RNA–Protein interactions for RNA: ENST00000415585.6

CSTF2-203, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 1 (best) BASIC

Gene CSTF2, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-203ENST00000415585 MED14O60244 1454 aa17.07■□□□□ 0.32
CSTF2-203ENST00000415585 USP19O94966 1318 aa17.07■□□□□ 0.32
CSTF2-203ENST00000415585 MINK1Q8N4C8 1332 aaPredicted RBP17.07■□□□□ 0.32
CSTF2-203ENST00000415585 PLEKHF1Q96S99 279 aa17.07■□□□□ 0.32
CSTF2-203ENST00000415585 NLRP1Q9C000 1473 aa17.07■□□□□ 0.32
CSTF2-203ENST00000415585 NFKBIBQ15653 356 aa17.06■□□□□ 0.32
CSTF2-203ENST00000415585 PRAM1Q96QH2 718 aa17.06■□□□□ 0.32
CSTF2-203ENST00000415585 PPP6R1Q9UPN7 881 aa17.06■□□□□ 0.32
CSTF2-203ENST00000415585 TERF2IPQ9NYB0 399 aa17.06■□□□□ 0.32
CSTF2-203ENST00000415585 U2SURPO15042 1029 aaKnown RBP17.05■□□□□ 0.32
CSTF2-203ENST00000415585 FYB1O15117 783 aa17.05■□□□□ 0.32
CSTF2-203ENST00000415585 CT47B1P0C2W7 299 aaPredicted RBP17.05■□□□□ 0.32
CSTF2-203ENST00000415585 POGKQ9P215 609 aa17.05■□□□□ 0.32
CSTF2-203ENST00000415585 ALKQ9UM73 1620 aa17.04■□□□□ 0.32
CSTF2-203ENST00000415585 KIF20BQ96Q89 1820 aa17.04■□□□□ 0.32
CSTF2-203ENST00000415585 SEC24BO95487 1268 aa17.04■□□□□ 0.32
CSTF2-203ENST00000415585 TMPOP42166 694 aaKnown RBP17.04■□□□□ 0.32
CSTF2-203ENST00000415585 TSR2Q969E8 191 aaKnown RBP17.04■□□□□ 0.32
CSTF2-203ENST00000415585 MVPQ14764 893 aaKnown RBP17.03■□□□□ 0.32
CSTF2-203ENST00000415585 ZKSCAN2Q63HK3 967 aa17.03■□□□□ 0.32
CSTF2-203ENST00000415585 TRIM35Q9UPQ4 493 aa17.03■□□□□ 0.32
CSTF2-203ENST00000415585 ZMYM3Q14202 1370 aa17.02■□□□□ 0.32
CSTF2-203ENST00000415585 RWDD1Q9H446 243 aaPredicted RBP17.02■□□□□ 0.32
CSTF2-203ENST00000415585 PDZRN3Q9UPQ7 1066 aa17.02■□□□□ 0.32
CSTF2-203ENST00000415585 EXOSC9Q06265 439 aaKnown RBP17.01■□□□□ 0.31
CSTF2-203ENST00000415585 DZIP1LQ8IYY4 767 aaKnown RBP17.01■□□□□ 0.31
CSTF2-203ENST00000415585 FTSJ3Q8IY81 847 aaKnown RBP17■□□□□ 0.31
CSTF2-203ENST00000415585 HDGFL2Q7Z4V5 671 aaPredicted RBP17■□□□□ 0.31
CSTF2-203ENST00000415585 CDK19Q9BWU1 502 aa17■□□□□ 0.31
CSTF2-203ENST00000415585 SMC4Q9NTJ3 1288 aa17■□□□□ 0.31
CSTF2-203ENST00000415585 PNPLA6Q8IY17 1366 aa16.99■□□□□ 0.31
CSTF2-203ENST00000415585 IL16Q14005 1332 aa16.99■□□□□ 0.31
CSTF2-203ENST00000415585 DIAPH1O60610 1272 aaKnown RBP16.98■□□□□ 0.31
CSTF2-203ENST00000415585 TRIM27P14373 513 aa16.97■□□□□ 0.31
CSTF2-203ENST00000415585 SSH1Q8WYL5 1049 aa16.97■□□□□ 0.31
CSTF2-203ENST00000415585 CABP1Q9NZU7 370 aa16.97■□□□□ 0.31
CSTF2-203ENST00000415585 CDC42BPGQ6DT37 1551 aa16.97■□□□□ 0.31
CSTF2-203ENST00000415585 SPATA31D1Q6ZQQ2 1576 aa16.97■□□□□ 0.31
CSTF2-203ENST00000415585 RIPK4P57078 832 aa16.97■□□□□ 0.31
CSTF2-203ENST00000415585 ESF1Q9H501 851 aaKnown RBP16.97■□□□□ 0.31
CSTF2-203ENST00000415585 GSE1Q14687 1217 aa16.96■□□□□ 0.31
CSTF2-203ENST00000415585 PNNQ9H307 717 aaKnown RBP16.95■□□□□ 0.3
CSTF2-203ENST00000415585 STAG3Q9UJ98 1225 aa16.95■□□□□ 0.3
CSTF2-203ENST00000415585 SETD1AO15047 1707 aaKnown RBP16.95■□□□□ 0.3
CSTF2-203ENST00000415585 LRRC7Q96NW7 1537 aa16.95■□□□□ 0.3
CSTF2-203ENST00000415585 DLC1Q96QB1 1528 aa16.95■□□□□ 0.3
CSTF2-203ENST00000415585 ATF7IPQ6VMQ6 1270 aa16.95■□□□□ 0.3
CSTF2-203ENST00000415585 MAP2P11137 1827 aaKnown RBP16.94■□□□□ 0.3
CSTF2-203ENST00000415585 FRAT2O75474 233 aaPredicted RBP16.93■□□□□ 0.3
CSTF2-203ENST00000415585 DDX19BQ9UMR2 479 aa16.93■□□□□ 0.3
CSTF2-203ENST00000415585 CEBPAP49715 358 aaPredicted RBP16.93■□□□□ 0.3
CSTF2-203ENST00000415585 BECN1Q14457 450 aa16.93■□□□□ 0.3
CSTF2-203ENST00000415585 NOB1Q9ULX3 412 aaKnown RBP16.93■□□□□ 0.3
CSTF2-203ENST00000415585 ATP7BP35670 1465 aa16.93■□□□□ 0.3
CSTF2-203ENST00000415585 A2ML1A8K2U0 1454 aa16.92■□□□□ 0.3
CSTF2-203ENST00000415585 HDAC1Q13547 482 aaPredicted RBP16.92■□□□□ 0.3
CSTF2-203ENST00000415585 ITPRIPQ8IWB1 547 aa16.92■□□□□ 0.3
CSTF2-203ENST00000415585 TBC1D32Q96NH3 1257 aa16.92■□□□□ 0.3
CSTF2-203ENST00000415585 UPF2Q9HAU5 1272 aaKnown RBP16.92■□□□□ 0.3
CSTF2-203ENST00000415585 FCHSD2O94868 740 aa16.92■□□□□ 0.3
CSTF2-203ENST00000415585 FAM135BQ49AJ0 1406 aa16.91■□□□□ 0.3
CSTF2-203ENST00000415585 WAPLQ7Z5K2 1190 aa16.91■□□□□ 0.3
CSTF2-203ENST00000415585 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.91■□□□□ 0.3
CSTF2-203ENST00000415585 RSPH6AQ9H0K4 717 aa16.9■□□□□ 0.3
CSTF2-203ENST00000415585 POLKQ9UBT6 870 aa16.9■□□□□ 0.3
CSTF2-203ENST00000415585 KIF16BQ96L93 1317 aa16.9■□□□□ 0.3
CSTF2-203ENST00000415585 TMEM57Q8N5G2 664 aa16.9■□□□□ 0.3
CSTF2-203ENST00000415585 RIMS2Q9UQ26 1411 aa16.89■□□□□ 0.3
CSTF2-203ENST00000415585 FBLN1P23142 703 aa16.89■□□□□ 0.29
CSTF2-203ENST00000415585 PRKAR2BP31323 418 aa16.89■□□□□ 0.29
CSTF2-203ENST00000415585 ALDH1L2Q3SY69 923 aa16.88■□□□□ 0.29
CSTF2-203ENST00000415585 PLPPR3Q6T4P5 718 aa16.88■□□□□ 0.29
CSTF2-203ENST00000415585 IPO8O15397 1037 aaKnown RBP16.87■□□□□ 0.29
CSTF2-203ENST00000415585 ZBTB40Q9NUA8 1239 aa16.87■□□□□ 0.29
CSTF2-203ENST00000415585 SMC5Q8IY18 1101 aa16.87■□□□□ 0.29
CSTF2-203ENST00000415585 IL27Q8NEV9 243 aa16.87■□□□□ 0.29
CSTF2-203ENST00000415585 TNRQ92752 1358 aa16.87■□□□□ 0.29
CSTF2-203ENST00000415585 NRXN3Q9Y4C0 1643 aa16.86■□□□□ 0.29
CSTF2-203ENST00000415585 PPIP5K1Q6PFW1 1433 aa16.86■□□□□ 0.29
CSTF2-203ENST00000415585 CPSF1Q10570 1443 aaKnown RBP16.85■□□□□ 0.29
CSTF2-203ENST00000415585 SLKQ9H2G2 1235 aaPredicted RBP16.85■□□□□ 0.29
CSTF2-203ENST00000415585 EDC4Q6P2E9 1401 aaKnown RBP16.85■□□□□ 0.29
CSTF2-203ENST00000415585 NFE2L2Q16236 605 aa16.84■□□□□ 0.29
CSTF2-203ENST00000415585 PHACTR3Q96KR7 559 aa16.84■□□□□ 0.29
CSTF2-203ENST00000415585 TBC1D2Q9BYX2 928 aa16.84■□□□□ 0.29
CSTF2-203ENST00000415585 HMOX1P09601 288 aa16.84■□□□□ 0.29
CSTF2-203ENST00000415585 BRPF1P55201 1214 aaPredicted RBP16.84■□□□□ 0.29
CSTF2-203ENST00000415585 ANTXR1Q9H6X2 564 aa16.84■□□□□ 0.29
CSTF2-203ENST00000415585 ZNF428Q96B54 188 aa16.83■□□□□ 0.28
CSTF2-203ENST00000415585 EMILIN1Q9Y6C2 1016 aa16.83■□□□□ 0.28
CSTF2-203ENST00000415585 CDK12Q9NYV4 1490 aaPredicted RBP16.83■□□□□ 0.28
CSTF2-203ENST00000415585 DLG5Q8TDM6 1919 aa16.82■□□□□ 0.28
CSTF2-203ENST00000415585 WASLO00401 505 aaPredicted RBP16.82■□□□□ 0.28
CSTF2-203ENST00000415585 MON2Q7Z3U7 1717 aa16.82■□□□□ 0.28
CSTF2-203ENST00000415585 IL13P35225 146 aa16.81■□□□□ 0.28
CSTF2-203ENST00000415585 NME9Q86XW9 330 aa16.81■□□□□ 0.28
CSTF2-203ENST00000415585 THUMPD2Q9BTF0 503 aaKnown RBP16.81■□□□□ 0.28
CSTF2-203ENST00000415585 C22orf23Q9BZE7 217 aa16.81■□□□□ 0.28
CSTF2-203ENST00000415585 KNDC1Q76NI1 1749 aa16.8■□□□□ 0.28
CSTF2-203ENST00000415585 METP08581 1390 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms