RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 RAPGEF4Q8WZA2 1011 aa6.62□□□□□ -1.35
SMNDC1-202ENST00000369603 LRPPRCP42704 1394 aaKnown RBP6.61□□□□□ -1.35
SMNDC1-202ENST00000369603 KCNJ4P48050 445 aa6.61□□□□□ -1.35
SMNDC1-202ENST00000369603 CEBPAP49715 358 aaPredicted RBP6.61□□□□□ -1.35
SMNDC1-202ENST00000369603 MFAP1P55081 439 aaKnown RBP6.61□□□□□ -1.35
SMNDC1-202ENST00000369603 DUSP27Q5VZP5 1158 aa6.61□□□□□ -1.35
SMNDC1-202ENST00000369603 KIAA1211Q6ZU35 1233 aa6.61□□□□□ -1.35
SMNDC1-202ENST00000369603 PLA2R1Q13018 1463 aa6.61□□□□□ -1.35
SMNDC1-202ENST00000369603 TSR2Q969E8 191 aaKnown RBP6.61□□□□□ -1.35
SMNDC1-202ENST00000369603 USP35Q9P2H5 1018 aa6.61□□□□□ -1.35
SMNDC1-202ENST00000369603 ABCA9Q8IUA7 1624 aa6.61□□□□□ -1.35
SMNDC1-202ENST00000369603 PLEKHO1Q53GL0 409 aaPredicted RBP6.61□□□□□ -1.35
SMNDC1-202ENST00000369603 NUTM2GQ5VZR2 741 aa6.61□□□□□ -1.35
SMNDC1-202ENST00000369603 ATF7IPQ6VMQ6 1270 aa6.61□□□□□ -1.35
SMNDC1-202ENST00000369603 RRS1Q15050 365 aaKnown RBP6.6□□□□□ -1.35
SMNDC1-202ENST00000369603 NME9Q86XW9 330 aa6.6□□□□□ -1.35
SMNDC1-202ENST00000369603 KCNH5Q8NCM2 988 aa6.6□□□□□ -1.35
SMNDC1-202ENST00000369603 IL16Q14005 1332 aa6.6□□□□□ -1.35
SMNDC1-202ENST00000369603 FYB1O15117 783 aa6.6□□□□□ -1.35
SMNDC1-202ENST00000369603 DDX58O95786 925 aaKnown RBP6.6□□□□□ -1.35
SMNDC1-202ENST00000369603 FKBP5Q13451 457 aaPredicted RBP6.6□□□□□ -1.35
SMNDC1-202ENST00000369603 TTC5Q8N0Z6 440 aa6.6□□□□□ -1.35
SMNDC1-202ENST00000369603 MVPQ14764 893 aaKnown RBP6.6□□□□□ -1.35
SMNDC1-202ENST00000369603 CCDC27Q2M243 656 aa6.6□□□□□ -1.35
SMNDC1-202ENST00000369603 CCDC30Q5VVM6 783 aa6.6□□□□□ -1.35
SMNDC1-202ENST00000369603 CARD14Q9BXL6 1004 aa6.6□□□□□ -1.35
SMNDC1-202ENST00000369603 TTC21BQ7Z4L5 1316 aa6.6□□□□□ -1.35
SMNDC1-202ENST00000369603 KIF1BO60333 1816 aa6.59□□□□□ -1.35
SMNDC1-202ENST00000369603 PTMSP20962 102 aa6.59□□□□□ -1.35
SMNDC1-202ENST00000369603 NEXNQ0ZGT2 675 aa6.59□□□□□ -1.35
SMNDC1-202ENST00000369603 ANO8Q9HCE9 1232 aaPredicted RBP6.59□□□□□ -1.35
SMNDC1-202ENST00000369603 ALDH1L2Q3SY69 923 aa6.59□□□□□ -1.35
SMNDC1-202ENST00000369603 IFT57Q9NWB7 429 aa6.59□□□□□ -1.35
SMNDC1-202ENST00000369603 YEATS2Q9ULM3 1422 aa6.59□□□□□ -1.35
SMNDC1-202ENST00000369603 TTC21AQ8NDW8 1320 aa6.59□□□□□ -1.35
SMNDC1-202ENST00000369603 ZFYVE9O95405 1425 aa6.59□□□□□ -1.35
SMNDC1-202ENST00000369603 RARSP54136 660 aaKnown RBP6.59□□□□□ -1.35
SMNDC1-202ENST00000369603 NOB1Q9ULX3 412 aaKnown RBP6.59□□□□□ -1.35
SMNDC1-202ENST00000369603 PRDM15P57071 1507 aaPredicted RBP6.59□□□□□ -1.35
SMNDC1-202ENST00000369603 EFCAB6Q5THR3 1501 aa6.59□□□□□ -1.35
SMNDC1-202ENST00000369603 CFAP65Q6ZU64 1925 aaKnown RBP6.59□□□□□ -1.35
SMNDC1-202ENST00000369603 EVA1CP58658 441 aa6.59□□□□□ -1.36
SMNDC1-202ENST00000369603 KDM5AP29375 1690 aaKnown RBP6.58□□□□□ -1.36
SMNDC1-202ENST00000369603 PPIP5K1Q6PFW1 1433 aa6.58□□□□□ -1.36
SMNDC1-202ENST00000369603 GNAI3P08754 354 aa6.58□□□□□ -1.36
SMNDC1-202ENST00000369603 EIF2S2P20042 333 aaKnown RBP6.58□□□□□ -1.36
SMNDC1-202ENST00000369603 GCC1Q96CN9 775 aa6.58□□□□□ -1.36
SMNDC1-202ENST00000369603 NLRP2Q9NX02 1062 aa6.58□□□□□ -1.36
SMNDC1-202ENST00000369603 PHF8Q9UPP1 1060 aa6.58□□□□□ -1.36
SMNDC1-202ENST00000369603 TRIM6-TRIM34B2RNG4 842 aa6.58□□□□□ -1.36
SMNDC1-202ENST00000369603 NAP1L5Q96NT1 182 aaPredicted RBP6.58□□□□□ -1.36
SMNDC1-202ENST00000369603 EMILIN1Q9Y6C2 1016 aa6.58□□□□□ -1.36
SMNDC1-202ENST00000369603 ACEP12821 1306 aa6.58□□□□□ -1.36
SMNDC1-202ENST00000369603 ARHGAP31Q2M1Z3 1444 aa6.58□□□□□ -1.36
SMNDC1-202ENST00000369603 HSP90AB4PQ58FF6 505 aa6.58□□□□□ -1.36
SMNDC1-202ENST00000369603 GBP4Q96PP9 640 aa6.58□□□□□ -1.36
SMNDC1-202ENST00000369603 TBX22Q9Y458 520 aa6.58□□□□□ -1.36
SMNDC1-202ENST00000369603 A0A1W2PP64 1363 aa6.57□□□□□ -1.36
SMNDC1-202ENST00000369603 PRKCSHP14314 528 aaPredicted RBP6.57□□□□□ -1.36
SMNDC1-202ENST00000369603 IL27Q8NEV9 243 aa6.57□□□□□ -1.36
SMNDC1-202ENST00000369603 C9orf78Q9NZ63 289 aaPredicted RBP6.57□□□□□ -1.36
SMNDC1-202ENST00000369603 FGD1P98174 961 aa6.57□□□□□ -1.36
SMNDC1-202ENST00000369603 SIRT1Q96EB6 747 aa6.57□□□□□ -1.36
SMNDC1-202ENST00000369603 ABCC3O15438 1527 aa6.57□□□□□ -1.36
SMNDC1-202ENST00000369603 REC8O95072 547 aa6.57□□□□□ -1.36
SMNDC1-202ENST00000369603 SLC4A3P48751 1232 aa6.57□□□□□ -1.36
SMNDC1-202ENST00000369603 CCT4P50991 539 aaKnown RBP6.57□□□□□ -1.36
SMNDC1-202ENST00000369603 GSE1Q14687 1217 aa6.57□□□□□ -1.36
SMNDC1-202ENST00000369603 NCBP3Q53F19 620 aaKnown RBP6.57□□□□□ -1.36
SMNDC1-202ENST00000369603 SYNMO15061 1565 aa6.56□□□□□ -1.36
SMNDC1-202ENST00000369603 ST18O60284 1047 aa6.56□□□□□ -1.36
SMNDC1-202ENST00000369603 BACH2Q9BYV9 841 aa6.56□□□□□ -1.36
SMNDC1-202ENST00000369603 LNPKQ9C0E8 428 aa6.56□□□□□ -1.36
SMNDC1-202ENST00000369603 SLKQ9H2G2 1235 aaPredicted RBP6.56□□□□□ -1.36
SMNDC1-202ENST00000369603 PDZRN3Q9UPQ7 1066 aa6.56□□□□□ -1.36
SMNDC1-202ENST00000369603 SPHKAPQ2M3C7 1700 aa6.56□□□□□ -1.36
SMNDC1-202ENST00000369603 GNAT3A8MTJ3 354 aa6.56□□□□□ -1.36
SMNDC1-202ENST00000369603 TATP17735 454 aaPredicted RBP6.56□□□□□ -1.36
SMNDC1-202ENST00000369603 TRIM44Q96DX7 344 aaPredicted RBP6.56□□□□□ -1.36
SMNDC1-202ENST00000369603 ZNF330Q9Y3S2 320 aaPredicted RBP6.56□□□□□ -1.36
SMNDC1-202ENST00000369603 NPHP1O15259 732 aa6.55□□□□□ -1.36
SMNDC1-202ENST00000369603 SLC4A2P04920 1241 aa6.55□□□□□ -1.36
SMNDC1-202ENST00000369603 UBTFL1P0CB47 393 aaPredicted RBP6.55□□□□□ -1.36
SMNDC1-202ENST00000369603 ZNF530Q6P9A1 599 aaPredicted RBP6.55□□□□□ -1.36
SMNDC1-202ENST00000369603 SSH1Q8WYL5 1049 aa6.55□□□□□ -1.36
SMNDC1-202ENST00000369603 NECTIN2Q92692 538 aa6.55□□□□□ -1.36
SMNDC1-202ENST00000369603 TRPM1Q7Z4N2 1603 aa6.55□□□□□ -1.36
SMNDC1-202ENST00000369603 BLMP54132 1417 aaPredicted RBP6.55□□□□□ -1.36
SMNDC1-202ENST00000369603 TMEM2Q9UHN6 1383 aa6.55□□□□□ -1.36
SMNDC1-202ENST00000369603 UGGT1Q9NYU2 1555 aa6.55□□□□□ -1.36
SMNDC1-202ENST00000369603 HDGFL1Q5TGJ6 251 aa6.55□□□□□ -1.36
SMNDC1-202ENST00000369603 EDC4Q6P2E9 1401 aaKnown RBP6.55□□□□□ -1.36
SMNDC1-202ENST00000369603 LMTK2Q8IWU2 1503 aa6.55□□□□□ -1.36
SMNDC1-202ENST00000369603 TAF7LQ5H9L4 462 aa6.54□□□□□ -1.36
SMNDC1-202ENST00000369603 INTS3Q68E01 1043 aaKnown RBP6.54□□□□□ -1.36
SMNDC1-202ENST00000369603 SPRYD3Q8NCJ5 442 aa6.54□□□□□ -1.36
SMNDC1-202ENST00000369603 POLKQ9UBT6 870 aa6.54□□□□□ -1.36
SMNDC1-202ENST00000369603 CHMP3Q9Y3E7 222 aa6.54□□□□□ -1.36
SMNDC1-202ENST00000369603 ERVK-7P63135 1459 aa6.54□□□□□ -1.36
SMNDC1-202ENST00000369603 CLTCL1P53675 1640 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms