RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 PLEKHF1Q96S99 279 aa21.29■■□□□ 1
COL23A1-202ENST00000407622 NLRP1Q9C000 1473 aa21.29■■□□□ 1
COL23A1-202ENST00000407622 MYH16Q9H6N6 1097 aa21.28■■□□□ 1
COL23A1-202ENST00000407622 STAG3Q9UJ98 1225 aa21.28■■□□□ 1
COL23A1-202ENST00000407622 SEC24BO95487 1268 aa21.28■■□□□ 1
COL23A1-202ENST00000407622 USP19O94966 1318 aa21.28■■□□□ 1
COL23A1-202ENST00000407622 POGKQ9P215 609 aa21.27■■□□□ 1
COL23A1-202ENST00000407622 USP35Q9P2H5 1018 aa21.27■■□□□ 1
COL23A1-202ENST00000407622 ATAD2Q6PL18 1390 aa21.26■□□□□ 0.99
COL23A1-202ENST00000407622 A2ML1A8K2U0 1454 aa21.26■□□□□ 0.99
COL23A1-202ENST00000407622 TRIM35Q9UPQ4 493 aa21.26■□□□□ 0.99
COL23A1-202ENST00000407622 ANKRD26Q9UPS8 1709 aa21.26■□□□□ 0.99
COL23A1-202ENST00000407622 ALKQ9UM73 1620 aa21.25■□□□□ 0.99
COL23A1-202ENST00000407622 TNRQ92752 1358 aa21.25■□□□□ 0.99
COL23A1-202ENST00000407622 TMPOP42166 694 aaKnown RBP21.25■□□□□ 0.99
COL23A1-202ENST00000407622 MAPK8IP3Q9UPT6 1336 aa21.24■□□□□ 0.99
COL23A1-202ENST00000407622 NCBP3Q53F19 620 aaKnown RBP21.24■□□□□ 0.99
COL23A1-202ENST00000407622 DAXXQ9UER7 740 aaPredicted RBP21.24■□□□□ 0.99
COL23A1-202ENST00000407622 CEBPAP49715 358 aaPredicted RBP21.23■□□□□ 0.99
COL23A1-202ENST00000407622 TERF2IPQ9NYB0 399 aa21.23■□□□□ 0.99
COL23A1-202ENST00000407622 EXOSC9Q06265 439 aaKnown RBP21.23■□□□□ 0.99
COL23A1-202ENST00000407622 PMFBP1Q8TBY8 1022 aa21.23■□□□□ 0.99
COL23A1-202ENST00000407622 CDK19Q9BWU1 502 aa21.23■□□□□ 0.99
COL23A1-202ENST00000407622 NFKBIBQ15653 356 aa21.22■□□□□ 0.99
COL23A1-202ENST00000407622 CABP1Q9NZU7 370 aa21.22■□□□□ 0.99
COL23A1-202ENST00000407622 PDZRN3Q9UPQ7 1066 aa21.21■□□□□ 0.99
COL23A1-202ENST00000407622 FBLN1P23142 703 aa21.21■□□□□ 0.99
COL23A1-202ENST00000407622 MVPQ14764 893 aaKnown RBP21.21■□□□□ 0.99
COL23A1-202ENST00000407622 MED14O60244 1454 aa21.2■□□□□ 0.98
COL23A1-202ENST00000407622 ZKSCAN2Q63HK3 967 aa21.2■□□□□ 0.98
COL23A1-202ENST00000407622 AAMPQ13685 434 aa21.18■□□□□ 0.98
COL23A1-202ENST00000407622 SMC4Q9NTJ3 1288 aa21.18■□□□□ 0.98
COL23A1-202ENST00000407622 KIF20BQ96Q89 1820 aa21.18■□□□□ 0.98
COL23A1-202ENST00000407622 WAPLQ7Z5K2 1190 aa21.18■□□□□ 0.98
COL23A1-202ENST00000407622 DZIP1LQ8IYY4 767 aaKnown RBP21.18■□□□□ 0.98
COL23A1-202ENST00000407622 SSH1Q8WYL5 1049 aa21.18■□□□□ 0.98
COL23A1-202ENST00000407622 HDGFL2Q7Z4V5 671 aaPredicted RBP21.17■□□□□ 0.98
COL23A1-202ENST00000407622 RIMS2Q9UQ26 1411 aa21.17■□□□□ 0.98
COL23A1-202ENST00000407622 FTSJ3Q8IY81 847 aaKnown RBP21.17■□□□□ 0.98
COL23A1-202ENST00000407622 FER1L4A9Z1Z3 1794 aa21.16■□□□□ 0.98
COL23A1-202ENST00000407622 DIAPH1O60610 1272 aaKnown RBP21.16■□□□□ 0.98
COL23A1-202ENST00000407622 TRIM27P14373 513 aa21.16■□□□□ 0.98
COL23A1-202ENST00000407622 RIPK4P57078 832 aa21.16■□□□□ 0.98
COL23A1-202ENST00000407622 PNPLA6Q8IY17 1366 aa21.16■□□□□ 0.98
COL23A1-202ENST00000407622 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.16■□□□□ 0.98
COL23A1-202ENST00000407622 C3P01024 1663 aa21.15■□□□□ 0.98
COL23A1-202ENST00000407622 RWDD1Q9H446 243 aaPredicted RBP21.15■□□□□ 0.98
COL23A1-202ENST00000407622 CT47B1P0C2W7 299 aaPredicted RBP21.14■□□□□ 0.97
COL23A1-202ENST00000407622 LRRC7Q96NW7 1537 aa21.13■□□□□ 0.97
COL23A1-202ENST00000407622 PLPPR3Q6T4P5 718 aa21.12■□□□□ 0.97
COL23A1-202ENST00000407622 NOB1Q9ULX3 412 aaKnown RBP21.12■□□□□ 0.97
COL23A1-202ENST00000407622 SETD1AO15047 1707 aaKnown RBP21.11■□□□□ 0.97
COL23A1-202ENST00000407622 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.11■□□□□ 0.97
COL23A1-202ENST00000407622 IL16Q14005 1332 aa21.11■□□□□ 0.97
COL23A1-202ENST00000407622 ATF7IPQ6VMQ6 1270 aa21.1■□□□□ 0.97
COL23A1-202ENST00000407622 ITPRIPQ8IWB1 547 aa21.1■□□□□ 0.97
COL23A1-202ENST00000407622 POLKQ9UBT6 870 aa21.1■□□□□ 0.97
COL23A1-202ENST00000407622 FRAT2O75474 233 aaPredicted RBP21.1■□□□□ 0.97
COL23A1-202ENST00000407622 TMEM2Q9UHN6 1383 aa21.09■□□□□ 0.97
COL23A1-202ENST00000407622 UBR1Q8IWV7 1749 aa21.09■□□□□ 0.97
COL23A1-202ENST00000407622 PRKAR2BP31323 418 aa21.09■□□□□ 0.97
COL23A1-202ENST00000407622 HDGFP51858 240 aaKnown RBP21.08■□□□□ 0.97
COL23A1-202ENST00000407622 RSPH6AQ9H0K4 717 aa21.08■□□□□ 0.97
COL23A1-202ENST00000407622 CDC42BPGQ6DT37 1551 aa21.08■□□□□ 0.96
COL23A1-202ENST00000407622 MAP2P11137 1827 aaKnown RBP21.08■□□□□ 0.96
COL23A1-202ENST00000407622 TMEM57Q8N5G2 664 aa21.07■□□□□ 0.96
COL23A1-202ENST00000407622 DLC1Q96QB1 1528 aa21.07■□□□□ 0.96
COL23A1-202ENST00000407622 FAM135BQ49AJ0 1406 aa21.06■□□□□ 0.96
COL23A1-202ENST00000407622 FCHSD2O94868 740 aa21.06■□□□□ 0.96
COL23A1-202ENST00000407622 HMOX1P09601 288 aa21.06■□□□□ 0.96
COL23A1-202ENST00000407622 PHACTR3Q96KR7 559 aa21.06■□□□□ 0.96
COL23A1-202ENST00000407622 ATP7BP35670 1465 aa21.06■□□□□ 0.96
COL23A1-202ENST00000407622 ZRANB1Q9UGI0 708 aa21.05■□□□□ 0.96
COL23A1-202ENST00000407622 DDX19BQ9UMR2 479 aa21.05■□□□□ 0.96
COL23A1-202ENST00000407622 EMILIN1Q9Y6C2 1016 aa21.05■□□□□ 0.96
COL23A1-202ENST00000407622 TBC1D32Q96NH3 1257 aa21.05■□□□□ 0.96
COL23A1-202ENST00000407622 THUMPD2Q9BTF0 503 aaKnown RBP21.05■□□□□ 0.96
COL23A1-202ENST00000407622 GSE1Q14687 1217 aa21.04■□□□□ 0.96
COL23A1-202ENST00000407622 NRXN3Q9Y4C0 1643 aa21.04■□□□□ 0.96
COL23A1-202ENST00000407622 NCKAP5LQ9HCH0 1330 aa21.03■□□□□ 0.96
COL23A1-202ENST00000407622 HDAC1Q13547 482 aaPredicted RBP21.03■□□□□ 0.96
COL23A1-202ENST00000407622 NME9Q86XW9 330 aa21.03■□□□□ 0.96
COL23A1-202ENST00000407622 ADAMTSL3P82987 1691 aa21.03■□□□□ 0.96
COL23A1-202ENST00000407622 IL27Q8NEV9 243 aa21.03■□□□□ 0.96
COL23A1-202ENST00000407622 PNNQ9H307 717 aaKnown RBP21.03■□□□□ 0.96
COL23A1-202ENST00000407622 METP08581 1390 aa21.02■□□□□ 0.96
COL23A1-202ENST00000407622 RIMS1Q86UR5 1692 aaKnown RBP21.02■□□□□ 0.96
COL23A1-202ENST00000407622 SLKQ9H2G2 1235 aaPredicted RBP21.01■□□□□ 0.95
COL23A1-202ENST00000407622 ZBTB40Q9NUA8 1239 aa21.01■□□□□ 0.95
COL23A1-202ENST00000407622 PPIP5K1Q6PFW1 1433 aa21.01■□□□□ 0.95
COL23A1-202ENST00000407622 LTKP29376 864 aa21.01■□□□□ 0.95
COL23A1-202ENST00000407622 CPSF1Q10570 1443 aaKnown RBP21.01■□□□□ 0.95
COL23A1-202ENST00000407622 KIF16BQ96L93 1317 aa21■□□□□ 0.95
COL23A1-202ENST00000407622 WASLO00401 505 aaPredicted RBP21■□□□□ 0.95
COL23A1-202ENST00000407622 TXNDC2Q86VQ3 553 aa21■□□□□ 0.95
COL23A1-202ENST00000407622 UPF2Q9HAU5 1272 aaKnown RBP20.99■□□□□ 0.95
COL23A1-202ENST00000407622 BECN1Q14457 450 aa20.99■□□□□ 0.95
COL23A1-202ENST00000407622 NFE2L2Q16236 605 aa20.99■□□□□ 0.95
COL23A1-202ENST00000407622 SMC5Q8IY18 1101 aa20.98■□□□□ 0.95
COL23A1-202ENST00000407622 THEMISQ8N1K5 641 aaPredicted RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms