RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 ZSCAN30Q86W11 494 aa13.91□□□□□ -0.18
CCDC87-201ENST00000333861 MTHFSP49914 203 aa13.9□□□□□ -0.18
CCDC87-201ENST00000333861 TMEM132EQ6IEE7 984 aa13.9□□□□□ -0.18
CCDC87-201ENST00000333861 PMFBP1Q8TBY8 1022 aa13.9□□□□□ -0.18
CCDC87-201ENST00000333861 FRMPD1Q5SYB0 1578 aa13.9□□□□□ -0.18
CCDC87-201ENST00000333861 TRPM1Q7Z4N2 1603 aa13.9□□□□□ -0.18
CCDC87-201ENST00000333861 OFD1O75665 1012 aa13.9□□□□□ -0.18
CCDC87-201ENST00000333861 BCL11BQ9C0K0 894 aaPredicted RBP13.89□□□□□ -0.19
CCDC87-201ENST00000333861 DIP2CQ9Y2E4 1556 aa13.89□□□□□ -0.19
CCDC87-201ENST00000333861 IQGAP3Q86VI3 1631 aa13.88□□□□□ -0.19
CCDC87-201ENST00000333861 NOB1Q9ULX3 412 aaKnown RBP13.88□□□□□ -0.19
CCDC87-201ENST00000333861 INSRP06213 1382 aa13.88□□□□□ -0.19
CCDC87-201ENST00000333861 CFAP65Q6ZU64 1925 aaKnown RBP13.88□□□□□ -0.19
CCDC87-201ENST00000333861 TMEM57Q8N5G2 664 aa13.87□□□□□ -0.19
CCDC87-201ENST00000333861 RNF214Q8ND24 703 aa13.87□□□□□ -0.19
CCDC87-201ENST00000333861 GAS2L2Q8NHY3 880 aa13.87□□□□□ -0.19
CCDC87-201ENST00000333861 DDX49Q9Y6V7 483 aaKnown RBP13.87□□□□□ -0.19
CCDC87-201ENST00000333861 TRIM27P14373 513 aa13.87□□□□□ -0.19
CCDC87-201ENST00000333861 NOL8Q76FK4 1167 aaKnown RBP13.87□□□□□ -0.19
CCDC87-201ENST00000333861 MCTP1Q6DN14 999 aa13.87□□□□□ -0.19
CCDC87-201ENST00000333861 DZIP1LQ8IYY4 767 aaKnown RBP13.87□□□□□ -0.19
CCDC87-201ENST00000333861 SSH1Q8WYL5 1049 aa13.87□□□□□ -0.19
CCDC87-201ENST00000333861 MVPQ14764 893 aaKnown RBP13.86□□□□□ -0.19
CCDC87-201ENST00000333861 ANKRD45Q5TZF3 282 aa13.86□□□□□ -0.19
CCDC87-201ENST00000333861 CAVIN1Q6NZI2 390 aaKnown RBP13.86□□□□□ -0.19
CCDC87-201ENST00000333861 ANP32BQ92688 251 aaKnown RBP13.86□□□□□ -0.19
CCDC87-201ENST00000333861 THUMPD2Q9BTF0 503 aaKnown RBP13.86□□□□□ -0.19
CCDC87-201ENST00000333861 PLPPR3Q6T4P5 718 aa13.86□□□□□ -0.19
CCDC87-201ENST00000333861 ATAD2Q6PL18 1390 aa13.86□□□□□ -0.19
CCDC87-201ENST00000333861 CCDC173Q0VFZ6 552 aa13.85□□□□□ -0.19
CCDC87-201ENST00000333861 VIRMAQ69YN4 1812 aaKnown RBP13.85□□□□□ -0.19
CCDC87-201ENST00000333861 IGSF3O75054 1194 aa13.84□□□□□ -0.19
CCDC87-201ENST00000333861 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.84□□□□□ -0.19
CCDC87-201ENST00000333861 GBP4Q96PP9 640 aa13.84□□□□□ -0.19
CCDC87-201ENST00000333861 ADGRF5Q8IZF2 1346 aa13.84□□□□□ -0.19
CCDC87-201ENST00000333861 FGD1P98174 961 aa13.84□□□□□ -0.19
CCDC87-201ENST00000333861 ATP10AO60312 1499 aa13.84□□□□□ -0.19
CCDC87-201ENST00000333861 MROH1Q8NDA8 1641 aa13.84□□□□□ -0.19
CCDC87-201ENST00000333861 ZKSCAN2Q63HK3 967 aa13.83□□□□□ -0.2
CCDC87-201ENST00000333861 PRDM15P57071 1507 aaPredicted RBP13.83□□□□□ -0.2
CCDC87-201ENST00000333861 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.83□□□□□ -0.2
CCDC87-201ENST00000333861 DEPDC5O75140 1603 aa13.82□□□□□ -0.2
CCDC87-201ENST00000333861 GPRASP1Q5JY77 1395 aa13.82□□□□□ -0.2
CCDC87-201ENST00000333861 FBXO31Q5XUX0 539 aaPredicted RBP13.82□□□□□ -0.2
CCDC87-201ENST00000333861 RUNDC1Q96C34 613 aa13.82□□□□□ -0.2
CCDC87-201ENST00000333861 RBSNQ9H1K0 784 aa13.82□□□□□ -0.2
CCDC87-201ENST00000333861 EIF2AK4Q9P2K8 1649 aaKnown RBP13.82□□□□□ -0.2
CCDC87-201ENST00000333861 CBX1P83916 185 aa13.81□□□□□ -0.2
CCDC87-201ENST00000333861 C16orf71Q8IYS4 520 aaPredicted RBP13.81□□□□□ -0.2
CCDC87-201ENST00000333861 ESF1Q9H501 851 aaKnown RBP13.81□□□□□ -0.2
CCDC87-201ENST00000333861 UGGT1Q9NYU2 1555 aa13.81□□□□□ -0.2
CCDC87-201ENST00000333861 RAB3GAP1Q15042 981 aa13.81□□□□□ -0.2
CCDC87-201ENST00000333861 C17orf53Q8N3J3 647 aaPredicted RBP13.81□□□□□ -0.2
CCDC87-201ENST00000333861 ZNF830Q96NB3 372 aaPredicted RBP13.81□□□□□ -0.2
CCDC87-201ENST00000333861 NSFL1CQ9UNZ2 370 aaKnown RBP13.81□□□□□ -0.2
CCDC87-201ENST00000333861 CEP152O94986 1710 aa13.81□□□□□ -0.2
CCDC87-201ENST00000333861 PPP1R9BQ96SB3 815 aa13.8□□□□□ -0.2
CCDC87-201ENST00000333861 NPATQ14207 1427 aa13.8□□□□□ -0.2
CCDC87-201ENST00000333861 DDIT3P35638 169 aa13.8□□□□□ -0.2
CCDC87-201ENST00000333861 GGNBP2Q9H3C7 697 aa13.8□□□□□ -0.2
CCDC87-201ENST00000333861 ASXL1Q8IXJ9 1541 aa13.8□□□□□ -0.2
CCDC87-201ENST00000333861 KIF2CQ99661 725 aa13.8□□□□□ -0.2
CCDC87-201ENST00000333861 PRIM1P49642 420 aaKnown RBP13.79□□□□□ -0.2
CCDC87-201ENST00000333861 PRPF40AO75400 957 aaKnown RBP13.79□□□□□ -0.2
CCDC87-201ENST00000333861 ZGPATQ8N5A5 531 aaKnown RBP13.79□□□□□ -0.2
CCDC87-201ENST00000333861 VWDEQ8N2E2 1590 aa13.79□□□□□ -0.2
CCDC87-201ENST00000333861 TET3O43151 1660 aa13.78□□□□□ -0.2
CCDC87-201ENST00000333861 ABCC3O15438 1527 aa13.78□□□□□ -0.2
CCDC87-201ENST00000333861 NSD3Q9BZ95 1437 aa13.78□□□□□ -0.2
CCDC87-201ENST00000333861 DNTTIP2Q5QJE6 756 aaKnown RBP13.77□□□□□ -0.2
CCDC87-201ENST00000333861 OTUD7AQ8TE49 926 aaPredicted RBP13.77□□□□□ -0.2
CCDC87-201ENST00000333861 MAPK8IP2Q13387 824 aaPredicted RBP13.77□□□□□ -0.21
CCDC87-201ENST00000333861 BBXQ8WY36 941 aaPredicted RBP13.77□□□□□ -0.21
CCDC87-201ENST00000333861 CABP2Q9NPB3 220 aa13.77□□□□□ -0.21
CCDC87-201ENST00000333861 STK26Q9P289 416 aa13.77□□□□□ -0.21
CCDC87-201ENST00000333861 EFCAB6Q5THR3 1501 aa13.77□□□□□ -0.21
CCDC87-201ENST00000333861 RNF17Q9BXT8 1623 aaKnown RBP13.77□□□□□ -0.21
CCDC87-201ENST00000333861 BAG4O95429 457 aaKnown RBP13.77□□□□□ -0.21
CCDC87-201ENST00000333861 TBC1D9Q6ZT07 1266 aa13.77□□□□□ -0.21
CCDC87-201ENST00000333861 ISY1Q9ULR0 285 aaKnown RBP13.76□□□□□ -0.21
CCDC87-201ENST00000333861 SPDYE4A6NLX3 237 aa13.76□□□□□ -0.21
CCDC87-201ENST00000333861 ZSCAN23Q3MJ62 389 aa13.76□□□□□ -0.21
CCDC87-201ENST00000333861 SMC5Q8IY18 1101 aa13.76□□□□□ -0.21
CCDC87-201ENST00000333861 GDPD2Q9HCC8 539 aa13.76□□□□□ -0.21
CCDC87-201ENST00000333861 PTPRTO14522 1441 aa13.76□□□□□ -0.21
CCDC87-201ENST00000333861 SMARCA5O60264 1052 aaPredicted RBP13.75□□□□□ -0.21
CCDC87-201ENST00000333861 SKOR2Q2VWA4 1001 aaPredicted RBP13.75□□□□□ -0.21
CCDC87-201ENST00000333861 SYCE3A1L190 88 aa13.74□□□□□ -0.21
CCDC87-201ENST00000333861 IDI1Q13907 227 aa13.74□□□□□ -0.21
CCDC87-201ENST00000333861 TSHZ3Q63HK5 1081 aa13.74□□□□□ -0.21
CCDC87-201ENST00000333861 SMAP1Q8IYB5 467 aaPredicted RBP13.74□□□□□ -0.21
CCDC87-201ENST00000333861 NOL7Q9UMY1 257 aaKnown RBP13.74□□□□□ -0.21
CCDC87-201ENST00000333861 CDCA8Q53HL2 280 aa13.74□□□□□ -0.21
CCDC87-201ENST00000333861 ATF7IPQ6VMQ6 1270 aa13.74□□□□□ -0.21
CCDC87-201ENST00000333861 CHD1LQ86WJ1 897 aa13.74□□□□□ -0.21
CCDC87-201ENST00000333861 SIGLEC1Q9BZZ2 1709 aa13.74□□□□□ -0.21
CCDC87-201ENST00000333861 TRPM2O94759 1503 aa13.74□□□□□ -0.21
CCDC87-201ENST00000333861 CLTCL1P53675 1640 aa13.74□□□□□ -0.21
CCDC87-201ENST00000333861 GOLGA6L22H0YM25 854 aa13.74□□□□□ -0.21
CCDC87-201ENST00000333861 SPHKAPQ2M3C7 1700 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms