RNA–Protein interactions for RNA: ENST00000358580.9

APBB3-204, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 5 BASIC

Gene APBB3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-204ENST00000358580 PANK1Q8TE04 598 aa28.53■■■□□ 2.16
APBB3-204ENST00000358580 COG6Q9Y2V7 657 aa28.53■■■□□ 2.16
APBB3-204ENST00000358580 MAPK8IP3Q9UPT6 1336 aa28.52■■■□□ 2.16
APBB3-204ENST00000358580 U2SURPO15042 1029 aaKnown RBP28.52■■■□□ 2.16
APBB3-204ENST00000358580 DIAPH1O60610 1272 aaKnown RBP28.52■■■□□ 2.16
APBB3-204ENST00000358580 SIRT1Q96EB6 747 aa28.52■■■□□ 2.16
APBB3-204ENST00000358580 SENP3Q9H4L4 574 aaPredicted RBP28.52■■■□□ 2.16
APBB3-204ENST00000358580 FRAT1Q92837 279 aaPredicted RBP28.51■■■□□ 2.15
APBB3-204ENST00000358580 NRXN3Q9Y4C0 1643 aa28.5■■■□□ 2.15
APBB3-204ENST00000358580 C8orf34Q49A92 452 aa28.5■■■□□ 2.15
APBB3-204ENST00000358580 PMFBP1Q8TBY8 1022 aa28.5■■■□□ 2.15
APBB3-204ENST00000358580 IGHDP01880 384 aa28.5■■■□□ 2.15
APBB3-204ENST00000358580 HDGFP51858 240 aaKnown RBP28.5■■■□□ 2.15
APBB3-204ENST00000358580 ZMYM3Q14202 1370 aa28.47■■■□□ 2.15
APBB3-204ENST00000358580 TRIM35Q9UPQ4 493 aa28.47■■■□□ 2.15
APBB3-204ENST00000358580 FAM135BQ49AJ0 1406 aa28.47■■■□□ 2.15
APBB3-204ENST00000358580 KNDC1Q76NI1 1749 aa28.47■■■□□ 2.15
APBB3-204ENST00000358580 CPSF1Q10570 1443 aaKnown RBP28.46■■■□□ 2.15
APBB3-204ENST00000358580 WAPLQ7Z5K2 1190 aa28.46■■■□□ 2.15
APBB3-204ENST00000358580 TECPR2O15040 1411 aa28.46■■■□□ 2.15
APBB3-204ENST00000358580 FCHSD2O94868 740 aa28.45■■■□□ 2.15
APBB3-204ENST00000358580 ESF1Q9H501 851 aaKnown RBP28.45■■■□□ 2.15
APBB3-204ENST00000358580 EDC4Q6P2E9 1401 aaKnown RBP28.44■■■□□ 2.14
APBB3-204ENST00000358580 WASLO00401 505 aaPredicted RBP28.43■■■□□ 2.14
APBB3-204ENST00000358580 MLECQ14165 292 aa28.43■■■□□ 2.14
APBB3-204ENST00000358580 KIF13AQ9H1H9 1805 aa28.43■■■□□ 2.14
APBB3-204ENST00000358580 RGS3P49796 1198 aa28.43■■■□□ 2.14
APBB3-204ENST00000358580 ZKSCAN2Q63HK3 967 aa28.43■■■□□ 2.14
APBB3-204ENST00000358580 RLBP1P12271 317 aa28.41■■■□□ 2.14
APBB3-204ENST00000358580 METP08581 1390 aa28.4■■■□□ 2.14
APBB3-204ENST00000358580 POLKQ9UBT6 870 aa28.4■■■□□ 2.14
APBB3-204ENST00000358580 RIPK4P57078 832 aa28.39■■■□□ 2.14
APBB3-204ENST00000358580 MVPQ14764 893 aaKnown RBP28.39■■■□□ 2.14
APBB3-204ENST00000358580 CPS1P31327 1500 aa28.39■■■□□ 2.14
APBB3-204ENST00000358580 PPIP5K1Q6PFW1 1433 aa28.38■■■□□ 2.13
APBB3-204ENST00000358580 NBR1Q14596 966 aa28.38■■■□□ 2.13
APBB3-204ENST00000358580 AATKQ6ZMQ8 1374 aa28.37■■■□□ 2.13
APBB3-204ENST00000358580 TNRQ92752 1358 aa28.37■■■□□ 2.13
APBB3-204ENST00000358580 EXOSC9Q06265 439 aaKnown RBP28.37■■■□□ 2.13
APBB3-204ENST00000358580 DZIP1LQ8IYY4 767 aaKnown RBP28.36■■■□□ 2.13
APBB3-204ENST00000358580 BCL2L13Q9BXK5 485 aa28.36■■■□□ 2.13
APBB3-204ENST00000358580 RWDD1Q9H446 243 aaPredicted RBP28.36■■■□□ 2.13
APBB3-204ENST00000358580 VIRMAQ69YN4 1812 aaKnown RBP28.36■■■□□ 2.13
APBB3-204ENST00000358580 PPM1GO15355 546 aaPredicted RBP28.36■■■□□ 2.13
APBB3-204ENST00000358580 TSR2Q969E8 191 aaKnown RBP28.36■■■□□ 2.13
APBB3-204ENST00000358580 LRRC7Q96NW7 1537 aa28.36■■■□□ 2.13
APBB3-204ENST00000358580 NEFMP07197 916 aa28.35■■■□□ 2.13
APBB3-204ENST00000358580 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.35■■■□□ 2.13
APBB3-204ENST00000358580 PCDHB15Q9Y5E8 787 aa28.35■■■□□ 2.13
APBB3-204ENST00000358580 RTL5Q5HYW3 569 aaPredicted RBP28.35■■■□□ 2.13
APBB3-204ENST00000358580 RSPH6AQ9H0K4 717 aa28.35■■■□□ 2.13
APBB3-204ENST00000358580 CDK12Q9NYV4 1490 aaPredicted RBP28.33■■■□□ 2.13
APBB3-204ENST00000358580 SMC4Q9NTJ3 1288 aa28.33■■■□□ 2.13
APBB3-204ENST00000358580 USP35Q9P2H5 1018 aa28.33■■■□□ 2.13
APBB3-204ENST00000358580 FTSJ3Q8IY81 847 aaKnown RBP28.33■■■□□ 2.13
APBB3-204ENST00000358580 CCDC61Q9Y6R9 512 aa28.33■■■□□ 2.13
APBB3-204ENST00000358580 TMEM2Q9UHN6 1383 aa28.32■■■□□ 2.12
APBB3-204ENST00000358580 ZNF428Q96B54 188 aa28.32■■■□□ 2.12
APBB3-204ENST00000358580 TNNQ9UQP3 1299 aa28.32■■■□□ 2.12
APBB3-204ENST00000358580 MON2Q7Z3U7 1717 aa28.32■■■□□ 2.12
APBB3-204ENST00000358580 NUDT16Q96DE0 195 aaKnown RBP28.31■■■□□ 2.12
APBB3-204ENST00000358580 ALDH1L2Q3SY69 923 aa28.3■■■□□ 2.12
APBB3-204ENST00000358580 UBR1Q8IWV7 1749 aa28.3■■■□□ 2.12
APBB3-204ENST00000358580 CALD1Q05682 793 aaKnown RBP28.3■■■□□ 2.12
APBB3-204ENST00000358580 TXNDC2Q86VQ3 553 aa28.3■■■□□ 2.12
APBB3-204ENST00000358580 SSH1Q8WYL5 1049 aa28.3■■■□□ 2.12
APBB3-204ENST00000358580 ZNF692Q9BU19 519 aaPredicted RBP28.3■■■□□ 2.12
APBB3-204ENST00000358580 MAP2P11137 1827 aaKnown RBP28.29■■■□□ 2.12
APBB3-204ENST00000358580 KIF16BQ96L93 1317 aa28.29■■■□□ 2.12
APBB3-204ENST00000358580 PRKAR2BP31323 418 aa28.28■■■□□ 2.12
APBB3-204ENST00000358580 ATF7IPQ6VMQ6 1270 aa28.28■■■□□ 2.12
APBB3-204ENST00000358580 DDX19BQ9UMR2 479 aa28.28■■■□□ 2.12
APBB3-204ENST00000358580 AKAP12Q02952 1782 aa28.27■■■□□ 2.12
APBB3-204ENST00000358580 IPO8O15397 1037 aaKnown RBP28.27■■■□□ 2.12
APBB3-204ENST00000358580 NFE2L2Q16236 605 aa28.27■■■□□ 2.12
APBB3-204ENST00000358580 TRIM27P14373 513 aa28.26■■■□□ 2.12
APBB3-204ENST00000358580 BRPF1P55201 1214 aaPredicted RBP28.26■■■□□ 2.12
APBB3-204ENST00000358580 IL13P35225 146 aa28.26■■■□□ 2.11
APBB3-204ENST00000358580 DAXXQ9UER7 740 aaPredicted RBP28.26■■■□□ 2.11
APBB3-204ENST00000358580 DEKP35659 375 aaKnown RBP28.25■■■□□ 2.11
APBB3-204ENST00000358580 COG3Q96JB2 828 aa28.25■■■□□ 2.11
APBB3-204ENST00000358580 C3P01024 1663 aa28.24■■■□□ 2.11
APBB3-204ENST00000358580 NME9Q86XW9 330 aa28.24■■■□□ 2.11
APBB3-204ENST00000358580 ITSN1Q15811 1721 aa28.23■■■□□ 2.11
APBB3-204ENST00000358580 HDAC1Q13547 482 aaPredicted RBP28.23■■■□□ 2.11
APBB3-204ENST00000358580 PDZRN3Q9UPQ7 1066 aa28.23■■■□□ 2.11
APBB3-204ENST00000358580 ADAMTS13Q76LX8 1427 aa28.22■■■□□ 2.11
APBB3-204ENST00000358580 PLEKHG1Q9ULL1 1385 aa28.22■■■□□ 2.11
APBB3-204ENST00000358580 NOB1Q9ULX3 412 aaKnown RBP28.21■■■□□ 2.11
APBB3-204ENST00000358580 EMILIN1Q9Y6C2 1016 aa28.21■■■□□ 2.11
APBB3-204ENST00000358580 LMOD3Q0VAK6 560 aa28.19■■■□□ 2.1
APBB3-204ENST00000358580 ROBO2Q9HCK4 1378 aa28.18■■■□□ 2.1
APBB3-204ENST00000358580 FBLN1P23142 703 aa28.18■■■□□ 2.1
APBB3-204ENST00000358580 IFT57Q9NWB7 429 aa28.18■■■□□ 2.1
APBB3-204ENST00000358580 LAS1LQ9Y4W2 734 aaKnown RBP28.18■■■□□ 2.1
APBB3-204ENST00000358580 USP19O94966 1318 aa28.17■■■□□ 2.1
APBB3-204ENST00000358580 GNAI1P63096 354 aa28.17■■■□□ 2.1
APBB3-204ENST00000358580 PHACTR3Q96KR7 559 aa28.17■■■□□ 2.1
APBB3-204ENST00000358580 ITPRIPQ8IWB1 547 aa28.16■■■□□ 2.1
APBB3-204ENST00000358580 PRR36Q9H6K5 1346 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms