RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 A0A1W2PP64 1363 aa32.76■■■□□ 2.83
COL13A1-203ENST00000398969 SEC24BO95487 1268 aa32.76■■■□□ 2.83
COL13A1-203ENST00000398969 TNRQ92752 1358 aa32.75■■■□□ 2.83
COL13A1-203ENST00000398969 SAFB2Q14151 953 aaKnown RBP eCLIP32.75■■■□□ 2.83
COL13A1-203ENST00000398969 GSE1Q14687 1217 aa32.75■■■□□ 2.83
COL13A1-203ENST00000398969 PTPRMP28827 1452 aa32.74■■■□□ 2.83
COL13A1-203ENST00000398969 NLRP1Q9C000 1473 aa32.72■■■□□ 2.83
COL13A1-203ENST00000398969 COL3A1P02461 1466 aaPredicted RBP32.69■■■□□ 2.82
COL13A1-203ENST00000398969 PDZRN3Q9UPQ7 1066 aa32.69■■■□□ 2.82
COL13A1-203ENST00000398969 MVPQ14764 893 aaKnown RBP32.68■■■□□ 2.82
COL13A1-203ENST00000398969 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.68■■■□□ 2.82
COL13A1-203ENST00000398969 CT47B1P0C2W7 299 aaPredicted RBP32.68■■■□□ 2.82
COL13A1-203ENST00000398969 SRPK2P78362 688 aaKnown RBP32.68■■■□□ 2.82
COL13A1-203ENST00000398969 PRAM1Q96QH2 718 aa32.68■■■□□ 2.82
COL13A1-203ENST00000398969 PLEKHF1Q96S99 279 aa32.68■■■□□ 2.82
COL13A1-203ENST00000398969 RWDD1Q9H446 243 aaPredicted RBP32.68■■■□□ 2.82
COL13A1-203ENST00000398969 ZKSCAN2Q63HK3 967 aa32.67■■■□□ 2.82
COL13A1-203ENST00000398969 GGNBP2Q9H3C7 697 aa32.66■■■□□ 2.82
COL13A1-203ENST00000398969 TSR2Q969E8 191 aaKnown RBP32.65■■■□□ 2.82
COL13A1-203ENST00000398969 POGKQ9P215 609 aa32.65■■■□□ 2.82
COL13A1-203ENST00000398969 SETD1AO15047 1707 aaKnown RBP32.65■■■□□ 2.82
COL13A1-203ENST00000398969 FRAT2O75474 233 aaPredicted RBP32.65■■■□□ 2.82
COL13A1-203ENST00000398969 IL27Q8NEV9 243 aa32.65■■■□□ 2.82
COL13A1-203ENST00000398969 ANKRD26Q9UPS8 1709 aa32.64■■■□□ 2.82
COL13A1-203ENST00000398969 ATAD2Q6PL18 1390 aa32.64■■■□□ 2.82
COL13A1-203ENST00000398969 U2SURPO15042 1029 aaKnown RBP32.63■■■□□ 2.81
COL13A1-203ENST00000398969 TMPOP42166 694 aaKnown RBP32.63■■■□□ 2.81
COL13A1-203ENST00000398969 DZIP1LQ8IYY4 767 aaKnown RBP32.62■■■□□ 2.81
COL13A1-203ENST00000398969 MED14O60244 1454 aa32.62■■■□□ 2.81
COL13A1-203ENST00000398969 HDGFP51858 240 aaKnown RBP32.62■■■□□ 2.81
COL13A1-203ENST00000398969 TRIM35Q9UPQ4 493 aa32.61■■■□□ 2.81
COL13A1-203ENST00000398969 NRXN3Q9Y4C0 1643 aa32.61■■■□□ 2.81
COL13A1-203ENST00000398969 CD163L1Q9NR16 1453 aa32.61■■■□□ 2.81
COL13A1-203ENST00000398969 FTSJ3Q8IY81 847 aaKnown RBP32.61■■■□□ 2.81
COL13A1-203ENST00000398969 UBR1Q8IWV7 1749 aa32.6■■■□□ 2.81
COL13A1-203ENST00000398969 EXOSC9Q06265 439 aaKnown RBP32.6■■■□□ 2.81
COL13A1-203ENST00000398969 TERF2IPQ9NYB0 399 aa32.6■■■□□ 2.81
COL13A1-203ENST00000398969 MINK1Q8N4C8 1332 aaPredicted RBP32.6■■■□□ 2.81
COL13A1-203ENST00000398969 FYB1O15117 783 aa32.6■■■□□ 2.81
COL13A1-203ENST00000398969 BECN1Q14457 450 aa32.6■■■□□ 2.81
COL13A1-203ENST00000398969 CEBPAP49715 358 aaPredicted RBP32.59■■■□□ 2.81
COL13A1-203ENST00000398969 DLC1Q96QB1 1528 aa32.58■■■□□ 2.81
COL13A1-203ENST00000398969 TMEM2Q9UHN6 1383 aa32.58■■■□□ 2.81
COL13A1-203ENST00000398969 SMC4Q9NTJ3 1288 aa32.58■■■□□ 2.81
COL13A1-203ENST00000398969 UPF2Q9HAU5 1272 aaKnown RBP32.56■■■□□ 2.8
COL13A1-203ENST00000398969 IL16Q14005 1332 aa32.55■■■□□ 2.8
COL13A1-203ENST00000398969 TBC1D32Q96NH3 1257 aa32.54■■■□□ 2.8
COL13A1-203ENST00000398969 TRIM27P14373 513 aa32.54■■■□□ 2.8
COL13A1-203ENST00000398969 SSH1Q8WYL5 1049 aa32.53■■■□□ 2.8
COL13A1-203ENST00000398969 C3P01024 1663 aa32.53■■■□□ 2.8
COL13A1-203ENST00000398969 METP08581 1390 aa32.52■■■□□ 2.8
COL13A1-203ENST00000398969 FER1L4A9Z1Z3 1794 aa32.51■■■□□ 2.8
COL13A1-203ENST00000398969 PNPLA6Q8IY17 1366 aa32.5■■■□□ 2.79
COL13A1-203ENST00000398969 WAPLQ7Z5K2 1190 aa32.49■■■□□ 2.79
COL13A1-203ENST00000398969 DIAPH1O60610 1272 aaKnown RBP32.49■■■□□ 2.79
COL13A1-203ENST00000398969 ATF7IPQ6VMQ6 1270 aa32.49■■■□□ 2.79
COL13A1-203ENST00000398969 DDX19BQ9UMR2 479 aa32.49■■■□□ 2.79
COL13A1-203ENST00000398969 RIPK4P57078 832 aa32.48■■■□□ 2.79
COL13A1-203ENST00000398969 HDAC1Q13547 482 aaPredicted RBP32.48■■■□□ 2.79
COL13A1-203ENST00000398969 HDGFL2Q7Z4V5 671 aaPredicted RBP32.48■■■□□ 2.79
COL13A1-203ENST00000398969 CDK19Q9BWU1 502 aa32.48■■■□□ 2.79
COL13A1-203ENST00000398969 ITPRIPQ8IWB1 547 aa32.46■■■□□ 2.79
COL13A1-203ENST00000398969 KIF20BQ96Q89 1820 aa32.46■■■□□ 2.79
COL13A1-203ENST00000398969 NOB1Q9ULX3 412 aaKnown RBP32.46■■■□□ 2.79
COL13A1-203ENST00000398969 PNNQ9H307 717 aaKnown RBP32.44■■■□□ 2.78
COL13A1-203ENST00000398969 BRPF3Q9ULD4 1205 aa32.44■■■□□ 2.78
COL13A1-203ENST00000398969 SLKQ9H2G2 1235 aaPredicted RBP32.43■■■□□ 2.78
COL13A1-203ENST00000398969 ANTXR1Q9H6X2 564 aa32.43■■■□□ 2.78
COL13A1-203ENST00000398969 CDC42BPGQ6DT37 1551 aa32.43■■■□□ 2.78
COL13A1-203ENST00000398969 LTKP29376 864 aa32.42■■■□□ 2.78
COL13A1-203ENST00000398969 PLPPR3Q6T4P5 718 aa32.42■■■□□ 2.78
COL13A1-203ENST00000398969 CABP1Q9NZU7 370 aa32.42■■■□□ 2.78
COL13A1-203ENST00000398969 TBC1D2Q9BYX2 928 aa32.41■■■□□ 2.78
COL13A1-203ENST00000398969 TMEM57Q8N5G2 664 aa32.4■■■□□ 2.78
COL13A1-203ENST00000398969 RTN4Q9NQC3 1192 aaKnown RBP32.4■■■□□ 2.78
COL13A1-203ENST00000398969 LRRC7Q96NW7 1537 aa32.4■■■□□ 2.78
COL13A1-203ENST00000398969 KIF16BQ96L93 1317 aa32.4■■■□□ 2.78
COL13A1-203ENST00000398969 TXNDC2Q86VQ3 553 aa32.39■■■□□ 2.78
COL13A1-203ENST00000398969 TECPR2O15040 1411 aa32.39■■■□□ 2.78
COL13A1-203ENST00000398969 ADAMTS13Q76LX8 1427 aa32.39■■■□□ 2.78
COL13A1-203ENST00000398969 SIRT1Q96EB6 747 aa32.39■■■□□ 2.78
COL13A1-203ENST00000398969 PLEKHG1Q9ULL1 1385 aa32.39■■■□□ 2.78
COL13A1-203ENST00000398969 SMC5Q8IY18 1101 aa32.38■■■□□ 2.77
COL13A1-203ENST00000398969 KNDC1Q76NI1 1749 aa32.38■■■□□ 2.77
COL13A1-203ENST00000398969 FCHSD2O94868 740 aa32.38■■■□□ 2.77
COL13A1-203ENST00000398969 ZBTB40Q9NUA8 1239 aa32.37■■■□□ 2.77
COL13A1-203ENST00000398969 FAM135BQ49AJ0 1406 aa32.37■■■□□ 2.77
COL13A1-203ENST00000398969 IPO8O15397 1037 aaKnown RBP32.35■■■□□ 2.77
COL13A1-203ENST00000398969 ALDH1L2Q3SY69 923 aa32.35■■■□□ 2.77
COL13A1-203ENST00000398969 SLIT1O75093 1534 aa32.34■■■□□ 2.77
COL13A1-203ENST00000398969 RSPH6AQ9H0K4 717 aa32.33■■■□□ 2.77
COL13A1-203ENST00000398969 EID1Q9Y6B2 187 aa32.33■■■□□ 2.77
COL13A1-203ENST00000398969 CPS1P31327 1500 aa32.33■■■□□ 2.77
COL13A1-203ENST00000398969 ARHGAP23Q9P227 1491 aa32.32■■■□□ 2.76
COL13A1-203ENST00000398969 DNAJC5Q9H3Z4 198 aa32.32■■■□□ 2.76
COL13A1-203ENST00000398969 PRKAR2BP31323 418 aa32.31■■■□□ 2.76
COL13A1-203ENST00000398969 ATP7BP35670 1465 aa32.31■■■□□ 2.76
COL13A1-203ENST00000398969 WASLO00401 505 aaPredicted RBP32.31■■■□□ 2.76
COL13A1-203ENST00000398969 C22orf23Q9BZE7 217 aa32.31■■■□□ 2.76
COL13A1-203ENST00000398969 POLKQ9UBT6 870 aa32.31■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms