RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 FBXO31Q5XUX0 539 aaPredicted RBP18.68■□□□□ 0.58
ARHGEF1-202ENST00000347545 MYH16Q9H6N6 1097 aa18.68■□□□□ 0.58
ARHGEF1-202ENST00000347545 ATAD2Q6PL18 1390 aa18.67■□□□□ 0.58
ARHGEF1-202ENST00000347545 RIMBP3CA6NJZ7 1639 aa18.66■□□□□ 0.58
ARHGEF1-202ENST00000347545 RIMBP3BA6NNM3 1639 aa18.66■□□□□ 0.58
ARHGEF1-202ENST00000347545 RIMBP3Q9UFD9 1639 aa18.66■□□□□ 0.58
ARHGEF1-202ENST00000347545 TMPOP42166 694 aaKnown RBP18.65■□□□□ 0.58
ARHGEF1-202ENST00000347545 AAMPQ13685 434 aa18.65■□□□□ 0.58
ARHGEF1-202ENST00000347545 PMFBP1Q8TBY8 1022 aa18.65■□□□□ 0.58
ARHGEF1-202ENST00000347545 CDC42BPGQ6DT37 1551 aa18.65■□□□□ 0.58
ARHGEF1-202ENST00000347545 U2SURPO15042 1029 aaKnown RBP18.65■□□□□ 0.58
ARHGEF1-202ENST00000347545 MVPQ14764 893 aaKnown RBP18.64■□□□□ 0.57
ARHGEF1-202ENST00000347545 PDZRN3Q9UPQ7 1066 aa18.64■□□□□ 0.57
ARHGEF1-202ENST00000347545 LRRC7Q96NW7 1537 aa18.63■□□□□ 0.57
ARHGEF1-202ENST00000347545 PNPLA6Q8IY17 1366 aa18.63■□□□□ 0.57
ARHGEF1-202ENST00000347545 EXOSC9Q06265 439 aaKnown RBP18.63■□□□□ 0.57
ARHGEF1-202ENST00000347545 TERF2IPQ9NYB0 399 aa18.61■□□□□ 0.57
ARHGEF1-202ENST00000347545 MAP2P11137 1827 aaKnown RBP18.61■□□□□ 0.57
ARHGEF1-202ENST00000347545 ZMYM3Q14202 1370 aa18.61■□□□□ 0.57
ARHGEF1-202ENST00000347545 ZKSCAN2Q63HK3 967 aa18.61■□□□□ 0.57
ARHGEF1-202ENST00000347545 CDK19Q9BWU1 502 aa18.61■□□□□ 0.57
ARHGEF1-202ENST00000347545 POGKQ9P215 609 aa18.61■□□□□ 0.57
ARHGEF1-202ENST00000347545 DAXXQ9UER7 740 aaPredicted RBP18.61■□□□□ 0.57
ARHGEF1-202ENST00000347545 TSPOAP1O95153 1857 aa18.6■□□□□ 0.57
ARHGEF1-202ENST00000347545 DZIP1LQ8IYY4 767 aaKnown RBP18.6■□□□□ 0.57
ARHGEF1-202ENST00000347545 SSH1Q8WYL5 1049 aa18.6■□□□□ 0.57
ARHGEF1-202ENST00000347545 CT47B1P0C2W7 299 aaPredicted RBP18.59■□□□□ 0.57
ARHGEF1-202ENST00000347545 TRIM27P14373 513 aa18.59■□□□□ 0.57
ARHGEF1-202ENST00000347545 DLC1Q96QB1 1528 aa18.59■□□□□ 0.57
ARHGEF1-202ENST00000347545 NRXN3Q9Y4C0 1643 aa18.59■□□□□ 0.57
ARHGEF1-202ENST00000347545 CABP1Q9NZU7 370 aa18.59■□□□□ 0.57
ARHGEF1-202ENST00000347545 REREQ9P2R6 1566 aa18.59■□□□□ 0.57
ARHGEF1-202ENST00000347545 DIP2BQ9P265 1576 aa18.58■□□□□ 0.57
ARHGEF1-202ENST00000347545 A2ML1A8K2U0 1454 aa18.58■□□□□ 0.56
ARHGEF1-202ENST00000347545 SMC4Q9NTJ3 1288 aa18.58■□□□□ 0.56
ARHGEF1-202ENST00000347545 RWDD1Q9H446 243 aaPredicted RBP18.58■□□□□ 0.56
ARHGEF1-202ENST00000347545 IL16Q14005 1332 aa18.57■□□□□ 0.56
ARHGEF1-202ENST00000347545 SPATA31D1Q6ZQQ2 1576 aa18.57■□□□□ 0.56
ARHGEF1-202ENST00000347545 FBLN1P23142 703 aa18.57■□□□□ 0.56
ARHGEF1-202ENST00000347545 FRAT2O75474 233 aaPredicted RBP18.56■□□□□ 0.56
ARHGEF1-202ENST00000347545 DIAPH1O60610 1272 aaKnown RBP18.56■□□□□ 0.56
ARHGEF1-202ENST00000347545 FAM135BQ49AJ0 1406 aa18.56■□□□□ 0.56
ARHGEF1-202ENST00000347545 RIPK4P57078 832 aa18.55■□□□□ 0.56
ARHGEF1-202ENST00000347545 ATP7BP35670 1465 aa18.55■□□□□ 0.56
ARHGEF1-202ENST00000347545 HDGFL2Q7Z4V5 671 aaPredicted RBP18.55■□□□□ 0.56
ARHGEF1-202ENST00000347545 FTSJ3Q8IY81 847 aaKnown RBP18.55■□□□□ 0.56
ARHGEF1-202ENST00000347545 AGLP35573 1532 aa18.55■□□□□ 0.56
ARHGEF1-202ENST00000347545 WAPLQ7Z5K2 1190 aa18.54■□□□□ 0.56
ARHGEF1-202ENST00000347545 NOB1Q9ULX3 412 aaKnown RBP18.54■□□□□ 0.56
ARHGEF1-202ENST00000347545 GSE1Q14687 1217 aa18.53■□□□□ 0.56
ARHGEF1-202ENST00000347545 ATF7IPQ6VMQ6 1270 aa18.53■□□□□ 0.56
ARHGEF1-202ENST00000347545 TBC1D32Q96NH3 1257 aa18.53■□□□□ 0.56
ARHGEF1-202ENST00000347545 DLG5Q8TDM6 1919 aa18.53■□□□□ 0.56
ARHGEF1-202ENST00000347545 POLKQ9UBT6 870 aa18.53■□□□□ 0.56
ARHGEF1-202ENST00000347545 RSPH6AQ9H0K4 717 aa18.52■□□□□ 0.56
ARHGEF1-202ENST00000347545 RIMS2Q9UQ26 1411 aa18.52■□□□□ 0.55
ARHGEF1-202ENST00000347545 HDAC1Q13547 482 aaPredicted RBP18.51■□□□□ 0.55
ARHGEF1-202ENST00000347545 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.51■□□□□ 0.55
ARHGEF1-202ENST00000347545 TMEM57Q8N5G2 664 aa18.51■□□□□ 0.55
ARHGEF1-202ENST00000347545 ITPRIPQ8IWB1 547 aa18.51■□□□□ 0.55
ARHGEF1-202ENST00000347545 MON2Q7Z3U7 1717 aa18.5■□□□□ 0.55
ARHGEF1-202ENST00000347545 CPSF1Q10570 1443 aaKnown RBP18.49■□□□□ 0.55
ARHGEF1-202ENST00000347545 FCHSD2O94868 740 aa18.49■□□□□ 0.55
ARHGEF1-202ENST00000347545 PRKAR2BP31323 418 aa18.49■□□□□ 0.55
ARHGEF1-202ENST00000347545 DDX19BQ9UMR2 479 aa18.49■□□□□ 0.55
ARHGEF1-202ENST00000347545 CYB5RLQ6IPT4 315 aa18.48■□□□□ 0.55
ARHGEF1-202ENST00000347545 ZBTB40Q9NUA8 1239 aa18.48■□□□□ 0.55
ARHGEF1-202ENST00000347545 PPIP5K1Q6PFW1 1433 aa18.48■□□□□ 0.55
ARHGEF1-202ENST00000347545 AKAP12Q02952 1782 aa18.48■□□□□ 0.55
ARHGEF1-202ENST00000347545 PHACTR3Q96KR7 559 aa18.48■□□□□ 0.55
ARHGEF1-202ENST00000347545 KNDC1Q76NI1 1749 aa18.48■□□□□ 0.55
ARHGEF1-202ENST00000347545 ANTXR1Q9H6X2 564 aa18.48■□□□□ 0.55
ARHGEF1-202ENST00000347545 STAG3Q9UJ98 1225 aa18.48■□□□□ 0.55
ARHGEF1-202ENST00000347545 FAM69CQ0P6D2 419 aa18.47■□□□□ 0.55
ARHGEF1-202ENST00000347545 CPS1P31327 1500 aa18.47■□□□□ 0.55
ARHGEF1-202ENST00000347545 SMC5Q8IY18 1101 aa18.46■□□□□ 0.55
ARHGEF1-202ENST00000347545 C3P01024 1663 aa18.46■□□□□ 0.55
ARHGEF1-202ENST00000347545 ZRANB1Q9UGI0 708 aa18.46■□□□□ 0.54
ARHGEF1-202ENST00000347545 TBC1D2Q9BYX2 928 aa18.45■□□□□ 0.54
ARHGEF1-202ENST00000347545 EMILIN1Q9Y6C2 1016 aa18.45■□□□□ 0.54
ARHGEF1-202ENST00000347545 METP08581 1390 aa18.45■□□□□ 0.54
ARHGEF1-202ENST00000347545 KIF16BQ96L93 1317 aa18.45■□□□□ 0.54
ARHGEF1-202ENST00000347545 CDK12Q9NYV4 1490 aaPredicted RBP18.45■□□□□ 0.54
ARHGEF1-202ENST00000347545 THUMPD2Q9BTF0 503 aaKnown RBP18.45■□□□□ 0.54
ARHGEF1-202ENST00000347545 EDC4Q6P2E9 1401 aaKnown RBP18.45■□□□□ 0.54
ARHGEF1-202ENST00000347545 ITSN1Q15811 1721 aa18.44■□□□□ 0.54
ARHGEF1-202ENST00000347545 HMOX1P09601 288 aa18.44■□□□□ 0.54
ARHGEF1-202ENST00000347545 BECN1Q14457 450 aa18.44■□□□□ 0.54
ARHGEF1-202ENST00000347545 ALDH1L2Q3SY69 923 aa18.44■□□□□ 0.54
ARHGEF1-202ENST00000347545 PNNQ9H307 717 aaKnown RBP18.44■□□□□ 0.54
ARHGEF1-202ENST00000347545 SLKQ9H2G2 1235 aaPredicted RBP18.44■□□□□ 0.54
ARHGEF1-202ENST00000347545 NME9Q86XW9 330 aa18.43■□□□□ 0.54
ARHGEF1-202ENST00000347545 IL13P35225 146 aa18.43■□□□□ 0.54
ARHGEF1-202ENST00000347545 NFE2L2Q16236 605 aa18.43■□□□□ 0.54
ARHGEF1-202ENST00000347545 NCKAP5LQ9HCH0 1330 aa18.43■□□□□ 0.54
ARHGEF1-202ENST00000347545 BRPF3Q9ULD4 1205 aa18.42■□□□□ 0.54
ARHGEF1-202ENST00000347545 PPP6R1Q9UPN7 881 aa18.42■□□□□ 0.54
ARHGEF1-202ENST00000347545 BRPF1P55201 1214 aaPredicted RBP18.41■□□□□ 0.54
ARHGEF1-202ENST00000347545 UPF2Q9HAU5 1272 aaKnown RBP18.41■□□□□ 0.54
ARHGEF1-202ENST00000347545 WASLO00401 505 aaPredicted RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms