RNA–Protein interactions for RNA: ENST00000381077.9

PUDP-201, Transcript of pseudouridine 5'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUDP, Length 2,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-201ENST00000381077 NRXN3Q9Y4C0 1643 aa16.31■□□□□ 0.2
PUDP-201ENST00000381077 PAK3O75914 559 aaPredicted RBP16.3■□□□□ 0.2
PUDP-201ENST00000381077 VIRMAQ69YN4 1812 aaKnown RBP16.3■□□□□ 0.2
PUDP-201ENST00000381077 SAFB2Q14151 953 aaKnown RBP eCLIP16.28■□□□□ 0.2
PUDP-201ENST00000381077 CPS1P31327 1500 aa16.28■□□□□ 0.2
PUDP-201ENST00000381077 CPSF1Q10570 1443 aaKnown RBP16.28■□□□□ 0.2
PUDP-201ENST00000381077 EDC4Q6P2E9 1401 aaKnown RBP16.28■□□□□ 0.2
PUDP-201ENST00000381077 GGNBP2Q9H3C7 697 aa16.28■□□□□ 0.2
PUDP-201ENST00000381077 KIF13AQ9H1H9 1805 aa16.28■□□□□ 0.2
PUDP-201ENST00000381077 DIAPH1O60610 1272 aaKnown RBP16.27■□□□□ 0.2
PUDP-201ENST00000381077 TMPOP42166 694 aaKnown RBP16.27■□□□□ 0.2
PUDP-201ENST00000381077 AATKQ6ZMQ8 1374 aa16.27■□□□□ 0.19
PUDP-201ENST00000381077 FCHSD2O94868 740 aa16.27■□□□□ 0.19
PUDP-201ENST00000381077 ZNF428Q96B54 188 aa16.27■□□□□ 0.19
PUDP-201ENST00000381077 USP35Q9P2H5 1018 aa16.27■□□□□ 0.19
PUDP-201ENST00000381077 RRP7AQ9Y3A4 280 aaKnown RBP16.27■□□□□ 0.19
PUDP-201ENST00000381077 NEUROD2Q15784 382 aa16.26■□□□□ 0.19
PUDP-201ENST00000381077 C8orf34Q49A92 452 aa16.26■□□□□ 0.19
PUDP-201ENST00000381077 CABP1Q9NZU7 370 aa16.25■□□□□ 0.19
PUDP-201ENST00000381077 PPIP5K1Q6PFW1 1433 aa16.24■□□□□ 0.19
PUDP-201ENST00000381077 MON2Q7Z3U7 1717 aa16.24■□□□□ 0.19
PUDP-201ENST00000381077 CDK12Q9NYV4 1490 aaPredicted RBP16.24■□□□□ 0.19
PUDP-201ENST00000381077 PPM1GO15355 546 aaPredicted RBP16.24■□□□□ 0.19
PUDP-201ENST00000381077 ZKSCAN2Q63HK3 967 aa16.24■□□□□ 0.19
PUDP-201ENST00000381077 COG6Q9Y2V7 657 aa16.24■□□□□ 0.19
PUDP-201ENST00000381077 WASLO00401 505 aaPredicted RBP16.23■□□□□ 0.19
PUDP-201ENST00000381077 ESF1Q9H501 851 aaKnown RBP16.23■□□□□ 0.19
PUDP-201ENST00000381077 TRIM35Q9UPQ4 493 aa16.22■□□□□ 0.19
PUDP-201ENST00000381077 U2SURPO15042 1029 aaKnown RBP16.22■□□□□ 0.19
PUDP-201ENST00000381077 NEFMP07197 916 aa16.22■□□□□ 0.19
PUDP-201ENST00000381077 CALD1Q05682 793 aaKnown RBP16.22■□□□□ 0.19
PUDP-201ENST00000381077 NPM2Q86SE8 214 aaKnown RBP16.22■□□□□ 0.19
PUDP-201ENST00000381077 PANK1Q8TE04 598 aa16.22■□□□□ 0.19
PUDP-201ENST00000381077 AKAP12Q02952 1782 aa16.21■□□□□ 0.19
PUDP-201ENST00000381077 TNRQ92752 1358 aa16.21■□□□□ 0.19
PUDP-201ENST00000381077 IGHDP01880 384 aa16.21■□□□□ 0.19
PUDP-201ENST00000381077 MVPQ14764 893 aaKnown RBP16.21■□□□□ 0.19
PUDP-201ENST00000381077 RWDD1Q9H446 243 aaPredicted RBP16.21■□□□□ 0.19
PUDP-201ENST00000381077 BRPF1P55201 1214 aaPredicted RBP16.21■□□□□ 0.18
PUDP-201ENST00000381077 FRAT1Q92837 279 aaPredicted RBP16.21■□□□□ 0.18
PUDP-201ENST00000381077 UBR1Q8IWV7 1749 aa16.2■□□□□ 0.18
PUDP-201ENST00000381077 LRRC7Q96NW7 1537 aa16.2■□□□□ 0.18
PUDP-201ENST00000381077 ALDH1L2Q3SY69 923 aa16.2■□□□□ 0.18
PUDP-201ENST00000381077 RTL5Q5HYW3 569 aaPredicted RBP16.2■□□□□ 0.18
PUDP-201ENST00000381077 KIF16BQ96L93 1317 aa16.19■□□□□ 0.18
PUDP-201ENST00000381077 ZNF692Q9BU19 519 aaPredicted RBP16.19■□□□□ 0.18
PUDP-201ENST00000381077 MAP2P11137 1827 aaKnown RBP16.19■□□□□ 0.18
PUDP-201ENST00000381077 DZIP1LQ8IYY4 767 aaKnown RBP16.19■□□□□ 0.18
PUDP-201ENST00000381077 ITSN1Q15811 1721 aa16.19■□□□□ 0.18
PUDP-201ENST00000381077 TMEM2Q9UHN6 1383 aa16.18■□□□□ 0.18
PUDP-201ENST00000381077 POLKQ9UBT6 870 aa16.18■□□□□ 0.18
PUDP-201ENST00000381077 CCDC61Q9Y6R9 512 aa16.18■□□□□ 0.18
PUDP-201ENST00000381077 C3P01024 1663 aa16.18■□□□□ 0.18
PUDP-201ENST00000381077 METP08581 1390 aa16.18■□□□□ 0.18
PUDP-201ENST00000381077 IPO8O15397 1037 aaKnown RBP16.18■□□□□ 0.18
PUDP-201ENST00000381077 RIPK4P57078 832 aa16.18■□□□□ 0.18
PUDP-201ENST00000381077 RSPH6AQ9H0K4 717 aa16.18■□□□□ 0.18
PUDP-201ENST00000381077 DDX19BQ9UMR2 479 aa16.18■□□□□ 0.18
PUDP-201ENST00000381077 WAPLQ7Z5K2 1190 aa16.17■□□□□ 0.18
PUDP-201ENST00000381077 RLBP1P12271 317 aa16.16■□□□□ 0.18
PUDP-201ENST00000381077 RGS3P49796 1198 aa16.16■□□□□ 0.18
PUDP-201ENST00000381077 FTSJ3Q8IY81 847 aaKnown RBP16.16■□□□□ 0.18
PUDP-201ENST00000381077 CHMP4BQ9H444 224 aaKnown RBP16.16■□□□□ 0.18
PUDP-201ENST00000381077 EXOSC9Q06265 439 aaKnown RBP16.15■□□□□ 0.18
PUDP-201ENST00000381077 LMOD3Q0VAK6 560 aa16.15■□□□□ 0.18
PUDP-201ENST00000381077 HDAC1Q13547 482 aaPredicted RBP16.15■□□□□ 0.18
PUDP-201ENST00000381077 ATF7IPQ6VMQ6 1270 aa16.15■□□□□ 0.18
PUDP-201ENST00000381077 SKAP1Q86WV1 359 aa16.15■□□□□ 0.18
PUDP-201ENST00000381077 SMC4Q9NTJ3 1288 aa16.15■□□□□ 0.18
PUDP-201ENST00000381077 PLEKHG1Q9ULL1 1385 aa16.15■□□□□ 0.18
PUDP-201ENST00000381077 NFE2L2Q16236 605 aa16.14■□□□□ 0.17
PUDP-201ENST00000381077 NUDT16Q96DE0 195 aaKnown RBP16.14■□□□□ 0.17
PUDP-201ENST00000381077 PCDHB15Q9Y5E8 787 aa16.14■□□□□ 0.17
PUDP-201ENST00000381077 TOPAZ1Q8N9V7 1692 aa16.14■□□□□ 0.17
PUDP-201ENST00000381077 NRKQ7Z2Y5 1582 aa16.14■□□□□ 0.17
PUDP-201ENST00000381077 DAXXQ9UER7 740 aaPredicted RBP16.13■□□□□ 0.17
PUDP-201ENST00000381077 ADAMTS13Q76LX8 1427 aa16.13■□□□□ 0.17
PUDP-201ENST00000381077 SSH1Q8WYL5 1049 aa16.12■□□□□ 0.17
PUDP-201ENST00000381077 COG3Q96JB2 828 aa16.12■□□□□ 0.17
PUDP-201ENST00000381077 TRIM27P14373 513 aa16.12■□□□□ 0.17
PUDP-201ENST00000381077 IL13P35225 146 aa16.12■□□□□ 0.17
PUDP-201ENST00000381077 MLECQ14165 292 aa16.12■□□□□ 0.17
PUDP-201ENST00000381077 ARHGAP45Q92619 1136 aa16.12■□□□□ 0.17
PUDP-201ENST00000381077 TSR2Q969E8 191 aaKnown RBP16.12■□□□□ 0.17
PUDP-201ENST00000381077 PRKAR2BP31323 418 aa16.11■□□□□ 0.17
PUDP-201ENST00000381077 IFT57Q9NWB7 429 aa16.11■□□□□ 0.17
PUDP-201ENST00000381077 NBR1Q14596 966 aa16.1■□□□□ 0.17
PUDP-201ENST00000381077 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.1■□□□□ 0.17
PUDP-201ENST00000381077 BCL2L13Q9BXK5 485 aa16.1■□□□□ 0.17
PUDP-201ENST00000381077 GNAI1P63096 354 aa16.1■□□□□ 0.17
PUDP-201ENST00000381077 SLIT1O75093 1534 aa16.1■□□□□ 0.17
PUDP-201ENST00000381077 DIP2AQ14689 1571 aa16.09■□□□□ 0.17
PUDP-201ENST00000381077 PIK3R4Q99570 1358 aa16.09■□□□□ 0.17
PUDP-201ENST00000381077 PLEKHG3A1L390 1219 aa16.09■□□□□ 0.17
PUDP-201ENST00000381077 TXNDC2Q86VQ3 553 aa16.09■□□□□ 0.17
PUDP-201ENST00000381077 PDZRN3Q9UPQ7 1066 aa16.09■□□□□ 0.17
PUDP-201ENST00000381077 NALCNQ8IZF0 1738 aa16.09■□□□□ 0.17
PUDP-201ENST00000381077 DEKP35659 375 aaKnown RBP16.08■□□□□ 0.16
PUDP-201ENST00000381077 UPF2Q9HAU5 1272 aaKnown RBP16.08■□□□□ 0.16
PUDP-201ENST00000381077 PTCH1Q13635 1447 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms