RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 HAX1O00165 279 aa13.87□□□□□ -0.19
LINC01090-201ENST00000415357 NBPF1Q3BBV0 1214 aa13.87□□□□□ -0.19
LINC01090-201ENST00000415357 LRRC59Q96AG4 307 aaKnown RBP13.87□□□□□ -0.19
LINC01090-201ENST00000415357 PXDNQ92626 1479 aa13.87□□□□□ -0.19
LINC01090-201ENST00000415357 USP32Q8NFA0 1604 aa13.86□□□□□ -0.19
LINC01090-201ENST00000415357 FOXO3O43524 673 aa13.86□□□□□ -0.19
LINC01090-201ENST00000415357 CD44P16070 742 aaKnown RBP13.86□□□□□ -0.19
LINC01090-201ENST00000415357 MEX3CQ5U5Q3 659 aaKnown RBP13.86□□□□□ -0.19
LINC01090-201ENST00000415357 TSPYL2Q9H2G4 693 aaPredicted RBP13.86□□□□□ -0.19
LINC01090-201ENST00000415357 NPHP3Q7Z494 1330 aa13.86□□□□□ -0.19
LINC01090-201ENST00000415357 KIF1AQ12756 1690 aa13.85□□□□□ -0.19
LINC01090-201ENST00000415357 POTEAQ6S8J7 498 aa13.85□□□□□ -0.19
LINC01090-201ENST00000415357 FAM212AQ96EL1 285 aa13.85□□□□□ -0.19
LINC01090-201ENST00000415357 SOCS7O14512 581 aa13.84□□□□□ -0.19
LINC01090-201ENST00000415357 PAK3O75914 559 aaPredicted RBP13.83□□□□□ -0.2
LINC01090-201ENST00000415357 CIZ1Q9ULV3 898 aaPredicted RBP13.83□□□□□ -0.2
LINC01090-201ENST00000415357 TRPM1Q7Z4N2 1603 aa13.82□□□□□ -0.2
LINC01090-201ENST00000415357 ANKARQ7Z5J8 1434 aa13.82□□□□□ -0.2
LINC01090-201ENST00000415357 C19orf67A6NJJ6 358 aa13.82□□□□□ -0.2
LINC01090-201ENST00000415357 DCAF8Q5TAQ9 597 aa13.82□□□□□ -0.2
LINC01090-201ENST00000415357 PHF8Q9UPP1 1060 aa13.82□□□□□ -0.2
LINC01090-201ENST00000415357 PRR36Q9H6K5 1346 aa13.82□□□□□ -0.2
LINC01090-201ENST00000415357 TULP4Q9NRJ4 1543 aa13.81□□□□□ -0.2
LINC01090-201ENST00000415357 WASLO00401 505 aaPredicted RBP13.81□□□□□ -0.2
LINC01090-201ENST00000415357 PMFBP1Q8TBY8 1022 aa13.81□□□□□ -0.2
LINC01090-201ENST00000415357 COL22A1Q8NFW1 1626 aaPredicted RBP13.81□□□□□ -0.2
LINC01090-201ENST00000415357 ADAMTS2O95450 1211 aa13.8□□□□□ -0.2
LINC01090-201ENST00000415357 KRT28Q7Z3Y7 464 aa13.79□□□□□ -0.2
LINC01090-201ENST00000415357 C8orf37Q96NL8 207 aa13.79□□□□□ -0.2
LINC01090-201ENST00000415357 ATP7BP35670 1465 aa13.79□□□□□ -0.2
LINC01090-201ENST00000415357 NBPF8Q3BBV2 869 aa13.78□□□□□ -0.2
LINC01090-201ENST00000415357 ZRANB1Q9UGI0 708 aa13.78□□□□□ -0.2
LINC01090-201ENST00000415357 AFF2P51816 1311 aa13.78□□□□□ -0.2
LINC01090-201ENST00000415357 EIF3AQ14152 1382 aaKnown RBP13.78□□□□□ -0.2
LINC01090-201ENST00000415357 GSE1Q14687 1217 aa13.77□□□□□ -0.21
LINC01090-201ENST00000415357 SPATA31A3Q5VYP0 1347 aa13.77□□□□□ -0.21
LINC01090-201ENST00000415357 TNS3Q68CZ2 1445 aa13.77□□□□□ -0.21
LINC01090-201ENST00000415357 TONSLQ96HA7 1378 aa13.77□□□□□ -0.21
LINC01090-201ENST00000415357 QRICH2Q9H0J4 1663 aa13.77□□□□□ -0.21
LINC01090-201ENST00000415357 ROCK2O75116 1388 aaKnown RBP13.76□□□□□ -0.21
LINC01090-201ENST00000415357 CENPJQ9HC77 1338 aaPredicted RBP13.76□□□□□ -0.21
LINC01090-201ENST00000415357 CDK19Q9BWU1 502 aa13.76□□□□□ -0.21
LINC01090-201ENST00000415357 ZNF772Q68DY9 489 aaPredicted RBP13.75□□□□□ -0.21
LINC01090-201ENST00000415357 NUDT16Q96DE0 195 aaKnown RBP13.75□□□□□ -0.21
LINC01090-201ENST00000415357 ITSN1Q15811 1721 aa13.75□□□□□ -0.21
LINC01090-201ENST00000415357 TRPM3Q9HCF6 1732 aaPredicted RBP13.75□□□□□ -0.21
LINC01090-201ENST00000415357 PSME1Q06323 249 aa13.74□□□□□ -0.21
LINC01090-201ENST00000415357 TOPAZ1Q8N9V7 1692 aa13.74□□□□□ -0.21
LINC01090-201ENST00000415357 SBNO1A3KN83 1393 aa13.73□□□□□ -0.21
LINC01090-201ENST00000415357 EVX2Q03828 476 aa13.73□□□□□ -0.21
LINC01090-201ENST00000415357 LMOD2Q6P5Q4 547 aa13.73□□□□□ -0.21
LINC01090-201ENST00000415357 NGLY1Q96IV0 654 aa13.73□□□□□ -0.21
LINC01090-201ENST00000415357 PCGF6Q9BYE7 350 aa13.73□□□□□ -0.21
LINC01090-201ENST00000415357 AMER1Q5JTC6 1135 aaPredicted RBP13.72□□□□□ -0.21
LINC01090-201ENST00000415357 NGDNQ8NEJ9 315 aaKnown RBP13.72□□□□□ -0.21
LINC01090-201ENST00000415357 CABLES1Q8TDN4 633 aa13.72□□□□□ -0.21
LINC01090-201ENST00000415357 ABCA3Q99758 1704 aa13.72□□□□□ -0.21
LINC01090-201ENST00000415357 MARF1Q9Y4F3 1742 aaKnown RBP13.72□□□□□ -0.21
LINC01090-201ENST00000415357 GPRASP1Q5JY77 1395 aa13.71□□□□□ -0.21
LINC01090-201ENST00000415357 RTN4Q9NQC3 1192 aaKnown RBP13.71□□□□□ -0.21
LINC01090-201ENST00000415357 RALGAPBQ86X10 1494 aa13.71□□□□□ -0.21
LINC01090-201ENST00000415357 ALS2Q96Q42 1657 aa13.71□□□□□ -0.21
LINC01090-201ENST00000415357 SRPK2P78362 688 aaKnown RBP13.7□□□□□ -0.22
LINC01090-201ENST00000415357 CABP2Q9NPB3 220 aa13.7□□□□□ -0.22
LINC01090-201ENST00000415357 CCDC61Q9Y6R9 512 aa13.7□□□□□ -0.22
LINC01090-201ENST00000415357 ARHGEF10O15013 1369 aa13.7□□□□□ -0.22
LINC01090-201ENST00000415357 USP21Q9UK80 565 aa13.69□□□□□ -0.22
LINC01090-201ENST00000415357 ACEP12821 1306 aa13.68□□□□□ -0.22
LINC01090-201ENST00000415357 PPIP5K1Q6PFW1 1433 aa13.68□□□□□ -0.22
LINC01090-201ENST00000415357 RXRBP28702 533 aa13.68□□□□□ -0.22
LINC01090-201ENST00000415357 HAP1P54257 671 aaPredicted RBP13.68□□□□□ -0.22
LINC01090-201ENST00000415357 CARD11Q9BXL7 1154 aa13.68□□□□□ -0.22
LINC01090-201ENST00000415357 QTRT2Q9H974 415 aaKnown RBP13.68□□□□□ -0.22
LINC01090-201ENST00000415357 PYGBP11216 843 aa13.67□□□□□ -0.22
LINC01090-201ENST00000415357 FNBP4Q8N3X1 1017 aaPredicted RBP13.67□□□□□ -0.22
LINC01090-201ENST00000415357 POLR3AO14802 1390 aaPredicted RBP13.67□□□□□ -0.22
LINC01090-201ENST00000415357 BCL9LQ86UU0 1499 aa13.67□□□□□ -0.22
LINC01090-201ENST00000415357 RGS12O14924 1447 aa13.66□□□□□ -0.22
LINC01090-201ENST00000415357 PHF12Q96QT6 1004 aa13.66□□□□□ -0.22
LINC01090-201ENST00000415357 CRYBG1Q9Y4K1 1723 aa13.66□□□□□ -0.22
LINC01090-201ENST00000415357 ATRNO75882 1429 aa13.65□□□□□ -0.22
LINC01090-201ENST00000415357 PLEKHG3A1L390 1219 aa13.65□□□□□ -0.22
LINC01090-201ENST00000415357 PLCH1Q4KWH8 1693 aa13.65□□□□□ -0.22
LINC01090-201ENST00000415357 EVC2Q86UK5 1308 aa13.64□□□□□ -0.23
LINC01090-201ENST00000415357 SLIT2O94813 1529 aa13.64□□□□□ -0.23
LINC01090-201ENST00000415357 CDK12Q9NYV4 1490 aaPredicted RBP13.64□□□□□ -0.23
LINC01090-201ENST00000415357 RBM6P78332 1123 aaKnown RBP13.64□□□□□ -0.23
LINC01090-201ENST00000415357 NUTM2GQ5VZR2 741 aa13.64□□□□□ -0.23
LINC01090-201ENST00000415357 ZNF579Q8NAF0 562 aaKnown RBP13.64□□□□□ -0.23
LINC01090-201ENST00000415357 TRPC5Q9UL62 973 aaPredicted RBP13.64□□□□□ -0.23
LINC01090-201ENST00000415357 ECM2O94769 699 aaPredicted RBP13.63□□□□□ -0.23
LINC01090-201ENST00000415357 CABP1Q9NZU7 370 aa13.63□□□□□ -0.23
LINC01090-201ENST00000415357 PHRF1Q9P1Y6 1649 aaKnown RBP13.63□□□□□ -0.23
LINC01090-201ENST00000415357 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.62□□□□□ -0.23
LINC01090-201ENST00000415357 UNC5CLQ8IV45 518 aa13.61□□□□□ -0.23
LINC01090-201ENST00000415357 SBNO2Q9Y2G9 1366 aa13.6□□□□□ -0.23
LINC01090-201ENST00000415357 FAM83GA6ND36 823 aa13.6□□□□□ -0.23
LINC01090-201ENST00000415357 GLI3P10071 1580 aa13.6□□□□□ -0.23
LINC01090-201ENST00000415357 USP6P35125 1406 aa13.6□□□□□ -0.23
LINC01090-201ENST00000415357 NRAPQ86VF7 1730 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms