RNA–Protein interactions for RNA: ENST00000394829.6

PPP3CB-204, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-204ENST00000394829 A0A1W2PP64 1363 aa15.97■□□□□ 0.15
PPP3CB-204ENST00000394829 FBXO31Q5XUX0 539 aaPredicted RBP15.97■□□□□ 0.15
PPP3CB-204ENST00000394829 AAMPQ13685 434 aa15.97■□□□□ 0.15
PPP3CB-204ENST00000394829 PKNOX2Q96KN3 472 aa15.97■□□□□ 0.15
PPP3CB-204ENST00000394829 SPATA31D1Q6ZQQ2 1576 aa15.96■□□□□ 0.15
PPP3CB-204ENST00000394829 U2SURPO15042 1029 aaKnown RBP15.96■□□□□ 0.15
PPP3CB-204ENST00000394829 SRPK2P78362 688 aaKnown RBP15.96■□□□□ 0.14
PPP3CB-204ENST00000394829 MVPQ14764 893 aaKnown RBP15.95■□□□□ 0.14
PPP3CB-204ENST00000394829 MLECQ14165 292 aa15.95■□□□□ 0.14
PPP3CB-204ENST00000394829 PLEKHF1Q96S99 279 aa15.95■□□□□ 0.14
PPP3CB-204ENST00000394829 ZKSCAN2Q63HK3 967 aa15.94■□□□□ 0.14
PPP3CB-204ENST00000394829 RWDD1Q9H446 243 aaPredicted RBP15.94■□□□□ 0.14
PPP3CB-204ENST00000394829 ABCC11Q96J66 1382 aa15.94■□□□□ 0.14
PPP3CB-204ENST00000394829 EXOSC9Q06265 439 aaKnown RBP15.94■□□□□ 0.14
PPP3CB-204ENST00000394829 NCBP3Q53F19 620 aaKnown RBP15.94■□□□□ 0.14
PPP3CB-204ENST00000394829 FTSJ3Q8IY81 847 aaKnown RBP15.93■□□□□ 0.14
PPP3CB-204ENST00000394829 TMPOP42166 694 aaKnown RBP15.93■□□□□ 0.14
PPP3CB-204ENST00000394829 DZIP1LQ8IYY4 767 aaKnown RBP15.93■□□□□ 0.14
PPP3CB-204ENST00000394829 SLC52A1Q9NWF4 448 aa15.93■□□□□ 0.14
PPP3CB-204ENST00000394829 TRIM35Q9UPQ4 493 aa15.93■□□□□ 0.14
PPP3CB-204ENST00000394829 TRHP20396 242 aaPredicted RBP15.92■□□□□ 0.14
PPP3CB-204ENST00000394829 SLKQ9H2G2 1235 aaPredicted RBP15.92■□□□□ 0.14
PPP3CB-204ENST00000394829 SMC4Q9NTJ3 1288 aa15.92■□□□□ 0.14
PPP3CB-204ENST00000394829 MINK1Q8N4C8 1332 aaPredicted RBP15.92■□□□□ 0.14
PPP3CB-204ENST00000394829 COL3A1P02461 1466 aaPredicted RBP15.91■□□□□ 0.14
PPP3CB-204ENST00000394829 FYB1O15117 783 aa15.91■□□□□ 0.14
PPP3CB-204ENST00000394829 BECN1Q14457 450 aa15.91■□□□□ 0.14
PPP3CB-204ENST00000394829 TRIM27P14373 513 aa15.9■□□□□ 0.14
PPP3CB-204ENST00000394829 SSH1Q8WYL5 1049 aa15.9■□□□□ 0.14
PPP3CB-204ENST00000394829 TBC1D32Q96NH3 1257 aa15.9■□□□□ 0.14
PPP3CB-204ENST00000394829 DNAJC5Q9H3Z4 198 aa15.9■□□□□ 0.14
PPP3CB-204ENST00000394829 PRAM1Q96QH2 718 aa15.9■□□□□ 0.14
PPP3CB-204ENST00000394829 PTPRMP28827 1452 aa15.89■□□□□ 0.13
PPP3CB-204ENST00000394829 CD163L1Q9NR16 1453 aa15.89■□□□□ 0.13
PPP3CB-204ENST00000394829 UPF2Q9HAU5 1272 aaKnown RBP15.89■□□□□ 0.13
PPP3CB-204ENST00000394829 CT47B1P0C2W7 299 aaPredicted RBP15.88■□□□□ 0.13
PPP3CB-204ENST00000394829 ZMYM3Q14202 1370 aa15.88■□□□□ 0.13
PPP3CB-204ENST00000394829 ANKRD26Q9UPS8 1709 aa15.88■□□□□ 0.13
PPP3CB-204ENST00000394829 ZFYVE9O95405 1425 aa15.88■□□□□ 0.13
PPP3CB-204ENST00000394829 ITPRIPQ8IWB1 547 aa15.88■□□□□ 0.13
PPP3CB-204ENST00000394829 RIPK4P57078 832 aa15.87■□□□□ 0.13
PPP3CB-204ENST00000394829 TERF2IPQ9NYB0 399 aa15.87■□□□□ 0.13
PPP3CB-204ENST00000394829 POGKQ9P215 609 aa15.87■□□□□ 0.13
PPP3CB-204ENST00000394829 NOB1Q9ULX3 412 aaKnown RBP15.87■□□□□ 0.13
PPP3CB-204ENST00000394829 PLEKHG5O94827 1062 aa15.86■□□□□ 0.13
PPP3CB-204ENST00000394829 ATF7IPQ6VMQ6 1270 aa15.86■□□□□ 0.13
PPP3CB-204ENST00000394829 TBC1D2Q9BYX2 928 aa15.86■□□□□ 0.13
PPP3CB-204ENST00000394829 ATAD2Q6PL18 1390 aa15.86■□□□□ 0.13
PPP3CB-204ENST00000394829 ANTXR1Q9H6X2 564 aa15.85■□□□□ 0.13
PPP3CB-204ENST00000394829 YTHDC2Q9H6S0 1430 aaKnown RBP15.85■□□□□ 0.13
PPP3CB-204ENST00000394829 A2ML1A8K2U0 1454 aa15.85■□□□□ 0.13
PPP3CB-204ENST00000394829 DIAPH1O60610 1272 aaKnown RBP15.85■□□□□ 0.13
PPP3CB-204ENST00000394829 FBLN1P23142 703 aa15.84■□□□□ 0.13
PPP3CB-204ENST00000394829 TMEM57Q8N5G2 664 aa15.84■□□□□ 0.13
PPP3CB-204ENST00000394829 DDX19BQ9UMR2 479 aa15.84■□□□□ 0.13
PPP3CB-204ENST00000394829 HDAC1Q13547 482 aaPredicted RBP15.83■□□□□ 0.13
PPP3CB-204ENST00000394829 CABP1Q9NZU7 370 aa15.83■□□□□ 0.13
PPP3CB-204ENST00000394829 CDK19Q9BWU1 502 aa15.83■□□□□ 0.12
PPP3CB-204ENST00000394829 MED14O60244 1454 aa15.83■□□□□ 0.12
PPP3CB-204ENST00000394829 IL16Q14005 1332 aa15.83■□□□□ 0.12
PPP3CB-204ENST00000394829 FER1L4A9Z1Z3 1794 aa15.83■□□□□ 0.12
PPP3CB-204ENST00000394829 SPRYD3Q8NCJ5 442 aa15.82■□□□□ 0.12
PPP3CB-204ENST00000394829 C3P01024 1663 aa15.81■□□□□ 0.12
PPP3CB-204ENST00000394829 MFAP1P55081 439 aaKnown RBP15.81■□□□□ 0.12
PPP3CB-204ENST00000394829 HDGFL2Q7Z4V5 671 aaPredicted RBP15.81■□□□□ 0.12
PPP3CB-204ENST00000394829 KIF20BQ96Q89 1820 aa15.81■□□□□ 0.12
PPP3CB-204ENST00000394829 PNPLA6Q8IY17 1366 aa15.81■□□□□ 0.12
PPP3CB-204ENST00000394829 ZBTB40Q9NUA8 1239 aa15.81■□□□□ 0.12
PPP3CB-204ENST00000394829 SETD1AO15047 1707 aaKnown RBP15.8■□□□□ 0.12
PPP3CB-204ENST00000394829 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.8■□□□□ 0.12
PPP3CB-204ENST00000394829 ESF1Q9H501 851 aaKnown RBP15.8■□□□□ 0.12
PPP3CB-204ENST00000394829 ALKQ9UM73 1620 aa15.8■□□□□ 0.12
PPP3CB-204ENST00000394829 UBR1Q8IWV7 1749 aa15.8■□□□□ 0.12
PPP3CB-204ENST00000394829 SMC5Q8IY18 1101 aa15.8■□□□□ 0.12
PPP3CB-204ENST00000394829 C22orf23Q9BZE7 217 aa15.8■□□□□ 0.12
PPP3CB-204ENST00000394829 LRRC7Q96NW7 1537 aa15.79■□□□□ 0.12
PPP3CB-204ENST00000394829 PRKAR2BP31323 418 aa15.78■□□□□ 0.12
PPP3CB-204ENST00000394829 KIF16BQ96L93 1317 aa15.77■□□□□ 0.12
PPP3CB-204ENST00000394829 MAP2P11137 1827 aaKnown RBP15.77■□□□□ 0.12
PPP3CB-204ENST00000394829 FCHSD2O94868 740 aa15.77■□□□□ 0.12
PPP3CB-204ENST00000394829 RSPH6AQ9H0K4 717 aa15.77■□□□□ 0.12
PPP3CB-204ENST00000394829 TNRQ92752 1358 aa15.77■□□□□ 0.12
PPP3CB-204ENST00000394829 NRXN3Q9Y4C0 1643 aa15.77■□□□□ 0.12
PPP3CB-204ENST00000394829 WAPLQ7Z5K2 1190 aa15.77■□□□□ 0.11
PPP3CB-204ENST00000394829 PNNQ9H307 717 aaKnown RBP15.77■□□□□ 0.11
PPP3CB-204ENST00000394829 POLKQ9UBT6 870 aa15.77■□□□□ 0.11
PPP3CB-204ENST00000394829 RIMS2Q9UQ26 1411 aa15.77■□□□□ 0.11
PPP3CB-204ENST00000394829 IPO8O15397 1037 aaKnown RBP15.77■□□□□ 0.11
PPP3CB-204ENST00000394829 HMOX1P09601 288 aa15.76■□□□□ 0.11
PPP3CB-204ENST00000394829 PHACTR3Q96KR7 559 aa15.76■□□□□ 0.11
PPP3CB-204ENST00000394829 THUMPD2Q9BTF0 503 aaKnown RBP15.76■□□□□ 0.11
PPP3CB-204ENST00000394829 STAG3Q9UJ98 1225 aa15.76■□□□□ 0.11
PPP3CB-204ENST00000394829 ALDH1L2Q3SY69 923 aa15.75■□□□□ 0.11
PPP3CB-204ENST00000394829 FAM135BQ49AJ0 1406 aa15.75■□□□□ 0.11
PPP3CB-204ENST00000394829 LNPKQ9C0E8 428 aa15.75■□□□□ 0.11
PPP3CB-204ENST00000394829 CDC42BPGQ6DT37 1551 aa15.74■□□□□ 0.11
PPP3CB-204ENST00000394829 NUCB1Q02818 461 aa15.74■□□□□ 0.11
PPP3CB-204ENST00000394829 CEBPAP49715 358 aaPredicted RBP15.73■□□□□ 0.11
PPP3CB-204ENST00000394829 TSPYL6Q8N831 410 aa15.72■□□□□ 0.11
PPP3CB-204ENST00000394829 EMILIN1Q9Y6C2 1016 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms