181 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms