RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 ANKRD26Q9UPS8 1709 aa22.49■■□□□ 1.19
TRIM11-202ENST00000366699 ADGRB2O60241 1585 aa22.49■■□□□ 1.19
TRIM11-202ENST00000366699 CT47B1P0C2W7 299 aaPredicted RBP22.49■■□□□ 1.19
TRIM11-202ENST00000366699 WAPLQ7Z5K2 1190 aa22.48■■□□□ 1.19
TRIM11-202ENST00000366699 DIAPH1O60610 1272 aaKnown RBP22.48■■□□□ 1.19
TRIM11-202ENST00000366699 C8orf34Q49A92 452 aa22.48■■□□□ 1.19
TRIM11-202ENST00000366699 COL3A1P02461 1466 aaPredicted RBP22.47■■□□□ 1.19
TRIM11-202ENST00000366699 CLUAP1Q96AJ1 413 aa22.47■■□□□ 1.19
TRIM11-202ENST00000366699 PLEKHF1Q96S99 279 aa22.47■■□□□ 1.19
TRIM11-202ENST00000366699 PNPLA6Q8IY17 1366 aa22.46■■□□□ 1.19
TRIM11-202ENST00000366699 SIRT1Q96EB6 747 aa22.46■■□□□ 1.19
TRIM11-202ENST00000366699 RGS3P49796 1198 aa22.46■■□□□ 1.19
TRIM11-202ENST00000366699 FRAT1Q92837 279 aaPredicted RBP22.46■■□□□ 1.19
TRIM11-202ENST00000366699 PPM1GO15355 546 aaPredicted RBP22.45■■□□□ 1.18
TRIM11-202ENST00000366699 WASLO00401 505 aaPredicted RBP22.44■■□□□ 1.18
TRIM11-202ENST00000366699 TMPOP42166 694 aaKnown RBP22.44■■□□□ 1.18
TRIM11-202ENST00000366699 PANK1Q8TE04 598 aa22.44■■□□□ 1.18
TRIM11-202ENST00000366699 COG6Q9Y2V7 657 aa22.44■■□□□ 1.18
TRIM11-202ENST00000366699 USP35Q9P2H5 1018 aa22.43■■□□□ 1.18
TRIM11-202ENST00000366699 SETD1AO15047 1707 aaKnown RBP22.43■■□□□ 1.18
TRIM11-202ENST00000366699 TNRQ92752 1358 aa22.43■■□□□ 1.18
TRIM11-202ENST00000366699 IGHDP01880 384 aa22.43■■□□□ 1.18
TRIM11-202ENST00000366699 VIRMAQ69YN4 1812 aaKnown RBP22.43■■□□□ 1.18
TRIM11-202ENST00000366699 IL16Q14005 1332 aa22.42■■□□□ 1.18
TRIM11-202ENST00000366699 FAM135BQ49AJ0 1406 aa22.42■■□□□ 1.18
TRIM11-202ENST00000366699 NEFMP07197 916 aa22.41■■□□□ 1.18
TRIM11-202ENST00000366699 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.41■■□□□ 1.18
TRIM11-202ENST00000366699 METP08581 1390 aa22.4■■□□□ 1.18
TRIM11-202ENST00000366699 FCHSD2O94868 740 aa22.4■■□□□ 1.18
TRIM11-202ENST00000366699 KIF20BQ96Q89 1820 aa22.4■■□□□ 1.18
TRIM11-202ENST00000366699 EDC4Q6P2E9 1401 aaKnown RBP22.4■■□□□ 1.18
TRIM11-202ENST00000366699 LAS1LQ9Y4W2 734 aaKnown RBP22.39■■□□□ 1.17
TRIM11-202ENST00000366699 TECPR2O15040 1411 aa22.39■■□□□ 1.17
TRIM11-202ENST00000366699 NRXN3Q9Y4C0 1643 aa22.38■■□□□ 1.17
TRIM11-202ENST00000366699 PMFBP1Q8TBY8 1022 aa22.38■■□□□ 1.17
TRIM11-202ENST00000366699 DAXXQ9UER7 740 aaPredicted RBP22.38■■□□□ 1.17
TRIM11-202ENST00000366699 CPSF1Q10570 1443 aaKnown RBP22.38■■□□□ 1.17
TRIM11-202ENST00000366699 PPIP5K1Q6PFW1 1433 aa22.38■■□□□ 1.17
TRIM11-202ENST00000366699 TXNDC2Q86VQ3 553 aa22.37■■□□□ 1.17
TRIM11-202ENST00000366699 TRIM35Q9UPQ4 493 aa22.37■■□□□ 1.17
TRIM11-202ENST00000366699 RIPK4P57078 832 aa22.36■■□□□ 1.17
TRIM11-202ENST00000366699 TMEM2Q9UHN6 1383 aa22.36■■□□□ 1.17
TRIM11-202ENST00000366699 POLKQ9UBT6 870 aa22.36■■□□□ 1.17
TRIM11-202ENST00000366699 CCDC61Q9Y6R9 512 aa22.36■■□□□ 1.17
TRIM11-202ENST00000366699 ZKSCAN2Q63HK3 967 aa22.35■■□□□ 1.17
TRIM11-202ENST00000366699 NUDT16Q96DE0 195 aaKnown RBP22.35■■□□□ 1.17
TRIM11-202ENST00000366699 CDC42BPGQ6DT37 1551 aa22.35■■□□□ 1.17
TRIM11-202ENST00000366699 BCL2L13Q9BXK5 485 aa22.33■■□□□ 1.17
TRIM11-202ENST00000366699 KNDC1Q76NI1 1749 aa22.33■■□□□ 1.17
TRIM11-202ENST00000366699 ZNF692Q9BU19 519 aaPredicted RBP22.33■■□□□ 1.17
TRIM11-202ENST00000366699 RLBP1P12271 317 aa22.32■■□□□ 1.16
TRIM11-202ENST00000366699 CPS1P31327 1500 aa22.32■■□□□ 1.16
TRIM11-202ENST00000366699 FTSJ3Q8IY81 847 aaKnown RBP22.32■■□□□ 1.16
TRIM11-202ENST00000366699 TSR2Q969E8 191 aaKnown RBP22.32■■□□□ 1.16
TRIM11-202ENST00000366699 AATKQ6ZMQ8 1374 aa22.32■■□□□ 1.16
TRIM11-202ENST00000366699 EXOSC9Q06265 439 aaKnown RBP22.31■■□□□ 1.16
TRIM11-202ENST00000366699 COG3Q96JB2 828 aa22.3■■□□□ 1.16
TRIM11-202ENST00000366699 SMC4Q9NTJ3 1288 aa22.3■■□□□ 1.16
TRIM11-202ENST00000366699 CALD1Q05682 793 aaKnown RBP22.3■■□□□ 1.16
TRIM11-202ENST00000366699 DZIP1LQ8IYY4 767 aaKnown RBP22.3■■□□□ 1.16
TRIM11-202ENST00000366699 MVPQ14764 893 aaKnown RBP22.29■■□□□ 1.16
TRIM11-202ENST00000366699 RSPH6AQ9H0K4 717 aa22.29■■□□□ 1.16
TRIM11-202ENST00000366699 PRKAR2BP31323 418 aa22.29■■□□□ 1.16
TRIM11-202ENST00000366699 RWDD1Q9H446 243 aaPredicted RBP22.29■■□□□ 1.16
TRIM11-202ENST00000366699 PCDHB15Q9Y5E8 787 aa22.29■■□□□ 1.16
TRIM11-202ENST00000366699 TNNQ9UQP3 1299 aa22.27■■□□□ 1.16
TRIM11-202ENST00000366699 CDK12Q9NYV4 1490 aaPredicted RBP22.27■■□□□ 1.16
TRIM11-202ENST00000366699 NME9Q86XW9 330 aa22.27■■□□□ 1.16
TRIM11-202ENST00000366699 PLEKHG1Q9ULL1 1385 aa22.26■■□□□ 1.15
TRIM11-202ENST00000366699 UBR1Q8IWV7 1749 aa22.26■■□□□ 1.15
TRIM11-202ENST00000366699 SLC4A3P48751 1232 aa22.25■■□□□ 1.15
TRIM11-202ENST00000366699 ZNF428Q96B54 188 aa22.25■■□□□ 1.15
TRIM11-202ENST00000366699 LRRC7Q96NW7 1537 aa22.25■■□□□ 1.15
TRIM11-202ENST00000366699 IPO8O15397 1037 aaKnown RBP22.25■■□□□ 1.15
TRIM11-202ENST00000366699 NFE2L2Q16236 605 aa22.25■■□□□ 1.15
TRIM11-202ENST00000366699 KIF16BQ96L93 1317 aa22.24■■□□□ 1.15
TRIM11-202ENST00000366699 IL13P35225 146 aa22.24■■□□□ 1.15
TRIM11-202ENST00000366699 SSH1Q8WYL5 1049 aa22.24■■□□□ 1.15
TRIM11-202ENST00000366699 EID1Q9Y6B2 187 aa22.24■■□□□ 1.15
TRIM11-202ENST00000366699 EMILIN1Q9Y6C2 1016 aa22.24■■□□□ 1.15
TRIM11-202ENST00000366699 ALDH1L2Q3SY69 923 aa22.23■■□□□ 1.15
TRIM11-202ENST00000366699 ADAMTS13Q76LX8 1427 aa22.23■■□□□ 1.15
TRIM11-202ENST00000366699 DDX19BQ9UMR2 479 aa22.23■■□□□ 1.15
TRIM11-202ENST00000366699 ATF7IPQ6VMQ6 1270 aa22.23■■□□□ 1.15
TRIM11-202ENST00000366699 ROBO2Q9HCK4 1378 aa22.23■■□□□ 1.15
TRIM11-202ENST00000366699 FBLN1P23142 703 aa22.22■■□□□ 1.15
TRIM11-202ENST00000366699 LMOD3Q0VAK6 560 aa22.21■■□□□ 1.15
TRIM11-202ENST00000366699 USP19O94966 1318 aa22.21■■□□□ 1.15
TRIM11-202ENST00000366699 HMOX1P09601 288 aa22.2■■□□□ 1.14
TRIM11-202ENST00000366699 TRIM27P14373 513 aa22.2■■□□□ 1.14
TRIM11-202ENST00000366699 PDZRN3Q9UPQ7 1066 aa22.2■■□□□ 1.14
TRIM11-202ENST00000366699 MON2Q7Z3U7 1717 aa22.2■■□□□ 1.14
TRIM11-202ENST00000366699 TRHP20396 242 aaPredicted RBP22.19■■□□□ 1.14
TRIM11-202ENST00000366699 NOB1Q9ULX3 412 aaKnown RBP22.19■■□□□ 1.14
TRIM11-202ENST00000366699 PRR36Q9H6K5 1346 aa22.19■■□□□ 1.14
TRIM11-202ENST00000366699 NCKAP5LQ9HCH0 1330 aa22.19■■□□□ 1.14
TRIM11-202ENST00000366699 MAP2P11137 1827 aaKnown RBP22.19■■□□□ 1.14
TRIM11-202ENST00000366699 NFKBIBQ15653 356 aa22.18■■□□□ 1.14
TRIM11-202ENST00000366699 LTKP29376 864 aa22.18■■□□□ 1.14
TRIM11-202ENST00000366699 GNAI1P63096 354 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms