RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 MCM10Q7L590 875 aa17.8■□□□□ 0.44
SIRPA-202ENST00000358771 ABTB2Q8N961 1025 aa17.8■□□□□ 0.44
SIRPA-202ENST00000358771 NFE2L2Q16236 605 aa17.8■□□□□ 0.44
SIRPA-202ENST00000358771 ZFYVE16Q7Z3T8 1539 aa17.8■□□□□ 0.44
SIRPA-202ENST00000358771 API5Q9BZZ5 524 aaKnown RBP17.8■□□□□ 0.44
SIRPA-202ENST00000358771 PSME1Q06323 249 aa17.79■□□□□ 0.44
SIRPA-202ENST00000358771 ZNF692Q9BU19 519 aaPredicted RBP17.79■□□□□ 0.44
SIRPA-202ENST00000358771 BLMP54132 1417 aaPredicted RBP17.78■□□□□ 0.44
SIRPA-202ENST00000358771 CSB-PGBD3P0DP91 1061 aa17.78■□□□□ 0.44
SIRPA-202ENST00000358771 PRDM15P57071 1507 aaPredicted RBP17.78■□□□□ 0.44
SIRPA-202ENST00000358771 FKBP5Q13451 457 aaPredicted RBP17.78■□□□□ 0.44
SIRPA-202ENST00000358771 C22orf23Q9BZE7 217 aa17.77■□□□□ 0.44
SIRPA-202ENST00000358771 POLKQ9UBT6 870 aa17.77■□□□□ 0.44
SIRPA-202ENST00000358771 ERVK-7P63135 1459 aa17.77■□□□□ 0.44
SIRPA-202ENST00000358771 TRPM2O94759 1503 aa17.77■□□□□ 0.44
SIRPA-202ENST00000358771 TRIM6-TRIM34B2RNG4 842 aa17.77■□□□□ 0.43
SIRPA-202ENST00000358771 FRAT2O75474 233 aaPredicted RBP17.76■□□□□ 0.43
SIRPA-202ENST00000358771 PHACTR3Q96KR7 559 aa17.76■□□□□ 0.43
SIRPA-202ENST00000358771 IQGAP3Q86VI3 1631 aa17.76■□□□□ 0.43
SIRPA-202ENST00000358771 NOL8Q76FK4 1167 aaKnown RBP17.76■□□□□ 0.43
SIRPA-202ENST00000358771 AMOTL2Q9Y2J4 779 aa17.75■□□□□ 0.43
SIRPA-202ENST00000358771 NPC1L1Q9UHC9 1359 aa17.75■□□□□ 0.43
SIRPA-202ENST00000358771 TRPM1Q7Z4N2 1603 aa17.75■□□□□ 0.43
SIRPA-202ENST00000358771 GOLGA6L22H0YM25 854 aa17.75■□□□□ 0.43
SIRPA-202ENST00000358771 XPCQ01831 940 aaPredicted RBP17.75■□□□□ 0.43
SIRPA-202ENST00000358771 PLXNC1O60486 1568 aa17.75■□□□□ 0.43
SIRPA-202ENST00000358771 ANP32BQ92688 251 aaKnown RBP17.74■□□□□ 0.43
SIRPA-202ENST00000358771 ZNF428Q96B54 188 aa17.74■□□□□ 0.43
SIRPA-202ENST00000358771 HMMRO75330 724 aa17.74■□□□□ 0.43
SIRPA-202ENST00000358771 SLC4A2P04920 1241 aa17.74■□□□□ 0.43
SIRPA-202ENST00000358771 USP35Q9P2H5 1018 aa17.74■□□□□ 0.43
SIRPA-202ENST00000358771 ZMYM4Q5VZL5 1548 aa17.73■□□□□ 0.43
SIRPA-202ENST00000358771 ESCO1Q5FWF5 840 aa17.73■□□□□ 0.43
SIRPA-202ENST00000358771 AEBP1Q8IUX7 1158 aa17.73■□□□□ 0.43
SIRPA-202ENST00000358771 THEMISQ8N1K5 641 aaPredicted RBP17.73■□□□□ 0.43
SIRPA-202ENST00000358771 AAMPQ13685 434 aa17.73■□□□□ 0.43
SIRPA-202ENST00000358771 HSP90AB2PQ58FF8 381 aa17.73■□□□□ 0.43
SIRPA-202ENST00000358771 YTHDC2Q9H6S0 1430 aaKnown RBP17.73■□□□□ 0.43
SIRPA-202ENST00000358771 NSD2O96028 1365 aa17.73■□□□□ 0.43
SIRPA-202ENST00000358771 UNC13BO14795 1591 aa17.72■□□□□ 0.43
SIRPA-202ENST00000358771 CT47B1P0C2W7 299 aaPredicted RBP17.72■□□□□ 0.43
SIRPA-202ENST00000358771 TEFQ10587 303 aa17.72■□□□□ 0.43
SIRPA-202ENST00000358771 RIMS2Q9UQ26 1411 aa17.71■□□□□ 0.43
SIRPA-202ENST00000358771 CLTCL1P53675 1640 aa17.71■□□□□ 0.43
SIRPA-202ENST00000358771 GSE1Q14687 1217 aa17.71■□□□□ 0.43
SIRPA-202ENST00000358771 RILPL2Q969X0 211 aa17.71■□□□□ 0.43
SIRPA-202ENST00000358771 ACEP12821 1306 aa17.71■□□□□ 0.43
SIRPA-202ENST00000358771 NINLQ9Y2I6 1382 aa17.7■□□□□ 0.42
SIRPA-202ENST00000358771 TSPYL6Q8N831 410 aa17.7■□□□□ 0.42
SIRPA-202ENST00000358771 C8orf34Q49A92 452 aa17.69■□□□□ 0.42
SIRPA-202ENST00000358771 ZNF330Q9Y3S2 320 aaPredicted RBP17.69■□□□□ 0.42
SIRPA-202ENST00000358771 MBIPQ9NS73 344 aa17.69■□□□□ 0.42
SIRPA-202ENST00000358771 FOXD4L5Q5VV16 416 aaPredicted RBP17.69■□□□□ 0.42
SIRPA-202ENST00000358771 FOXD4L4Q8WXT5 416 aaPredicted RBP17.69■□□□□ 0.42
SIRPA-202ENST00000358771 ZNF521Q96K83 1311 aa17.68■□□□□ 0.42
SIRPA-202ENST00000358771 KRT24Q2M2I5 525 aa17.68■□□□□ 0.42
SIRPA-202ENST00000358771 USHBP1Q8N6Y0 703 aa17.68■□□□□ 0.42
SIRPA-202ENST00000358771 SEC24BO95487 1268 aa17.67■□□□□ 0.42
SIRPA-202ENST00000358771 KCNJ4P48050 445 aa17.67■□□□□ 0.42
SIRPA-202ENST00000358771 CCDC27Q2M243 656 aa17.67■□□□□ 0.42
SIRPA-202ENST00000358771 PPIP5K1Q6PFW1 1433 aa17.67■□□□□ 0.42
SIRPA-202ENST00000358771 CHD1LQ86WJ1 897 aa17.67■□□□□ 0.42
SIRPA-202ENST00000358771 TRIM35Q9UPQ4 493 aa17.66■□□□□ 0.42
SIRPA-202ENST00000358771 ZMYM3Q14202 1370 aa17.66■□□□□ 0.42
SIRPA-202ENST00000358771 TNRQ92752 1358 aa17.65■□□□□ 0.42
SIRPA-202ENST00000358771 KDM2BQ8NHM5 1336 aa17.65■□□□□ 0.42
SIRPA-202ENST00000358771 F6X3S4 739 aa17.65■□□□□ 0.42
SIRPA-202ENST00000358771 PUS7Q96PZ0 661 aaKnown RBP17.65■□□□□ 0.42
SIRPA-202ENST00000358771 E9PCH4 1651 aa17.65■□□□□ 0.42
SIRPA-202ENST00000358771 C8orf58Q8NAV2 365 aa17.64■□□□□ 0.42
SIRPA-202ENST00000358771 PPP6R1Q9UPN7 881 aa17.64■□□□□ 0.42
SIRPA-202ENST00000358771 SBNO2Q9Y2G9 1366 aa17.64■□□□□ 0.41
SIRPA-202ENST00000358771 ABCC11Q96J66 1382 aa17.64■□□□□ 0.41
SIRPA-202ENST00000358771 CLASP1Q7Z460 1538 aa17.64■□□□□ 0.41
SIRPA-202ENST00000358771 C1orf141Q5JVX7 400 aa17.64■□□□□ 0.41
SIRPA-202ENST00000358771 MLH3Q9UHC1 1453 aa17.64■□□□□ 0.41
SIRPA-202ENST00000358771 IFT57Q9NWB7 429 aa17.64■□□□□ 0.41
SIRPA-202ENST00000358771 GAS2L2Q8NHY3 880 aa17.63■□□□□ 0.41
SIRPA-202ENST00000358771 KDM5AP29375 1690 aaKnown RBP17.63■□□□□ 0.41
SIRPA-202ENST00000358771 TAOK2Q9UL54 1235 aa17.62■□□□□ 0.41
SIRPA-202ENST00000358771 FOXD4L6Q3SYB3 417 aaPredicted RBP17.62■□□□□ 0.41
SIRPA-202ENST00000358771 FOXD4L3Q6VB84 417 aaPredicted RBP17.62■□□□□ 0.41
SIRPA-202ENST00000358771 TRIM44Q96DX7 344 aaPredicted RBP17.62■□□□□ 0.41
SIRPA-202ENST00000358771 TET3O43151 1660 aa17.62■□□□□ 0.41
SIRPA-202ENST00000358771 CFAP44Q96MT7 982 aa17.62■□□□□ 0.41
SIRPA-202ENST00000358771 TTC21BQ7Z4L5 1316 aa17.61■□□□□ 0.41
SIRPA-202ENST00000358771 NEO1Q92859 1461 aa17.61■□□□□ 0.41
SIRPA-202ENST00000358771 RSPH6AQ9H0K4 717 aa17.61■□□□□ 0.41
SIRPA-202ENST00000358771 MYOM2P54296 1465 aa17.61■□□□□ 0.41
SIRPA-202ENST00000358771 ALDH1L2Q3SY69 923 aa17.61■□□□□ 0.41
SIRPA-202ENST00000358771 MCCP23508 829 aa17.61■□□□□ 0.41
SIRPA-202ENST00000358771 EIF4A2Q14240 407 aaKnown RBP17.61■□□□□ 0.41
SIRPA-202ENST00000358771 TRMT2AQ8IZ69 625 aaKnown RBP17.61■□□□□ 0.41
SIRPA-202ENST00000358771 CCDC9Q9Y3X0 531 aaKnown RBP17.61■□□□□ 0.41
SIRPA-202ENST00000358771 EFCAB6Q5THR3 1501 aa17.61■□□□□ 0.41
SIRPA-202ENST00000358771 FOXO3O43524 673 aa17.6■□□□□ 0.41
SIRPA-202ENST00000358771 AIMP1Q12904 312 aaKnown RBP17.6■□□□□ 0.41
SIRPA-202ENST00000358771 GBP4Q96PP9 640 aa17.6■□□□□ 0.41
SIRPA-202ENST00000358771 SMARCA5O60264 1052 aaPredicted RBP17.6■□□□□ 0.41
SIRPA-202ENST00000358771 GCC1Q96CN9 775 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms