RNA–Protein interactions for RNA: ENST00000345523.9

C19orf48-201, Transcript of chromosome 19 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C19orf48, Length 1,503 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-201ENST00000345523 DIAPH1O60610 1272 aaKnown RBP20.54■□□□□ 0.88
C19orf48-201ENST00000345523 ZNF428Q96B54 188 aa20.54■□□□□ 0.88
C19orf48-201ENST00000345523 FCHSD2O94868 740 aa20.53■□□□□ 0.88
C19orf48-201ENST00000345523 USP35Q9P2H5 1018 aa20.53■□□□□ 0.88
C19orf48-201ENST00000345523 DMRT2Q9Y5R5 561 aa20.53■□□□□ 0.88
C19orf48-201ENST00000345523 PPM1GO15355 546 aaPredicted RBP20.53■□□□□ 0.88
C19orf48-201ENST00000345523 CALD1Q05682 793 aaKnown RBP20.53■□□□□ 0.88
C19orf48-201ENST00000345523 SAFB2Q14151 953 aaKnown RBP eCLIP20.53■□□□□ 0.88
C19orf48-201ENST00000345523 PLEKHF1Q96S99 279 aa20.53■□□□□ 0.88
C19orf48-201ENST00000345523 CDC42BPGQ6DT37 1551 aa20.52■□□□□ 0.88
C19orf48-201ENST00000345523 ADAMTSL3P82987 1691 aa20.52■□□□□ 0.88
C19orf48-201ENST00000345523 MYO5BQ9ULV0 1848 aa20.51■□□□□ 0.87
C19orf48-201ENST00000345523 NEUROD2Q15784 382 aa20.51■□□□□ 0.87
C19orf48-201ENST00000345523 GGNBP2Q9H3C7 697 aa20.51■□□□□ 0.87
C19orf48-201ENST00000345523 TECPR2O15040 1411 aa20.5■□□□□ 0.87
C19orf48-201ENST00000345523 TMPOP42166 694 aaKnown RBP20.5■□□□□ 0.87
C19orf48-201ENST00000345523 RIMS1Q86UR5 1692 aaKnown RBP20.5■□□□□ 0.87
C19orf48-201ENST00000345523 RTL5Q5HYW3 569 aaPredicted RBP20.49■□□□□ 0.87
C19orf48-201ENST00000345523 ZKSCAN2Q63HK3 967 aa20.49■□□□□ 0.87
C19orf48-201ENST00000345523 RWDD1Q9H446 243 aaPredicted RBP20.49■□□□□ 0.87
C19orf48-201ENST00000345523 EDC4Q6P2E9 1401 aaKnown RBP20.49■□□□□ 0.87
C19orf48-201ENST00000345523 U2SURPO15042 1029 aaKnown RBP20.48■□□□□ 0.87
C19orf48-201ENST00000345523 CABP1Q9NZU7 370 aa20.48■□□□□ 0.87
C19orf48-201ENST00000345523 RRP7AQ9Y3A4 280 aaKnown RBP20.48■□□□□ 0.87
C19orf48-201ENST00000345523 PAK3O75914 559 aaPredicted RBP20.48■□□□□ 0.87
C19orf48-201ENST00000345523 AATKQ6ZMQ8 1374 aa20.47■□□□□ 0.87
C19orf48-201ENST00000345523 NPM2Q86SE8 214 aaKnown RBP20.47■□□□□ 0.87
C19orf48-201ENST00000345523 ZNF692Q9BU19 519 aaPredicted RBP20.47■□□□□ 0.87
C19orf48-201ENST00000345523 CHMP4BQ9H444 224 aaKnown RBP20.47■□□□□ 0.87
C19orf48-201ENST00000345523 DAXXQ9UER7 740 aaPredicted RBP20.47■□□□□ 0.87
C19orf48-201ENST00000345523 CPSF1Q10570 1443 aaKnown RBP20.46■□□□□ 0.87
C19orf48-201ENST00000345523 WASLO00401 505 aaPredicted RBP20.46■□□□□ 0.87
C19orf48-201ENST00000345523 IPO8O15397 1037 aaKnown RBP20.46■□□□□ 0.87
C19orf48-201ENST00000345523 FRAT1Q92837 279 aaPredicted RBP20.46■□□□□ 0.87
C19orf48-201ENST00000345523 TNRQ92752 1358 aa20.45■□□□□ 0.86
C19orf48-201ENST00000345523 COG6Q9Y2V7 657 aa20.45■□□□□ 0.86
C19orf48-201ENST00000345523 ALDH1L2Q3SY69 923 aa20.44■□□□□ 0.86
C19orf48-201ENST00000345523 KIF20BQ96Q89 1820 aa20.44■□□□□ 0.86
C19orf48-201ENST00000345523 SETD1AO15047 1707 aaKnown RBP20.44■□□□□ 0.86
C19orf48-201ENST00000345523 KIF16BQ96L93 1317 aa20.43■□□□□ 0.86
C19orf48-201ENST00000345523 MVPQ14764 893 aaKnown RBP20.43■□□□□ 0.86
C19orf48-201ENST00000345523 C8orf34Q49A92 452 aa20.43■□□□□ 0.86
C19orf48-201ENST00000345523 KNDC1Q76NI1 1749 aa20.43■□□□□ 0.86
C19orf48-201ENST00000345523 DZIP1LQ8IYY4 767 aaKnown RBP20.43■□□□□ 0.86
C19orf48-201ENST00000345523 PANK1Q8TE04 598 aa20.43■□□□□ 0.86
C19orf48-201ENST00000345523 BRPF1P55201 1214 aaPredicted RBP20.42■□□□□ 0.86
C19orf48-201ENST00000345523 LMOD3Q0VAK6 560 aa20.42■□□□□ 0.86
C19orf48-201ENST00000345523 FTSJ3Q8IY81 847 aaKnown RBP20.42■□□□□ 0.86
C19orf48-201ENST00000345523 DDX19BQ9UMR2 479 aa20.42■□□□□ 0.86
C19orf48-201ENST00000345523 TRIM35Q9UPQ4 493 aa20.42■□□□□ 0.86
C19orf48-201ENST00000345523 CCDC61Q9Y6R9 512 aa20.42■□□□□ 0.86
C19orf48-201ENST00000345523 RIPK4P57078 832 aa20.41■□□□□ 0.86
C19orf48-201ENST00000345523 PPIP5K1Q6PFW1 1433 aa20.41■□□□□ 0.86
C19orf48-201ENST00000345523 CPS1P31327 1500 aa20.4■□□□□ 0.86
C19orf48-201ENST00000345523 CDK12Q9NYV4 1490 aaPredicted RBP20.39■□□□□ 0.86
C19orf48-201ENST00000345523 IGHDP01880 384 aa20.39■□□□□ 0.85
C19orf48-201ENST00000345523 UBR1Q8IWV7 1749 aa20.39■□□□□ 0.85
C19orf48-201ENST00000345523 POLKQ9UBT6 870 aa20.38■□□□□ 0.85
C19orf48-201ENST00000345523 TMEM2Q9UHN6 1383 aa20.38■□□□□ 0.85
C19orf48-201ENST00000345523 RGS3P49796 1198 aa20.37■□□□□ 0.85
C19orf48-201ENST00000345523 SMC4Q9NTJ3 1288 aa20.37■□□□□ 0.85
C19orf48-201ENST00000345523 EXOSC9Q06265 439 aaKnown RBP20.37■□□□□ 0.85
C19orf48-201ENST00000345523 NRXN3Q9Y4C0 1643 aa20.36■□□□□ 0.85
C19orf48-201ENST00000345523 HAP1P54257 671 aaPredicted RBP20.36■□□□□ 0.85
C19orf48-201ENST00000345523 ATF7IPQ6VMQ6 1270 aa20.36■□□□□ 0.85
C19orf48-201ENST00000345523 WAPLQ7Z5K2 1190 aa20.36■□□□□ 0.85
C19orf48-201ENST00000345523 COG3Q96JB2 828 aa20.36■□□□□ 0.85
C19orf48-201ENST00000345523 RSPH6AQ9H0K4 717 aa20.36■□□□□ 0.85
C19orf48-201ENST00000345523 CEBPAP49715 358 aaPredicted RBP20.35■□□□□ 0.85
C19orf48-201ENST00000345523 HDAC1Q13547 482 aaPredicted RBP20.35■□□□□ 0.85
C19orf48-201ENST00000345523 NFE2L2Q16236 605 aa20.35■□□□□ 0.85
C19orf48-201ENST00000345523 NUDT16Q96DE0 195 aaKnown RBP20.35■□□□□ 0.85
C19orf48-201ENST00000345523 UPF2Q9HAU5 1272 aaKnown RBP20.35■□□□□ 0.85
C19orf48-201ENST00000345523 METP08581 1390 aa20.34■□□□□ 0.85
C19orf48-201ENST00000345523 GNAI1P63096 354 aa20.34■□□□□ 0.85
C19orf48-201ENST00000345523 ARHGAP45Q92619 1136 aa20.34■□□□□ 0.85
C19orf48-201ENST00000345523 PLEKHG1Q9ULL1 1385 aa20.34■□□□□ 0.85
C19orf48-201ENST00000345523 IFT57Q9NWB7 429 aa20.32■□□□□ 0.84
C19orf48-201ENST00000345523 SETD1BQ9UPS6 1966 aaKnown RBP20.31■□□□□ 0.84
C19orf48-201ENST00000345523 RLBP1P12271 317 aa20.31■□□□□ 0.84
C19orf48-201ENST00000345523 PRKAR2BP31323 418 aa20.31■□□□□ 0.84
C19orf48-201ENST00000345523 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.31■□□□□ 0.84
C19orf48-201ENST00000345523 ZNF142P52746 1687 aaPredicted RBP20.3■□□□□ 0.84
C19orf48-201ENST00000345523 IL13P35225 146 aa20.3■□□□□ 0.84
C19orf48-201ENST00000345523 BECN1Q14457 450 aa20.3■□□□□ 0.84
C19orf48-201ENST00000345523 SSH1Q8WYL5 1049 aa20.3■□□□□ 0.84
C19orf48-201ENST00000345523 PCDHB15Q9Y5E8 787 aa20.3■□□□□ 0.84
C19orf48-201ENST00000345523 LRRC7Q96NW7 1537 aa20.3■□□□□ 0.84
C19orf48-201ENST00000345523 NBR1Q14596 966 aa20.29■□□□□ 0.84
C19orf48-201ENST00000345523 TSR2Q969E8 191 aaKnown RBP20.29■□□□□ 0.84
C19orf48-201ENST00000345523 CEP170BQ9Y4F5 1589 aaPredicted RBP20.28■□□□□ 0.84
C19orf48-201ENST00000345523 PLEKHG3A1L390 1219 aa20.28■□□□□ 0.84
C19orf48-201ENST00000345523 TRIM27P14373 513 aa20.28■□□□□ 0.84
C19orf48-201ENST00000345523 PLPPR3Q6T4P5 718 aa20.28■□□□□ 0.84
C19orf48-201ENST00000345523 TXNDC2Q86VQ3 553 aa20.27■□□□□ 0.84
C19orf48-201ENST00000345523 MON2Q7Z3U7 1717 aa20.27■□□□□ 0.84
C19orf48-201ENST00000345523 EIF5BO60841 1220 aaKnown RBP20.27■□□□□ 0.83
C19orf48-201ENST00000345523 BCL2L13Q9BXK5 485 aa20.27■□□□□ 0.83
C19orf48-201ENST00000345523 PDZRN3Q9UPQ7 1066 aa20.27■□□□□ 0.83
C19orf48-201ENST00000345523 EID1Q9Y6B2 187 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms