RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 SPHKAPQ2M3C7 1700 aa18.18■□□□□ 0.5
SFXN3-202ENST00000393459 DTNBO60941 627 aa18.17■□□□□ 0.5
SFXN3-202ENST00000393459 TSC1Q92574 1164 aa18.17■□□□□ 0.5
SFXN3-202ENST00000393459 CYB5RLQ6IPT4 315 aa18.17■□□□□ 0.5
SFXN3-202ENST00000393459 GAS2L2Q8NHY3 880 aa18.17■□□□□ 0.5
SFXN3-202ENST00000393459 GBP4Q96PP9 640 aa18.17■□□□□ 0.5
SFXN3-202ENST00000393459 MROH1Q8NDA8 1641 aa18.16■□□□□ 0.5
SFXN3-202ENST00000393459 HECW2Q9P2P5 1572 aa18.16■□□□□ 0.5
SFXN3-202ENST00000393459 ADGRF5Q8IZF2 1346 aa18.15■□□□□ 0.5
SFXN3-202ENST00000393459 PLEKHG5O94827 1062 aa18.15■□□□□ 0.5
SFXN3-202ENST00000393459 GGNBP2Q9H3C7 697 aa18.14■□□□□ 0.5
SFXN3-202ENST00000393459 STK26Q9P289 416 aa18.14■□□□□ 0.49
SFXN3-202ENST00000393459 ZHX1Q9UKY1 873 aaPredicted RBP18.14■□□□□ 0.49
SFXN3-202ENST00000393459 INSRP06213 1382 aa18.14■□□□□ 0.49
SFXN3-202ENST00000393459 ZNF692Q9BU19 519 aaPredicted RBP18.13■□□□□ 0.49
SFXN3-202ENST00000393459 LMTK2Q8IWU2 1503 aa18.13■□□□□ 0.49
SFXN3-202ENST00000393459 CEP152O94986 1710 aa18.13■□□□□ 0.49
SFXN3-202ENST00000393459 RIMBP3CA6NJZ7 1639 aa18.12■□□□□ 0.49
SFXN3-202ENST00000393459 RIMBP3BA6NNM3 1639 aa18.12■□□□□ 0.49
SFXN3-202ENST00000393459 RIMBP3Q9UFD9 1639 aa18.12■□□□□ 0.49
SFXN3-202ENST00000393459 CLTCL1P53675 1640 aa18.11■□□□□ 0.49
SFXN3-202ENST00000393459 EFCAB6Q5THR3 1501 aa18.11■□□□□ 0.49
SFXN3-202ENST00000393459 ATAD2Q6PL18 1390 aa18.11■□□□□ 0.49
SFXN3-202ENST00000393459 GLI2P10070 1586 aa18.11■□□□□ 0.49
SFXN3-202ENST00000393459 PLCB2Q00722 1185 aa18.11■□□□□ 0.49
SFXN3-202ENST00000393459 NEURL4Q96JN8 1562 aa18.11■□□□□ 0.49
SFXN3-202ENST00000393459 MAP3K4Q9Y6R4 1608 aa18.11■□□□□ 0.49
SFXN3-202ENST00000393459 PRPF40AO75400 957 aaKnown RBP18.11■□□□□ 0.49
SFXN3-202ENST00000393459 DNTTIP2Q5QJE6 756 aaKnown RBP18.11■□□□□ 0.49
SFXN3-202ENST00000393459 AK9Q5TCS8 1911 aa18.11■□□□□ 0.49
SFXN3-202ENST00000393459 CABP2Q9NPB3 220 aa18.1■□□□□ 0.49
SFXN3-202ENST00000393459 ASXL1Q8IXJ9 1541 aa18.09■□□□□ 0.49
SFXN3-202ENST00000393459 GOLGA6L22H0YM25 854 aa18.09■□□□□ 0.49
SFXN3-202ENST00000393459 NSD3Q9BZ95 1437 aa18.09■□□□□ 0.49
SFXN3-202ENST00000393459 FRMPD1Q5SYB0 1578 aa18.09■□□□□ 0.49
SFXN3-202ENST00000393459 ATF7IPQ6VMQ6 1270 aa18.08■□□□□ 0.48
SFXN3-202ENST00000393459 CFAP53Q96M91 514 aa18.08■□□□□ 0.48
SFXN3-202ENST00000393459 RAPGEF3O95398 923 aa18.07■□□□□ 0.48
SFXN3-202ENST00000393459 C16orf71Q8IYS4 520 aaPredicted RBP18.07■□□□□ 0.48
SFXN3-202ENST00000393459 PTMAP06454 111 aaKnown RBP18.07■□□□□ 0.48
SFXN3-202ENST00000393459 RIPK4P57078 832 aa18.07■□□□□ 0.48
SFXN3-202ENST00000393459 ZNF830Q96NB3 372 aaPredicted RBP18.07■□□□□ 0.48
SFXN3-202ENST00000393459 IQGAP1P46940 1657 aa18.07■□□□□ 0.48
SFXN3-202ENST00000393459 UQCRHLA0A096LP55 91 aa18.07■□□□□ 0.48
SFXN3-202ENST00000393459 UQCRHP07919 91 aa18.07■□□□□ 0.48
SFXN3-202ENST00000393459 CALD1Q05682 793 aaKnown RBP18.07■□□□□ 0.48
SFXN3-202ENST00000393459 TBC1D9Q6ZT07 1266 aa18.07■□□□□ 0.48
SFXN3-202ENST00000393459 ZGPATQ8N5A5 531 aaKnown RBP18.07■□□□□ 0.48
SFXN3-202ENST00000393459 ABCA6Q8N139 1617 aa18.07■□□□□ 0.48
SFXN3-202ENST00000393459 PRIM1P49642 420 aaKnown RBP18.06■□□□□ 0.48
SFXN3-202ENST00000393459 CHD1LQ86WJ1 897 aa18.06■□□□□ 0.48
SFXN3-202ENST00000393459 PPRC1Q5VV67 1664 aaKnown RBP18.06■□□□□ 0.48
SFXN3-202ENST00000393459 MADDQ8WXG6 1647 aa18.06■□□□□ 0.48
SFXN3-202ENST00000393459 HMOX1P09601 288 aa18.05■□□□□ 0.48
SFXN3-202ENST00000393459 ZSCAN30Q86W11 494 aa18.05■□□□□ 0.48
SFXN3-202ENST00000393459 RBSNQ9H1K0 784 aa18.05■□□□□ 0.48
SFXN3-202ENST00000393459 BAG4O95429 457 aaKnown RBP18.05■□□□□ 0.48
SFXN3-202ENST00000393459 DDX19BQ9UMR2 479 aa18.05■□□□□ 0.48
SFXN3-202ENST00000393459 SYCE3A1L190 88 aa18.04■□□□□ 0.48
SFXN3-202ENST00000393459 RAB3GAP1Q15042 981 aa18.04■□□□□ 0.48
SFXN3-202ENST00000393459 GGT6Q6P531 493 aa18.04■□□□□ 0.48
SFXN3-202ENST00000393459 K7ELQ4 463 aaPredicted RBP18.04■□□□□ 0.48
SFXN3-202ENST00000393459 C17orf53Q8N3J3 647 aaPredicted RBP18.04■□□□□ 0.48
SFXN3-202ENST00000393459 GDPD2Q9HCC8 539 aa18.04■□□□□ 0.48
SFXN3-202ENST00000393459 IGSF3O75054 1194 aa18.03■□□□□ 0.48
SFXN3-202ENST00000393459 NSFL1CQ9UNZ2 370 aaKnown RBP18.03■□□□□ 0.48
SFXN3-202ENST00000393459 RICTORQ6R327 1708 aa18.02■□□□□ 0.48
SFXN3-202ENST00000393459 PIK3C2GO75747 1445 aa18.02■□□□□ 0.48
SFXN3-202ENST00000393459 OTUD7AQ8TE49 926 aaPredicted RBP18.02■□□□□ 0.48
SFXN3-202ENST00000393459 KIF2CQ99661 725 aa18.02■□□□□ 0.48
SFXN3-202ENST00000393459 PDCL3Q9H2J4 239 aa18.02■□□□□ 0.48
SFXN3-202ENST00000393459 PODXL2Q9NZ53 605 aa18.02■□□□□ 0.48
SFXN3-202ENST00000393459 SMARCA5O60264 1052 aaPredicted RBP18.02■□□□□ 0.47
SFXN3-202ENST00000393459 DIP2CQ9Y2E4 1556 aa18.01■□□□□ 0.47
SFXN3-202ENST00000393459 FAM69CQ0P6D2 419 aa18.01■□□□□ 0.47
SFXN3-202ENST00000393459 TSHZ3Q63HK5 1081 aa18.01■□□□□ 0.47
SFXN3-202ENST00000393459 KIF1BO60333 1816 aa18.01■□□□□ 0.47
SFXN3-202ENST00000393459 SRPK2P78362 688 aaKnown RBP18■□□□□ 0.47
SFXN3-202ENST00000393459 CCDC173Q0VFZ6 552 aa18■□□□□ 0.47
SFXN3-202ENST00000393459 ZSCAN23Q3MJ62 389 aa18■□□□□ 0.47
SFXN3-202ENST00000393459 NPATQ14207 1427 aa18■□□□□ 0.47
SFXN3-202ENST00000393459 MYOM2P54296 1465 aa18■□□□□ 0.47
SFXN3-202ENST00000393459 KIAA1210Q9ULL0 1709 aa18■□□□□ 0.47
SFXN3-202ENST00000393459 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18■□□□□ 0.47
SFXN3-202ENST00000393459 DIP2BQ9P265 1576 aa17.99■□□□□ 0.47
SFXN3-202ENST00000393459 TPM2P07951 284 aa17.99■□□□□ 0.47
SFXN3-202ENST00000393459 TSPYL6Q8N831 410 aa17.99■□□□□ 0.47
SFXN3-202ENST00000393459 ABCC3O15438 1527 aa17.99■□□□□ 0.47
SFXN3-202ENST00000393459 TMPOP42166 694 aaKnown RBP17.99■□□□□ 0.47
SFXN3-202ENST00000393459 UGGT1Q9NYU2 1555 aa17.98■□□□□ 0.47
SFXN3-202ENST00000393459 WDR63Q8IWG1 891 aa17.98■□□□□ 0.47
SFXN3-202ENST00000393459 SMC5Q8IY18 1101 aa17.97■□□□□ 0.47
SFXN3-202ENST00000393459 LARP6Q9BRS8 491 aaKnown RBP17.97■□□□□ 0.47
SFXN3-202ENST00000393459 ZBTB40Q9NUA8 1239 aa17.97■□□□□ 0.47
SFXN3-202ENST00000393459 SCAF11Q99590 1463 aaKnown RBP17.97■□□□□ 0.47
SFXN3-202ENST00000393459 NUCB1Q02818 461 aa17.97■□□□□ 0.47
SFXN3-202ENST00000393459 DCTN1Q14203 1278 aa17.96■□□□□ 0.47
SFXN3-202ENST00000393459 OFD1O75665 1012 aa17.95■□□□□ 0.46
SFXN3-202ENST00000393459 TRIM35Q9UPQ4 493 aa17.95■□□□□ 0.46
SFXN3-202ENST00000393459 SYNMO15061 1565 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms