RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 POGKQ9P215 609 aa25.09■■□□□ 1.61
SHROOM1-202ENST00000378676 ARHGEF40Q8TER5 1519 aa25.09■■□□□ 1.61
SHROOM1-202ENST00000378676 TSR2Q969E8 191 aaKnown RBP25.08■■□□□ 1.61
SHROOM1-202ENST00000378676 USP35Q9P2H5 1018 aa25.08■■□□□ 1.61
SHROOM1-202ENST00000378676 MAPK8IP3Q9UPT6 1336 aa25.08■■□□□ 1.6
SHROOM1-202ENST00000378676 TERF2IPQ9NYB0 399 aa25.06■■□□□ 1.6
SHROOM1-202ENST00000378676 USP19O94966 1318 aa25.06■■□□□ 1.6
SHROOM1-202ENST00000378676 TMPOP42166 694 aaKnown RBP25.05■■□□□ 1.6
SHROOM1-202ENST00000378676 TRIM35Q9UPQ4 493 aa25.05■■□□□ 1.6
SHROOM1-202ENST00000378676 PMFBP1Q8TBY8 1022 aa25.04■■□□□ 1.6
SHROOM1-202ENST00000378676 REREQ9P2R6 1566 aa25.03■■□□□ 1.6
SHROOM1-202ENST00000378676 SEC24BO95487 1268 aa25.03■■□□□ 1.6
SHROOM1-202ENST00000378676 AAMPQ13685 434 aa25.03■■□□□ 1.6
SHROOM1-202ENST00000378676 CDK19Q9BWU1 502 aa25.03■■□□□ 1.6
SHROOM1-202ENST00000378676 DAXXQ9UER7 740 aaPredicted RBP25.02■■□□□ 1.6
SHROOM1-202ENST00000378676 LRRC7Q96NW7 1537 aa25.01■■□□□ 1.59
SHROOM1-202ENST00000378676 EXOSC9Q06265 439 aaKnown RBP25.01■■□□□ 1.59
SHROOM1-202ENST00000378676 MVPQ14764 893 aaKnown RBP25.01■■□□□ 1.59
SHROOM1-202ENST00000378676 CDC42BPGQ6DT37 1551 aa25.01■■□□□ 1.59
SHROOM1-202ENST00000378676 MAP2P11137 1827 aaKnown RBP25■■□□□ 1.59
SHROOM1-202ENST00000378676 DLC1Q96QB1 1528 aa24.99■■□□□ 1.59
SHROOM1-202ENST00000378676 ZKSCAN2Q63HK3 967 aa24.99■■□□□ 1.59
SHROOM1-202ENST00000378676 HDGFL2Q7Z4V5 671 aaPredicted RBP24.99■■□□□ 1.59
SHROOM1-202ENST00000378676 CABP1Q9NZU7 370 aa24.99■■□□□ 1.59
SHROOM1-202ENST00000378676 PDZRN3Q9UPQ7 1066 aa24.99■■□□□ 1.59
SHROOM1-202ENST00000378676 A2ML1A8K2U0 1454 aa24.99■■□□□ 1.59
SHROOM1-202ENST00000378676 NFKBIBQ15653 356 aa24.98■■□□□ 1.59
SHROOM1-202ENST00000378676 PNPLA6Q8IY17 1366 aa24.98■■□□□ 1.59
SHROOM1-202ENST00000378676 SPATA31D1Q6ZQQ2 1576 aa24.98■■□□□ 1.59
SHROOM1-202ENST00000378676 STAG3Q9UJ98 1225 aa24.97■■□□□ 1.59
SHROOM1-202ENST00000378676 AGLP35573 1532 aa24.97■■□□□ 1.59
SHROOM1-202ENST00000378676 CT47B1P0C2W7 299 aaPredicted RBP24.96■■□□□ 1.59
SHROOM1-202ENST00000378676 DZIP1LQ8IYY4 767 aaKnown RBP24.96■■□□□ 1.59
SHROOM1-202ENST00000378676 SMC4Q9NTJ3 1288 aa24.96■■□□□ 1.59
SHROOM1-202ENST00000378676 DIAPH1O60610 1272 aaKnown RBP24.96■■□□□ 1.59
SHROOM1-202ENST00000378676 NRXN3Q9Y4C0 1643 aa24.96■■□□□ 1.59
SHROOM1-202ENST00000378676 FTSJ3Q8IY81 847 aaKnown RBP24.95■■□□□ 1.58
SHROOM1-202ENST00000378676 SSH1Q8WYL5 1049 aa24.95■■□□□ 1.58
SHROOM1-202ENST00000378676 ATP7BP35670 1465 aa24.94■■□□□ 1.58
SHROOM1-202ENST00000378676 RIPK4P57078 832 aa24.94■■□□□ 1.58
SHROOM1-202ENST00000378676 WAPLQ7Z5K2 1190 aa24.94■■□□□ 1.58
SHROOM1-202ENST00000378676 RIMS2Q9UQ26 1411 aa24.93■■□□□ 1.58
SHROOM1-202ENST00000378676 TRIM27P14373 513 aa24.93■■□□□ 1.58
SHROOM1-202ENST00000378676 RWDD1Q9H446 243 aaPredicted RBP24.93■■□□□ 1.58
SHROOM1-202ENST00000378676 IL16Q14005 1332 aa24.93■■□□□ 1.58
SHROOM1-202ENST00000378676 FBLN1P23142 703 aa24.92■■□□□ 1.58
SHROOM1-202ENST00000378676 ZMYM3Q14202 1370 aa24.92■■□□□ 1.58
SHROOM1-202ENST00000378676 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.91■■□□□ 1.58
SHROOM1-202ENST00000378676 FAM135BQ49AJ0 1406 aa24.91■■□□□ 1.58
SHROOM1-202ENST00000378676 PPP6R1Q9UPN7 881 aa24.89■■□□□ 1.58
SHROOM1-202ENST00000378676 ATF7IPQ6VMQ6 1270 aa24.87■■□□□ 1.57
SHROOM1-202ENST00000378676 NOB1Q9ULX3 412 aaKnown RBP24.87■■□□□ 1.57
SHROOM1-202ENST00000378676 RSPH6AQ9H0K4 717 aa24.87■■□□□ 1.57
SHROOM1-202ENST00000378676 POLKQ9UBT6 870 aa24.87■■□□□ 1.57
SHROOM1-202ENST00000378676 DLG5Q8TDM6 1919 aa24.86■■□□□ 1.57
SHROOM1-202ENST00000378676 ITPRIPQ8IWB1 547 aa24.86■■□□□ 1.57
SHROOM1-202ENST00000378676 MON2Q7Z3U7 1717 aa24.86■■□□□ 1.57
SHROOM1-202ENST00000378676 PRKAR2BP31323 418 aa24.85■■□□□ 1.57
SHROOM1-202ENST00000378676 KNDC1Q76NI1 1749 aa24.84■■□□□ 1.57
SHROOM1-202ENST00000378676 FCHSD2O94868 740 aa24.83■■□□□ 1.57
SHROOM1-202ENST00000378676 TRHP20396 242 aaPredicted RBP24.83■■□□□ 1.57
SHROOM1-202ENST00000378676 MLECQ14165 292 aa24.83■■□□□ 1.57
SHROOM1-202ENST00000378676 TMEM57Q8N5G2 664 aa24.83■■□□□ 1.57
SHROOM1-202ENST00000378676 DNAJC5Q9H3Z4 198 aa24.83■■□□□ 1.57
SHROOM1-202ENST00000378676 DDX19BQ9UMR2 479 aa24.83■■□□□ 1.57
SHROOM1-202ENST00000378676 PNNQ9H307 717 aaKnown RBP24.83■■□□□ 1.57
SHROOM1-202ENST00000378676 CPSF1Q10570 1443 aaKnown RBP24.82■■□□□ 1.56
SHROOM1-202ENST00000378676 PPIP5K1Q6PFW1 1433 aa24.82■■□□□ 1.56
SHROOM1-202ENST00000378676 AKAP12Q02952 1782 aa24.82■■□□□ 1.56
SHROOM1-202ENST00000378676 FRAT2O75474 233 aaPredicted RBP24.82■■□□□ 1.56
SHROOM1-202ENST00000378676 ITSN1Q15811 1721 aa24.82■■□□□ 1.56
SHROOM1-202ENST00000378676 HDAC1Q13547 482 aaPredicted RBP24.81■■□□□ 1.56
SHROOM1-202ENST00000378676 METP08581 1390 aa24.81■■□□□ 1.56
SHROOM1-202ENST00000378676 EDC4Q6P2E9 1401 aaKnown RBP24.8■■□□□ 1.56
SHROOM1-202ENST00000378676 TBC1D32Q96NH3 1257 aa24.8■■□□□ 1.56
SHROOM1-202ENST00000378676 EMILIN1Q9Y6C2 1016 aa24.8■■□□□ 1.56
SHROOM1-202ENST00000378676 HMOX1P09601 288 aa24.8■■□□□ 1.56
SHROOM1-202ENST00000378676 PHACTR3Q96KR7 559 aa24.8■■□□□ 1.56
SHROOM1-202ENST00000378676 KIF16BQ96L93 1317 aa24.8■■□□□ 1.56
SHROOM1-202ENST00000378676 CPS1P31327 1500 aa24.79■■□□□ 1.56
SHROOM1-202ENST00000378676 NME9Q86XW9 330 aa24.79■■□□□ 1.56
SHROOM1-202ENST00000378676 ZRANB1Q9UGI0 708 aa24.79■■□□□ 1.56
SHROOM1-202ENST00000378676 CDK12Q9NYV4 1490 aaPredicted RBP24.78■■□□□ 1.56
SHROOM1-202ENST00000378676 GSE1Q14687 1217 aa24.78■■□□□ 1.56
SHROOM1-202ENST00000378676 C3P01024 1663 aa24.78■■□□□ 1.56
SHROOM1-202ENST00000378676 WASLO00401 505 aaPredicted RBP24.77■■□□□ 1.56
SHROOM1-202ENST00000378676 THUMPD2Q9BTF0 503 aaKnown RBP24.77■■□□□ 1.56
SHROOM1-202ENST00000378676 ZBTB40Q9NUA8 1239 aa24.76■■□□□ 1.55
SHROOM1-202ENST00000378676 ALDH1L2Q3SY69 923 aa24.76■■□□□ 1.55
SHROOM1-202ENST00000378676 BECN1Q14457 450 aa24.75■■□□□ 1.55
SHROOM1-202ENST00000378676 NFE2L2Q16236 605 aa24.75■■□□□ 1.55
SHROOM1-202ENST00000378676 UPF2Q9HAU5 1272 aaKnown RBP24.75■■□□□ 1.55
SHROOM1-202ENST00000378676 NCKAP5LQ9HCH0 1330 aa24.75■■□□□ 1.55
SHROOM1-202ENST00000378676 SMC5Q8IY18 1101 aa24.74■■□□□ 1.55
SHROOM1-202ENST00000378676 IL13P35225 146 aa24.74■■□□□ 1.55
SHROOM1-202ENST00000378676 TXNDC2Q86VQ3 553 aa24.73■■□□□ 1.55
SHROOM1-202ENST00000378676 IPO8O15397 1037 aaKnown RBP24.73■■□□□ 1.55
SHROOM1-202ENST00000378676 SLKQ9H2G2 1235 aaPredicted RBP24.72■■□□□ 1.55
SHROOM1-202ENST00000378676 AATKQ6ZMQ8 1374 aa24.7■■□□□ 1.54
SHROOM1-202ENST00000378676 IL27Q8NEV9 243 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms