RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 DIAPH1O60610 1272 aaKnown RBP37.35■■■■□ 3.57
SSBP3-204ENST00000371320 CLUAP1Q96AJ1 413 aa37.34■■■■□ 3.57
SSBP3-204ENST00000371320 TMPOP42166 694 aaKnown RBP37.33■■■■□ 3.57
SSBP3-204ENST00000371320 KIF20BQ96Q89 1820 aa37.33■■■■□ 3.57
SSBP3-204ENST00000371320 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.33■■■■□ 3.57
SSBP3-204ENST00000371320 PNPLA6Q8IY17 1366 aa37.33■■■■□ 3.57
SSBP3-204ENST00000371320 NRXN3Q9Y4C0 1643 aa37.31■■■■□ 3.56
SSBP3-204ENST00000371320 METP08581 1390 aa37.31■■■■□ 3.56
SSBP3-204ENST00000371320 HDGFP51858 240 aaKnown RBP37.3■■■■□ 3.56
SSBP3-204ENST00000371320 PNNQ9H307 717 aaKnown RBP37.29■■■■□ 3.56
SSBP3-204ENST00000371320 WASLO00401 505 aaPredicted RBP37.29■■■■□ 3.56
SSBP3-204ENST00000371320 IGHDP01880 384 aa37.29■■■■□ 3.56
SSBP3-204ENST00000371320 BCL2L13Q9BXK5 485 aa37.29■■■■□ 3.56
SSBP3-204ENST00000371320 TRIM35Q9UPQ4 493 aa37.27■■■■□ 3.56
SSBP3-204ENST00000371320 RGS3P49796 1198 aa37.26■■■■□ 3.56
SSBP3-204ENST00000371320 AAMPQ13685 434 aa37.25■■■■□ 3.55
SSBP3-204ENST00000371320 FAM161AQ3B820 660 aa37.25■■■■□ 3.55
SSBP3-204ENST00000371320 TXNDC2Q86VQ3 553 aa37.25■■■■□ 3.55
SSBP3-204ENST00000371320 TNRQ92752 1358 aa37.25■■■■□ 3.55
SSBP3-204ENST00000371320 CT47B1P0C2W7 299 aaPredicted RBP37.25■■■■□ 3.55
SSBP3-204ENST00000371320 TSR2Q969E8 191 aaKnown RBP37.24■■■■□ 3.55
SSBP3-204ENST00000371320 RLBP1P12271 317 aa37.22■■■■□ 3.55
SSBP3-204ENST00000371320 POLKQ9UBT6 870 aa37.22■■■■□ 3.55
SSBP3-204ENST00000371320 PPIP5K1Q6PFW1 1433 aa37.21■■■■□ 3.55
SSBP3-204ENST00000371320 RIPK4P57078 832 aa37.21■■■■□ 3.55
SSBP3-204ENST00000371320 SIRT1Q96EB6 747 aa37.21■■■■□ 3.55
SSBP3-204ENST00000371320 CPSF1Q10570 1443 aaKnown RBP37.2■■■■□ 3.55
SSBP3-204ENST00000371320 IL16Q14005 1332 aa37.2■■■■□ 3.55
SSBP3-204ENST00000371320 PPM1GO15355 546 aaPredicted RBP37.2■■■■□ 3.55
SSBP3-204ENST00000371320 TNNQ9UQP3 1299 aa37.2■■■■□ 3.55
SSBP3-204ENST00000371320 FAM135BQ49AJ0 1406 aa37.19■■■■□ 3.54
SSBP3-204ENST00000371320 EDC4Q6P2E9 1401 aaKnown RBP37.19■■■■□ 3.54
SSBP3-204ENST00000371320 FCHSD2O94868 740 aa37.19■■■■□ 3.54
SSBP3-204ENST00000371320 C8orf34Q49A92 452 aa37.19■■■■□ 3.54
SSBP3-204ENST00000371320 EXOSC9Q06265 439 aaKnown RBP37.17■■■■□ 3.54
SSBP3-204ENST00000371320 FBLN1P23142 703 aa37.17■■■■□ 3.54
SSBP3-204ENST00000371320 TECPR2O15040 1411 aa37.17■■■■□ 3.54
SSBP3-204ENST00000371320 NUDT16Q96DE0 195 aaKnown RBP37.16■■■■□ 3.54
SSBP3-204ENST00000371320 CDC42BPGQ6DT37 1551 aa37.16■■■■□ 3.54
SSBP3-204ENST00000371320 PMFBP1Q8TBY8 1022 aa37.14■■■■□ 3.54
SSBP3-204ENST00000371320 TMEM2Q9UHN6 1383 aa37.14■■■■□ 3.54
SSBP3-204ENST00000371320 ZKSCAN2Q63HK3 967 aa37.14■■■■□ 3.54
SSBP3-204ENST00000371320 DDRGK1Q96HY6 314 aa37.14■■■■□ 3.54
SSBP3-204ENST00000371320 KNDC1Q76NI1 1749 aa37.13■■■■□ 3.53
SSBP3-204ENST00000371320 CCDC61Q9Y6R9 512 aa37.13■■■■□ 3.53
SSBP3-204ENST00000371320 NBR1Q14596 966 aa37.12■■■■□ 3.53
SSBP3-204ENST00000371320 NME9Q86XW9 330 aa37.11■■■■□ 3.53
SSBP3-204ENST00000371320 RSPH6AQ9H0K4 717 aa37.11■■■■□ 3.53
SSBP3-204ENST00000371320 SMC4Q9NTJ3 1288 aa37.11■■■■□ 3.53
SSBP3-204ENST00000371320 NEFMP07197 916 aa37.1■■■■□ 3.53
SSBP3-204ENST00000371320 PRKAR2BP31323 418 aa37.09■■■■□ 3.53
SSBP3-204ENST00000371320 CPS1P31327 1500 aa37.09■■■■□ 3.53
SSBP3-204ENST00000371320 PCDHB15Q9Y5E8 787 aa37.09■■■■□ 3.53
SSBP3-204ENST00000371320 LRRC7Q96NW7 1537 aa37.09■■■■□ 3.53
SSBP3-204ENST00000371320 FTSJ3Q8IY81 847 aaKnown RBP37.08■■■■□ 3.53
SSBP3-204ENST00000371320 MVPQ14764 893 aaKnown RBP37.08■■■■□ 3.53
SSBP3-204ENST00000371320 DZIP1LQ8IYY4 767 aaKnown RBP37.08■■■■□ 3.53
SSBP3-204ENST00000371320 NCKAP5LQ9HCH0 1330 aa37.07■■■■□ 3.52
SSBP3-204ENST00000371320 UBR1Q8IWV7 1749 aa37.06■■■■□ 3.52
SSBP3-204ENST00000371320 EMILIN1Q9Y6C2 1016 aa37.06■■■■□ 3.52
SSBP3-204ENST00000371320 TRHP20396 242 aaPredicted RBP37.06■■■■□ 3.52
SSBP3-204ENST00000371320 SSH1Q8WYL5 1049 aa37.05■■■■□ 3.52
SSBP3-204ENST00000371320 ZRANB1Q9UGI0 708 aa37.05■■■■□ 3.52
SSBP3-204ENST00000371320 COG3Q96JB2 828 aa37.04■■■■□ 3.52
SSBP3-204ENST00000371320 MAP2P11137 1827 aaKnown RBP37.04■■■■□ 3.52
SSBP3-204ENST00000371320 AATKQ6ZMQ8 1374 aa37.03■■■■□ 3.52
SSBP3-204ENST00000371320 RWDD1Q9H446 243 aaPredicted RBP37.01■■■■□ 3.52
SSBP3-204ENST00000371320 ROBO2Q9HCK4 1378 aa37.01■■■■□ 3.51
SSBP3-204ENST00000371320 HMOX1P09601 288 aa37■■■■□ 3.51
SSBP3-204ENST00000371320 ZNF692Q9BU19 519 aaPredicted RBP37■■■■□ 3.51
SSBP3-204ENST00000371320 IL13P35225 146 aa37■■■■□ 3.51
SSBP3-204ENST00000371320 ADAMTS13Q76LX8 1427 aa36.99■■■■□ 3.51
SSBP3-204ENST00000371320 CDK12Q9NYV4 1490 aaPredicted RBP36.99■■■■□ 3.51
SSBP3-204ENST00000371320 NFE2L2Q16236 605 aa36.98■■■■□ 3.51
SSBP3-204ENST00000371320 TRIM27P14373 513 aa36.98■■■■□ 3.51
SSBP3-204ENST00000371320 MON2Q7Z3U7 1717 aa36.98■■■■□ 3.51
SSBP3-204ENST00000371320 PRR36Q9H6K5 1346 aa36.98■■■■□ 3.51
SSBP3-204ENST00000371320 PHACTR3Q96KR7 559 aa36.97■■■■□ 3.51
SSBP3-204ENST00000371320 ATF7IPQ6VMQ6 1270 aa36.97■■■■□ 3.51
SSBP3-204ENST00000371320 PLEKHG1Q9ULL1 1385 aa36.95■■■■□ 3.51
SSBP3-204ENST00000371320 NOB1Q9ULX3 412 aaKnown RBP36.95■■■■□ 3.51
SSBP3-204ENST00000371320 LTKP29376 864 aa36.94■■■■□ 3.5
SSBP3-204ENST00000371320 RRS1Q15050 365 aaKnown RBP36.92■■■■□ 3.5
SSBP3-204ENST00000371320 AKAP12Q02952 1782 aa36.92■■■■□ 3.5
SSBP3-204ENST00000371320 CALD1Q05682 793 aaKnown RBP36.91■■■■□ 3.5
SSBP3-204ENST00000371320 LAS1LQ9Y4W2 734 aaKnown RBP36.91■■■■□ 3.5
SSBP3-204ENST00000371320 ITSN1Q15811 1721 aa36.91■■■■□ 3.5
SSBP3-204ENST00000371320 KIF16BQ96L93 1317 aa36.91■■■■□ 3.5
SSBP3-204ENST00000371320 DDX19BQ9UMR2 479 aa36.9■■■■□ 3.5
SSBP3-204ENST00000371320 C3P01024 1663 aa36.9■■■■□ 3.5
SSBP3-204ENST00000371320 ALDH1L2Q3SY69 923 aa36.9■■■■□ 3.5
SSBP3-204ENST00000371320 ITPRIPQ8IWB1 547 aa36.9■■■■□ 3.5
SSBP3-204ENST00000371320 PDZRN3Q9UPQ7 1066 aa36.9■■■■□ 3.5
SSBP3-204ENST00000371320 IPO8O15397 1037 aaKnown RBP36.89■■■■□ 3.5
SSBP3-204ENST00000371320 CEBPAP49715 358 aaPredicted RBP36.89■■■■□ 3.5
SSBP3-204ENST00000371320 RTL5Q5HYW3 569 aaPredicted RBP36.89■■■■□ 3.5
SSBP3-204ENST00000371320 DAXXQ9UER7 740 aaPredicted RBP36.86■■■■□ 3.49
SSBP3-204ENST00000371320 EID1Q9Y6B2 187 aa36.86■■■■□ 3.49
SSBP3-204ENST00000371320 ZNF428Q96B54 188 aa36.85■■■■□ 3.49
SSBP3-204ENST00000371320 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.84■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms