RNA–Protein interactions for RNA: ENST00000332397.6

SPDYE3-201, Transcript of speedy/RINGO cell cycle regulator family member E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPDYE3, Length 3,185 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3-201ENST00000332397 LMTK2Q8IWU2 1503 aa13.37□□□□□ -0.27
SPDYE3-201ENST00000332397 SOX12O15370 315 aa13.37□□□□□ -0.27
SPDYE3-201ENST00000332397 BRPF3Q9ULD4 1205 aa13.37□□□□□ -0.27
SPDYE3-201ENST00000332397 IFT172Q9UG01 1749 aa13.37□□□□□ -0.27
SPDYE3-201ENST00000332397 PRKAR2BP31323 418 aa13.37□□□□□ -0.27
SPDYE3-201ENST00000332397 GSE1Q14687 1217 aa13.37□□□□□ -0.27
SPDYE3-201ENST00000332397 SLC52A1Q9NWF4 448 aa13.37□□□□□ -0.27
SPDYE3-201ENST00000332397 TRIM35Q9UPQ4 493 aa13.37□□□□□ -0.27
SPDYE3-201ENST00000332397 ZRANB1Q9UGI0 708 aa13.36□□□□□ -0.27
SPDYE3-201ENST00000332397 NCKAP5LQ9HCH0 1330 aa13.36□□□□□ -0.27
SPDYE3-201ENST00000332397 GLIPR1L2Q4G1C9 344 aa13.36□□□□□ -0.27
SPDYE3-201ENST00000332397 USP19O94966 1318 aa13.36□□□□□ -0.27
SPDYE3-201ENST00000332397 PPLO60437 1756 aa13.36□□□□□ -0.27
SPDYE3-201ENST00000332397 PHF23Q9BUL5 403 aaPredicted RBP13.36□□□□□ -0.27
SPDYE3-201ENST00000332397 TMEM57Q8N5G2 664 aa13.35□□□□□ -0.27
SPDYE3-201ENST00000332397 C1orf115Q9H7X2 142 aa13.35□□□□□ -0.27
SPDYE3-201ENST00000332397 SETBP1Q9Y6X0 1596 aa13.35□□□□□ -0.27
SPDYE3-201ENST00000332397 SHPRHQ149N8 1683 aa13.35□□□□□ -0.27
SPDYE3-201ENST00000332397 BECN1Q14457 450 aa13.34□□□□□ -0.27
SPDYE3-201ENST00000332397 VSIG10Q8N0Z9 540 aa13.34□□□□□ -0.27
SPDYE3-201ENST00000332397 EMILIN1Q9Y6C2 1016 aa13.34□□□□□ -0.27
SPDYE3-201ENST00000332397 NINLQ9Y2I6 1382 aa13.34□□□□□ -0.27
SPDYE3-201ENST00000332397 IQSEC2Q5JU85 1478 aa13.34□□□□□ -0.27
SPDYE3-201ENST00000332397 CCDC27Q2M243 656 aa13.34□□□□□ -0.27
SPDYE3-201ENST00000332397 SIGLEC1Q9BZZ2 1709 aa13.34□□□□□ -0.27
SPDYE3-201ENST00000332397 ATF7IPQ6VMQ6 1270 aa13.33□□□□□ -0.28
SPDYE3-201ENST00000332397 TXNDC2Q86VQ3 553 aa13.33□□□□□ -0.28
SPDYE3-201ENST00000332397 PLEKHF1Q96S99 279 aa13.33□□□□□ -0.28
SPDYE3-201ENST00000332397 LNPKQ9C0E8 428 aa13.33□□□□□ -0.28
SPDYE3-201ENST00000332397 CAMSAP1Q5T5Y3 1602 aa13.33□□□□□ -0.28
SPDYE3-201ENST00000332397 MYO3AQ8NEV4 1616 aa13.33□□□□□ -0.28
SPDYE3-201ENST00000332397 RRS1Q15050 365 aaKnown RBP13.32□□□□□ -0.28
SPDYE3-201ENST00000332397 ZMYND15Q9H091 742 aa13.32□□□□□ -0.28
SPDYE3-201ENST00000332397 ABCC11Q96J66 1382 aa13.32□□□□□ -0.28
SPDYE3-201ENST00000332397 NME9Q86XW9 330 aa13.32□□□□□ -0.28
SPDYE3-201ENST00000332397 PHACTR3Q96KR7 559 aa13.32□□□□□ -0.28
SPDYE3-201ENST00000332397 NEXMIFQ5QGS0 1516 aa13.32□□□□□ -0.28
SPDYE3-201ENST00000332397 NEURL4Q96JN8 1562 aa13.32□□□□□ -0.28
SPDYE3-201ENST00000332397 ESF1Q9H501 851 aaKnown RBP13.32□□□□□ -0.28
SPDYE3-201ENST00000332397 YTHDC2Q9H6S0 1430 aaKnown RBP13.32□□□□□ -0.28
SPDYE3-201ENST00000332397 ATAD2Q6PL18 1390 aa13.31□□□□□ -0.28
SPDYE3-201ENST00000332397 NSD2O96028 1365 aa13.31□□□□□ -0.28
SPDYE3-201ENST00000332397 DDX19BQ9UMR2 479 aa13.3□□□□□ -0.28
SPDYE3-201ENST00000332397 DCTN1Q14203 1278 aa13.3□□□□□ -0.28
SPDYE3-201ENST00000332397 POLKQ9UBT6 870 aa13.29□□□□□ -0.28
SPDYE3-201ENST00000332397 FAM83GA6ND36 823 aa13.29□□□□□ -0.28
SPDYE3-201ENST00000332397 PDE4CQ08493 712 aa13.29□□□□□ -0.28
SPDYE3-201ENST00000332397 TSPYL6Q8N831 410 aa13.29□□□□□ -0.28
SPDYE3-201ENST00000332397 DIP2CQ9Y2E4 1556 aa13.29□□□□□ -0.28
SPDYE3-201ENST00000332397 ARHGEF28Q8N1W1 1705 aaKnown RBP13.28□□□□□ -0.28
SPDYE3-201ENST00000332397 TBC1D2Q9BYX2 928 aa13.28□□□□□ -0.28
SPDYE3-201ENST00000332397 GZF1Q9H116 711 aaPredicted RBP13.28□□□□□ -0.28
SPDYE3-201ENST00000332397 ZC3H13Q5T200 1668 aaKnown RBP13.28□□□□□ -0.28
SPDYE3-201ENST00000332397 PIK3C2BO00750 1634 aa13.27□□□□□ -0.28
SPDYE3-201ENST00000332397 CFAP74Q9C0B2 1584 aa13.27□□□□□ -0.28
SPDYE3-201ENST00000332397 NEO1Q92859 1461 aa13.27□□□□□ -0.29
SPDYE3-201ENST00000332397 IPO8O15397 1037 aaKnown RBP13.27□□□□□ -0.29
SPDYE3-201ENST00000332397 TBC1D32Q96NH3 1257 aa13.27□□□□□ -0.29
SPDYE3-201ENST00000332397 ANKRD45Q5TZF3 282 aa13.26□□□□□ -0.29
SPDYE3-201ENST00000332397 PUS7Q96PZ0 661 aaKnown RBP13.26□□□□□ -0.29
SPDYE3-201ENST00000332397 C22orf23Q9BZE7 217 aa13.26□□□□□ -0.29
SPDYE3-201ENST00000332397 APBB1O00213 710 aa13.26□□□□□ -0.29
SPDYE3-201ENST00000332397 AEBP2Q6ZN18 517 aaPredicted RBP13.26□□□□□ -0.29
SPDYE3-201ENST00000332397 MYO5BQ9ULV0 1848 aa13.26□□□□□ -0.29
SPDYE3-201ENST00000332397 FOXD4L1Q9NU39 408 aa13.26□□□□□ -0.29
SPDYE3-201ENST00000332397 PTPRMP28827 1452 aa13.25□□□□□ -0.29
SPDYE3-201ENST00000332397 RSPH6AQ9H0K4 717 aa13.25□□□□□ -0.29
SPDYE3-201ENST00000332397 PNNQ9H307 717 aaKnown RBP13.25□□□□□ -0.29
SPDYE3-201ENST00000332397 FCHSD2O94868 740 aa13.24□□□□□ -0.29
SPDYE3-201ENST00000332397 KIF16BQ96L93 1317 aa13.24□□□□□ -0.29
SPDYE3-201ENST00000332397 COG3Q96JB2 828 aa13.23□□□□□ -0.29
SPDYE3-201ENST00000332397 CD163L1Q9NR16 1453 aa13.23□□□□□ -0.29
SPDYE3-201ENST00000332397 AAMPQ13685 434 aa13.23□□□□□ -0.29
SPDYE3-201ENST00000332397 NFE2L2Q16236 605 aa13.23□□□□□ -0.29
SPDYE3-201ENST00000332397 ZBTB40Q9NUA8 1239 aa13.23□□□□□ -0.29
SPDYE3-201ENST00000332397 KRT24Q2M2I5 525 aa13.22□□□□□ -0.29
SPDYE3-201ENST00000332397 NUDT16Q96DE0 195 aaKnown RBP13.22□□□□□ -0.29
SPDYE3-201ENST00000332397 CT47B1P0C2W7 299 aaPredicted RBP13.22□□□□□ -0.29
SPDYE3-201ENST00000332397 MBIPQ9NS73 344 aa13.22□□□□□ -0.29
SPDYE3-201ENST00000332397 AEBP1Q8IUX7 1158 aa13.22□□□□□ -0.29
SPDYE3-201ENST00000332397 WASLO00401 505 aaPredicted RBP13.21□□□□□ -0.29
SPDYE3-201ENST00000332397 C8orf58Q8NAV2 365 aa13.21□□□□□ -0.29
SPDYE3-201ENST00000332397 TSPOAP1O95153 1857 aa13.21□□□□□ -0.29
SPDYE3-201ENST00000332397 ARHGAP31Q2M1Z3 1444 aa13.21□□□□□ -0.3
SPDYE3-201ENST00000332397 TWISTNBQ3B726 338 aaPredicted RBP13.21□□□□□ -0.3
SPDYE3-201ENST00000332397 HDAC1Q13547 482 aaPredicted RBP13.2□□□□□ -0.3
SPDYE3-201ENST00000332397 CHD1LQ86WJ1 897 aa13.2□□□□□ -0.3
SPDYE3-201ENST00000332397 COL3A1P02461 1466 aaPredicted RBP13.2□□□□□ -0.3
SPDYE3-201ENST00000332397 PPIP5K1Q6PFW1 1433 aa13.2□□□□□ -0.3
SPDYE3-201ENST00000332397 RIMS2Q9UQ26 1411 aa13.2□□□□□ -0.3
SPDYE3-201ENST00000332397 VAMP4O75379 141 aa13.2□□□□□ -0.3
SPDYE3-201ENST00000332397 ALKQ9UM73 1620 aa13.19□□□□□ -0.3
SPDYE3-201ENST00000332397 HSP90AA1P07900 732 aaKnown RBP13.19□□□□□ -0.3
SPDYE3-201ENST00000332397 HSCBQ8IWL3 235 aa13.19□□□□□ -0.3
SPDYE3-201ENST00000332397 METP08581 1390 aa13.19□□□□□ -0.3
SPDYE3-201ENST00000332397 IL16Q14005 1332 aa13.19□□□□□ -0.3
SPDYE3-201ENST00000332397 PDIA4P13667 645 aaKnown RBP13.19□□□□□ -0.3
SPDYE3-201ENST00000332397 SULT6B1Q6IMI4 303 aa13.19□□□□□ -0.3
SPDYE3-201ENST00000332397 SMC5Q8IY18 1101 aa13.19□□□□□ -0.3
SPDYE3-201ENST00000332397 MIS18AQ9NYP9 233 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms