RNA–Protein interactions for RNA: ENST00000348286.6

DNMT3B-203, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,048 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-203ENST00000348286 GOLGA6L4A6NEF3 574 aa16.16■□□□□ 0.18
DNMT3B-203ENST00000348286 NINLQ9Y2I6 1382 aa16.16■□□□□ 0.18
DNMT3B-203ENST00000348286 CCDC9Q9Y3X0 531 aaKnown RBP16.16■□□□□ 0.18
DNMT3B-203ENST00000348286 CHMP3Q9Y3E7 222 aa16.15■□□□□ 0.18
DNMT3B-203ENST00000348286 ASXL2Q76L83 1435 aa16.15■□□□□ 0.18
DNMT3B-203ENST00000348286 GLIPR1L2Q4G1C9 344 aa16.15■□□□□ 0.18
DNMT3B-203ENST00000348286 ABCC10Q5T3U5 1492 aa16.15■□□□□ 0.18
DNMT3B-203ENST00000348286 CDC45O75419 566 aa16.15■□□□□ 0.18
DNMT3B-203ENST00000348286 MCM10Q7L590 875 aa16.15■□□□□ 0.18
DNMT3B-203ENST00000348286 REC8O95072 547 aa16.14■□□□□ 0.17
DNMT3B-203ENST00000348286 ZNF428Q96B54 188 aa16.14■□□□□ 0.17
DNMT3B-203ENST00000348286 PSME1Q06323 249 aa16.14■□□□□ 0.17
DNMT3B-203ENST00000348286 TRAK2O60296 914 aa16.13■□□□□ 0.17
DNMT3B-203ENST00000348286 C8orf34Q49A92 452 aa16.13■□□□□ 0.17
DNMT3B-203ENST00000348286 INTS3Q68E01 1043 aaKnown RBP16.13■□□□□ 0.17
DNMT3B-203ENST00000348286 ABTB2Q8N961 1025 aa16.13■□□□□ 0.17
DNMT3B-203ENST00000348286 FAM83GA6ND36 823 aa16.12■□□□□ 0.17
DNMT3B-203ENST00000348286 GCC1Q96CN9 775 aa16.12■□□□□ 0.17
DNMT3B-203ENST00000348286 ZNF692Q9BU19 519 aaPredicted RBP16.12■□□□□ 0.17
DNMT3B-203ENST00000348286 PTMSP20962 102 aa16.11■□□□□ 0.17
DNMT3B-203ENST00000348286 C9orf78Q9NZ63 289 aaPredicted RBP16.11■□□□□ 0.17
DNMT3B-203ENST00000348286 SEC24BO95487 1268 aa16.1■□□□□ 0.17
DNMT3B-203ENST00000348286 C1orf141Q5JVX7 400 aa16.1■□□□□ 0.17
DNMT3B-203ENST00000348286 ZRANB1Q9UGI0 708 aa16.1■□□□□ 0.17
DNMT3B-203ENST00000348286 TBC1D2Q9BYX2 928 aa16.1■□□□□ 0.17
DNMT3B-203ENST00000348286 MCTP1Q6DN14 999 aa16.09■□□□□ 0.17
DNMT3B-203ENST00000348286 CHMP4AQ9BY43 222 aa16.09■□□□□ 0.17
DNMT3B-203ENST00000348286 PRKCSHP14314 528 aaPredicted RBP16.09■□□□□ 0.17
DNMT3B-203ENST00000348286 ZRSR1Q15695 479 aaKnown RBP16.08■□□□□ 0.17
DNMT3B-203ENST00000348286 CFAP65Q6ZU64 1925 aaKnown RBP16.08■□□□□ 0.16
DNMT3B-203ENST00000348286 WASLO00401 505 aaPredicted RBP16.08■□□□□ 0.16
DNMT3B-203ENST00000348286 POLR3AO14802 1390 aaPredicted RBP16.08■□□□□ 0.16
DNMT3B-203ENST00000348286 WDR7Q9Y4E6 1490 aa16.08■□□□□ 0.16
DNMT3B-203ENST00000348286 CEBPAP49715 358 aaPredicted RBP16.08■□□□□ 0.16
DNMT3B-203ENST00000348286 ABCC2Q92887 1545 aa16.07■□□□□ 0.16
DNMT3B-203ENST00000348286 PIK3C2GO75747 1445 aa16.07■□□□□ 0.16
DNMT3B-203ENST00000348286 AIMP1Q12904 312 aaKnown RBP16.07■□□□□ 0.16
DNMT3B-203ENST00000348286 SURF6O75683 361 aaKnown RBP16.07■□□□□ 0.16
DNMT3B-203ENST00000348286 UBTFL1P0CB47 393 aaPredicted RBP16.07■□□□□ 0.16
DNMT3B-203ENST00000348286 GPATCH3Q96I76 525 aa16.07■□□□□ 0.16
DNMT3B-203ENST00000348286 SMARCA5O60264 1052 aaPredicted RBP16.06■□□□□ 0.16
DNMT3B-203ENST00000348286 SKOR2Q2VWA4 1001 aaPredicted RBP16.06■□□□□ 0.16
DNMT3B-203ENST00000348286 RBM33Q96EV2 1170 aaKnown RBP16.06■□□□□ 0.16
DNMT3B-203ENST00000348286 MCM4P33991 863 aa16.06■□□□□ 0.16
DNMT3B-203ENST00000348286 NEK4P51957 841 aa16.06■□□□□ 0.16
DNMT3B-203ENST00000348286 GAS2L2Q8NHY3 880 aa16.05■□□□□ 0.16
DNMT3B-203ENST00000348286 DIAPH3Q9NSV4 1193 aa16.05■□□□□ 0.16
DNMT3B-203ENST00000348286 ANKRD36BQ8N2N9 1353 aa16.05■□□□□ 0.16
DNMT3B-203ENST00000348286 F6X3S4 739 aa16.05■□□□□ 0.16
DNMT3B-203ENST00000348286 NCKAP5LQ9HCH0 1330 aa16.05■□□□□ 0.16
DNMT3B-203ENST00000348286 MAGI2Q86UL8 1455 aa16.05■□□□□ 0.16
DNMT3B-203ENST00000348286 KDM5CP41229 1560 aa16.05■□□□□ 0.16
DNMT3B-203ENST00000348286 ARID3AQ99856 593 aa16.04■□□□□ 0.16
DNMT3B-203ENST00000348286 EXOC6BQ9Y2D4 811 aa16.04■□□□□ 0.16
DNMT3B-203ENST00000348286 ALDH1L2Q3SY69 923 aa16.04■□□□□ 0.16
DNMT3B-203ENST00000348286 HDGFL1Q5TGJ6 251 aa16.04■□□□□ 0.16
DNMT3B-203ENST00000348286 CCDC30Q5VVM6 783 aa16.04■□□□□ 0.16
DNMT3B-203ENST00000348286 PLA2R1Q13018 1463 aa16.04■□□□□ 0.16
DNMT3B-203ENST00000348286 MBIPQ9NS73 344 aa16.03■□□□□ 0.16
DNMT3B-203ENST00000348286 HDAC5Q9UQL6 1122 aa16.03■□□□□ 0.16
DNMT3B-203ENST00000348286 ABCC11Q96J66 1382 aa16.03■□□□□ 0.16
DNMT3B-203ENST00000348286 ESCO1Q5FWF5 840 aa16.03■□□□□ 0.16
DNMT3B-203ENST00000348286 PHACTR3Q96KR7 559 aa16.03■□□□□ 0.16
DNMT3B-203ENST00000348286 ABCA8O94911 1581 aa16.03■□□□□ 0.16
DNMT3B-203ENST00000348286 GNAI2P04899 355 aa16.03■□□□□ 0.16
DNMT3B-203ENST00000348286 POLKQ9UBT6 870 aa16.03■□□□□ 0.16
DNMT3B-203ENST00000348286 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.03■□□□□ 0.16
DNMT3B-203ENST00000348286 GNAI3P08754 354 aa16.03■□□□□ 0.16
DNMT3B-203ENST00000348286 SYAP1Q96A49 352 aaPredicted RBP16.03■□□□□ 0.16
DNMT3B-203ENST00000348286 IFT57Q9NWB7 429 aa16.02■□□□□ 0.16
DNMT3B-203ENST00000348286 EIF2AK4Q9P2K8 1649 aaKnown RBP16.02■□□□□ 0.16
DNMT3B-203ENST00000348286 NUCB2P80303 420 aa16.02■□□□□ 0.15
DNMT3B-203ENST00000348286 TSPYL6Q8N831 410 aa16.02■□□□□ 0.15
DNMT3B-203ENST00000348286 IFIT2P09913 472 aaKnown RBP16.02■□□□□ 0.15
DNMT3B-203ENST00000348286 IL1RAPL2Q9NP60 686 aa16.02■□□□□ 0.15
DNMT3B-203ENST00000348286 TBC1D32Q96NH3 1257 aa16.01■□□□□ 0.15
DNMT3B-203ENST00000348286 KDM2BQ8NHM5 1336 aa16.01■□□□□ 0.15
DNMT3B-203ENST00000348286 GORABQ5T7V8 394 aa16.01■□□□□ 0.15
DNMT3B-203ENST00000348286 ADGBQ8N7X0 1667 aa16.01■□□□□ 0.15
DNMT3B-203ENST00000348286 XPCQ01831 940 aaPredicted RBP16.01■□□□□ 0.15
DNMT3B-203ENST00000348286 DRC7Q8IY82 874 aa16.01■□□□□ 0.15
DNMT3B-203ENST00000348286 CCDC27Q2M243 656 aa16■□□□□ 0.15
DNMT3B-203ENST00000348286 AEBP1Q8IUX7 1158 aa16■□□□□ 0.15
DNMT3B-203ENST00000348286 NSD2O96028 1365 aa16■□□□□ 0.15
DNMT3B-203ENST00000348286 ZNF518AQ6AHZ1 1483 aa16■□□□□ 0.15
DNMT3B-203ENST00000348286 SAMD9LQ8IVG5 1584 aa16■□□□□ 0.15
DNMT3B-203ENST00000348286 MAP4K4O95819 1239 aaPredicted RBP16■□□□□ 0.15
DNMT3B-203ENST00000348286 HSP90B1P14625 803 aaKnown RBP16■□□□□ 0.15
DNMT3B-203ENST00000348286 HSP90AB2PQ58FF8 381 aa16■□□□□ 0.15
DNMT3B-203ENST00000348286 A0A1W2PP64 1363 aa16■□□□□ 0.15
DNMT3B-203ENST00000348286 K7ELQ4 463 aaPredicted RBP16■□□□□ 0.15
DNMT3B-203ENST00000348286 NLRP2Q9NX02 1062 aa16■□□□□ 0.15
DNMT3B-203ENST00000348286 BLMP54132 1417 aaPredicted RBP15.99■□□□□ 0.15
DNMT3B-203ENST00000348286 C8orf58Q8NAV2 365 aa15.99■□□□□ 0.15
DNMT3B-203ENST00000348286 KRT24Q2M2I5 525 aa15.99■□□□□ 0.15
DNMT3B-203ENST00000348286 CAVIN1Q6NZI2 390 aaKnown RBP15.99■□□□□ 0.15
DNMT3B-203ENST00000348286 USHBP1Q8N6Y0 703 aa15.99■□□□□ 0.15
DNMT3B-203ENST00000348286 RABEP1Q15276 862 aa15.99■□□□□ 0.15
DNMT3B-203ENST00000348286 NEXNQ0ZGT2 675 aa15.98■□□□□ 0.15
DNMT3B-203ENST00000348286 MAST1Q9Y2H9 1570 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms