RNA–Protein interactions for RNA: ENST00000357325.9

HDGF-201, Transcript of heparin binding growth factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGF, Length 2,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-201ENST00000357325 A2ML1A8K2U0 1454 aa32.14■■■□□ 2.74
HDGF-201ENST00000357325 HDGFL2Q7Z4V5 671 aaPredicted RBP32.13■■■□□ 2.73
HDGF-201ENST00000357325 EXOSC9Q06265 439 aaKnown RBP32.12■■■□□ 2.73
HDGF-201ENST00000357325 BCL11AQ9H165 835 aa32.11■■■□□ 2.73
HDGF-201ENST00000357325 ANKRD26Q9UPS8 1709 aa32.1■■■□□ 2.73
HDGF-201ENST00000357325 PPM1GO15355 546 aaPredicted RBP32.09■■■□□ 2.73
HDGF-201ENST00000357325 RIMS2Q9UQ26 1411 aa32.09■■■□□ 2.73
HDGF-201ENST00000357325 DIAPH1O60610 1272 aaKnown RBP32.08■■■□□ 2.73
HDGF-201ENST00000357325 RTL5Q5HYW3 569 aaPredicted RBP32.08■■■□□ 2.73
HDGF-201ENST00000357325 DDRGK1Q96HY6 314 aa32.08■■■□□ 2.73
HDGF-201ENST00000357325 MAPK8IP3Q9UPT6 1336 aa32.07■■■□□ 2.73
HDGF-201ENST00000357325 MED14O60244 1454 aa32.07■■■□□ 2.72
HDGF-201ENST00000357325 SEC24BO95487 1268 aa32.07■■■□□ 2.72
HDGF-201ENST00000357325 RIPK4P57078 832 aa32.07■■■□□ 2.72
HDGF-201ENST00000357325 NCBP3Q53F19 620 aaKnown RBP32.05■■■□□ 2.72
HDGF-201ENST00000357325 NCKAP5LQ9HCH0 1330 aa32.05■■■□□ 2.72
HDGF-201ENST00000357325 NEFMP07197 916 aa32.04■■■□□ 2.72
HDGF-201ENST00000357325 PNPLA6Q8IY17 1366 aa32.04■■■□□ 2.72
HDGF-201ENST00000357325 AGLP35573 1532 aa32.04■■■□□ 2.72
HDGF-201ENST00000357325 SPATA31D1Q6ZQQ2 1576 aa32.03■■■□□ 2.72
HDGF-201ENST00000357325 SETD1AO15047 1707 aaKnown RBP32.03■■■□□ 2.72
HDGF-201ENST00000357325 SSH1Q8WYL5 1049 aa32.03■■■□□ 2.72
HDGF-201ENST00000357325 POLKQ9UBT6 870 aa32.03■■■□□ 2.72
HDGF-201ENST00000357325 ZRANB1Q9UGI0 708 aa32.03■■■□□ 2.72
HDGF-201ENST00000357325 SMC4Q9NTJ3 1288 aa32.02■■■□□ 2.72
HDGF-201ENST00000357325 KIF20BQ96Q89 1820 aa32.01■■■□□ 2.72
HDGF-201ENST00000357325 METP08581 1390 aa32.01■■■□□ 2.72
HDGF-201ENST00000357325 USP19O94966 1318 aa32.01■■■□□ 2.71
HDGF-201ENST00000357325 REREQ9P2R6 1566 aa32.01■■■□□ 2.71
HDGF-201ENST00000357325 MVPQ14764 893 aaKnown RBP32.01■■■□□ 2.71
HDGF-201ENST00000357325 ZKSCAN2Q63HK3 967 aa32.01■■■□□ 2.71
HDGF-201ENST00000357325 TXNDC2Q86VQ3 553 aa32■■■□□ 2.71
HDGF-201ENST00000357325 DZIP1LQ8IYY4 767 aaKnown RBP31.99■■■□□ 2.71
HDGF-201ENST00000357325 PDZRN3Q9UPQ7 1066 aa31.99■■■□□ 2.71
HDGF-201ENST00000357325 TRIM27P14373 513 aa31.98■■■□□ 2.71
HDGF-201ENST00000357325 PMFBP1Q8TBY8 1022 aa31.98■■■□□ 2.71
HDGF-201ENST00000357325 PPP6R1Q9UPN7 881 aa31.97■■■□□ 2.71
HDGF-201ENST00000357325 FTSJ3Q8IY81 847 aaKnown RBP31.97■■■□□ 2.71
HDGF-201ENST00000357325 EMILIN1Q9Y6C2 1016 aa31.97■■■□□ 2.71
HDGF-201ENST00000357325 HMOX1P09601 288 aa31.96■■■□□ 2.71
HDGF-201ENST00000357325 PRKAR2BP31323 418 aa31.96■■■□□ 2.71
HDGF-201ENST00000357325 NME9Q86XW9 330 aa31.96■■■□□ 2.71
HDGF-201ENST00000357325 NRXN3Q9Y4C0 1643 aa31.96■■■□□ 2.71
HDGF-201ENST00000357325 LRRC7Q96NW7 1537 aa31.95■■■□□ 2.71
HDGF-201ENST00000357325 DLC1Q96QB1 1528 aa31.95■■■□□ 2.71
HDGF-201ENST00000357325 PHACTR3Q96KR7 559 aa31.95■■■□□ 2.7
HDGF-201ENST00000357325 RSPH6AQ9H0K4 717 aa31.94■■■□□ 2.7
HDGF-201ENST00000357325 NOB1Q9ULX3 412 aaKnown RBP31.94■■■□□ 2.7
HDGF-201ENST00000357325 WASLO00401 505 aaPredicted RBP31.93■■■□□ 2.7
HDGF-201ENST00000357325 THUMPD2Q9BTF0 503 aaKnown RBP31.93■■■□□ 2.7
HDGF-201ENST00000357325 VIRMAQ69YN4 1812 aaKnown RBP31.91■■■□□ 2.7
HDGF-201ENST00000357325 PPIP5K1Q6PFW1 1433 aa31.91■■■□□ 2.7
HDGF-201ENST00000357325 ATP7BP35670 1465 aa31.91■■■□□ 2.7
HDGF-201ENST00000357325 ZMYM3Q14202 1370 aa31.9■■■□□ 2.7
HDGF-201ENST00000357325 FCHSD2O94868 740 aa31.9■■■□□ 2.7
HDGF-201ENST00000357325 MAP2P11137 1827 aaKnown RBP31.89■■■□□ 2.7
HDGF-201ENST00000357325 CT47B1P0C2W7 299 aaPredicted RBP31.89■■■□□ 2.7
HDGF-201ENST00000357325 IL16Q14005 1332 aa31.88■■■□□ 2.69
HDGF-201ENST00000357325 ITPRIPQ8IWB1 547 aa31.88■■■□□ 2.69
HDGF-201ENST00000357325 RWDD1Q9H446 243 aaPredicted RBP31.88■■■□□ 2.69
HDGF-201ENST00000357325 AAMPQ13685 434 aa31.88■■■□□ 2.69
HDGF-201ENST00000357325 ATF7IPQ6VMQ6 1270 aa31.88■■■□□ 2.69
HDGF-201ENST00000357325 DAXXQ9UER7 740 aaPredicted RBP31.88■■■□□ 2.69
HDGF-201ENST00000357325 CPSF1Q10570 1443 aaKnown RBP31.87■■■□□ 2.69
HDGF-201ENST00000357325 FAM135BQ49AJ0 1406 aa31.87■■■□□ 2.69
HDGF-201ENST00000357325 NUDT16Q96DE0 195 aaKnown RBP31.86■■■□□ 2.69
HDGF-201ENST00000357325 TMEM57Q8N5G2 664 aa31.86■■■□□ 2.69
HDGF-201ENST00000357325 RRS1Q15050 365 aaKnown RBP31.85■■■□□ 2.69
HDGF-201ENST00000357325 CPS1P31327 1500 aa31.84■■■□□ 2.69
HDGF-201ENST00000357325 CDC42BPGQ6DT37 1551 aa31.83■■■□□ 2.69
HDGF-201ENST00000357325 ESF1Q9H501 851 aaKnown RBP31.82■■■□□ 2.69
HDGF-201ENST00000357325 IL13P35225 146 aa31.82■■■□□ 2.68
HDGF-201ENST00000357325 NFKBIBQ15653 356 aa31.82■■■□□ 2.68
HDGF-201ENST00000357325 PNNQ9H307 717 aaKnown RBP31.81■■■□□ 2.68
HDGF-201ENST00000357325 EDC4Q6P2E9 1401 aaKnown RBP31.8■■■□□ 2.68
HDGF-201ENST00000357325 PRR36Q9H6K5 1346 aa31.8■■■□□ 2.68
HDGF-201ENST00000357325 USP35Q9P2H5 1018 aa31.79■■■□□ 2.68
HDGF-201ENST00000357325 TSPYL6Q8N831 410 aa31.78■■■□□ 2.68
HDGF-201ENST00000357325 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.78■■■□□ 2.68
HDGF-201ENST00000357325 NFE2L2Q16236 605 aa31.78■■■□□ 2.68
HDGF-201ENST00000357325 DDX19BQ9UMR2 479 aa31.77■■■□□ 2.68
HDGF-201ENST00000357325 NUTM2FA1L443 756 aa31.76■■■□□ 2.68
HDGF-201ENST00000357325 ELL2O00472 640 aaPredicted RBP31.76■■■□□ 2.67
HDGF-201ENST00000357325 CCDC61Q9Y6R9 512 aa31.76■■■□□ 2.67
HDGF-201ENST00000357325 KIF13AQ9H1H9 1805 aa31.75■■■□□ 2.67
HDGF-201ENST00000357325 ZBTB40Q9NUA8 1239 aa31.74■■■□□ 2.67
HDGF-201ENST00000357325 ROBO2Q9HCK4 1378 aa31.73■■■□□ 2.67
HDGF-201ENST00000357325 FAM83GA6ND36 823 aa31.73■■■□□ 2.67
HDGF-201ENST00000357325 COG3Q96JB2 828 aa31.73■■■□□ 2.67
HDGF-201ENST00000357325 TNRQ92752 1358 aa31.71■■■□□ 2.67
HDGF-201ENST00000357325 HDAC1Q13547 482 aaPredicted RBP31.71■■■□□ 2.67
HDGF-201ENST00000357325 KIF16BQ96L93 1317 aa31.7■■■□□ 2.67
HDGF-201ENST00000357325 VAMP4O75379 141 aa31.7■■■□□ 2.67
HDGF-201ENST00000357325 DCTN1Q14203 1278 aa31.7■■■□□ 2.66
HDGF-201ENST00000357325 ALDH1L2Q3SY69 923 aa31.69■■■□□ 2.66
HDGF-201ENST00000357325 MBIPQ9NS73 344 aa31.69■■■□□ 2.66
HDGF-201ENST00000357325 CDK12Q9NYV4 1490 aaPredicted RBP31.69■■■□□ 2.66
HDGF-201ENST00000357325 TMEM2Q9UHN6 1383 aa31.68■■■□□ 2.66
HDGF-201ENST00000357325 TECPR2O15040 1411 aa31.67■■■□□ 2.66
HDGF-201ENST00000357325 LTKP29376 864 aa31.67■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 180.5 ms