RNA–Protein interactions for RNA: ENST00000323347.14

SMARCD2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2 BASIC

Gene SMARCD2, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-202ENST00000323347 IL16Q14005 1332 aa20.43■□□□□ 0.86
SMARCD2-202ENST00000323347 CABP1Q9NZU7 370 aa20.43■□□□□ 0.86
SMARCD2-202ENST00000323347 TECPR2O15040 1411 aa20.42■□□□□ 0.86
SMARCD2-202ENST00000323347 ZMYM3Q14202 1370 aa20.41■□□□□ 0.86
SMARCD2-202ENST00000323347 CLUAP1Q96AJ1 413 aa20.41■□□□□ 0.86
SMARCD2-202ENST00000323347 SKAP1Q86WV1 359 aa20.41■□□□□ 0.86
SMARCD2-202ENST00000323347 PNNQ9H307 717 aaKnown RBP20.41■□□□□ 0.86
SMARCD2-202ENST00000323347 KNDC1Q76NI1 1749 aa20.4■□□□□ 0.86
SMARCD2-202ENST00000323347 CPSF1Q10570 1443 aaKnown RBP20.4■□□□□ 0.86
SMARCD2-202ENST00000323347 FAM135BQ49AJ0 1406 aa20.4■□□□□ 0.86
SMARCD2-202ENST00000323347 TMPOP42166 694 aaKnown RBP20.4■□□□□ 0.86
SMARCD2-202ENST00000323347 PRKCSHP14314 528 aaPredicted RBP20.39■□□□□ 0.86
SMARCD2-202ENST00000323347 FAM161AQ3B820 660 aa20.39■□□□□ 0.86
SMARCD2-202ENST00000323347 TRIM35Q9UPQ4 493 aa20.39■□□□□ 0.85
SMARCD2-202ENST00000323347 DIAPH1O60610 1272 aaKnown RBP20.37■□□□□ 0.85
SMARCD2-202ENST00000323347 IGHDP01880 384 aa20.37■□□□□ 0.85
SMARCD2-202ENST00000323347 HDGFP51858 240 aaKnown RBP20.37■□□□□ 0.85
SMARCD2-202ENST00000323347 WAPLQ7Z5K2 1190 aa20.37■□□□□ 0.85
SMARCD2-202ENST00000323347 PANK1Q8TE04 598 aa20.37■□□□□ 0.85
SMARCD2-202ENST00000323347 C8orf34Q49A92 452 aa20.37■□□□□ 0.85
SMARCD2-202ENST00000323347 LMTK3Q96Q04 1460 aa20.36■□□□□ 0.85
SMARCD2-202ENST00000323347 WASLO00401 505 aaPredicted RBP20.36■□□□□ 0.85
SMARCD2-202ENST00000323347 CANXP27824 592 aaKnown RBP20.36■□□□□ 0.85
SMARCD2-202ENST00000323347 COG6Q9Y2V7 657 aa20.36■□□□□ 0.85
SMARCD2-202ENST00000323347 EDC4Q6P2E9 1401 aaKnown RBP20.36■□□□□ 0.85
SMARCD2-202ENST00000323347 FCHSD2O94868 740 aa20.35■□□□□ 0.85
SMARCD2-202ENST00000323347 SENP3Q9H4L4 574 aaPredicted RBP20.35■□□□□ 0.85
SMARCD2-202ENST00000323347 METP08581 1390 aa20.35■□□□□ 0.85
SMARCD2-202ENST00000323347 CPS1P31327 1500 aa20.35■□□□□ 0.85
SMARCD2-202ENST00000323347 U2SURPO15042 1029 aaKnown RBP20.35■□□□□ 0.85
SMARCD2-202ENST00000323347 DDRGK1Q96HY6 314 aa20.34■□□□□ 0.85
SMARCD2-202ENST00000323347 MAPK8IP3Q9UPT6 1336 aa20.34■□□□□ 0.85
SMARCD2-202ENST00000323347 MLECQ14165 292 aa20.33■□□□□ 0.85
SMARCD2-202ENST00000323347 PMFBP1Q8TBY8 1022 aa20.33■□□□□ 0.85
SMARCD2-202ENST00000323347 TNRQ92752 1358 aa20.33■□□□□ 0.84
SMARCD2-202ENST00000323347 NPM2Q86SE8 214 aaKnown RBP20.33■□□□□ 0.84
SMARCD2-202ENST00000323347 POLKQ9UBT6 870 aa20.33■□□□□ 0.84
SMARCD2-202ENST00000323347 AATKQ6ZMQ8 1374 aa20.32■□□□□ 0.84
SMARCD2-202ENST00000323347 FRAT1Q92837 279 aaPredicted RBP20.32■□□□□ 0.84
SMARCD2-202ENST00000323347 RLBP1P12271 317 aa20.31■□□□□ 0.84
SMARCD2-202ENST00000323347 PPIP5K1Q6PFW1 1433 aa20.3■□□□□ 0.84
SMARCD2-202ENST00000323347 ESF1Q9H501 851 aaKnown RBP20.3■□□□□ 0.84
SMARCD2-202ENST00000323347 TMEM2Q9UHN6 1383 aa20.3■□□□□ 0.84
SMARCD2-202ENST00000323347 ZKSCAN2Q63HK3 967 aa20.29■□□□□ 0.84
SMARCD2-202ENST00000323347 UBR1Q8IWV7 1749 aa20.29■□□□□ 0.84
SMARCD2-202ENST00000323347 RSPH6AQ9H0K4 717 aa20.29■□□□□ 0.84
SMARCD2-202ENST00000323347 MON2Q7Z3U7 1717 aa20.29■□□□□ 0.84
SMARCD2-202ENST00000323347 LRRC7Q96NW7 1537 aa20.28■□□□□ 0.84
SMARCD2-202ENST00000323347 RIPK4P57078 832 aa20.28■□□□□ 0.84
SMARCD2-202ENST00000323347 CDK12Q9NYV4 1490 aaPredicted RBP20.28■□□□□ 0.84
SMARCD2-202ENST00000323347 EXOSC9Q06265 439 aaKnown RBP20.27■□□□□ 0.84
SMARCD2-202ENST00000323347 MVPQ14764 893 aaKnown RBP20.27■□□□□ 0.84
SMARCD2-202ENST00000323347 PCDHB15Q9Y5E8 787 aa20.27■□□□□ 0.84
SMARCD2-202ENST00000323347 NUDT16Q96DE0 195 aaKnown RBP20.27■□□□□ 0.84
SMARCD2-202ENST00000323347 TNNQ9UQP3 1299 aa20.27■□□□□ 0.84
SMARCD2-202ENST00000323347 CCDC61Q9Y6R9 512 aa20.27■□□□□ 0.84
SMARCD2-202ENST00000323347 TSR2Q969E8 191 aaKnown RBP20.26■□□□□ 0.83
SMARCD2-202ENST00000323347 RGS3P49796 1198 aa20.25■□□□□ 0.83
SMARCD2-202ENST00000323347 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.25■□□□□ 0.83
SMARCD2-202ENST00000323347 AKAP12Q02952 1782 aa20.25■□□□□ 0.83
SMARCD2-202ENST00000323347 ADAMTS13Q76LX8 1427 aa20.25■□□□□ 0.83
SMARCD2-202ENST00000323347 TXNDC2Q86VQ3 553 aa20.25■□□□□ 0.83
SMARCD2-202ENST00000323347 DZIP1LQ8IYY4 767 aaKnown RBP20.25■□□□□ 0.83
SMARCD2-202ENST00000323347 ZNF692Q9BU19 519 aaPredicted RBP20.25■□□□□ 0.83
SMARCD2-202ENST00000323347 VIRMAQ69YN4 1812 aaKnown RBP20.24■□□□□ 0.83
SMARCD2-202ENST00000323347 BRPF1P55201 1214 aaPredicted RBP20.24■□□□□ 0.83
SMARCD2-202ENST00000323347 ZNF428Q96B54 188 aa20.24■□□□□ 0.83
SMARCD2-202ENST00000323347 BCL2L13Q9BXK5 485 aa20.24■□□□□ 0.83
SMARCD2-202ENST00000323347 MAP2P11137 1827 aaKnown RBP20.24■□□□□ 0.83
SMARCD2-202ENST00000323347 C3P01024 1663 aa20.24■□□□□ 0.83
SMARCD2-202ENST00000323347 ADAMTSL3P82987 1691 aa20.24■□□□□ 0.83
SMARCD2-202ENST00000323347 IL13P35225 146 aa20.23■□□□□ 0.83
SMARCD2-202ENST00000323347 ALDH1L2Q3SY69 923 aa20.23■□□□□ 0.83
SMARCD2-202ENST00000323347 SSH1Q8WYL5 1049 aa20.23■□□□□ 0.83
SMARCD2-202ENST00000323347 RWDD1Q9H446 243 aaPredicted RBP20.23■□□□□ 0.83
SMARCD2-202ENST00000323347 PLEKHG1Q9ULL1 1385 aa20.22■□□□□ 0.83
SMARCD2-202ENST00000323347 NFE2L2Q16236 605 aa20.21■□□□□ 0.83
SMARCD2-202ENST00000323347 PRKAR2BP31323 418 aa20.21■□□□□ 0.83
SMARCD2-202ENST00000323347 SMC4Q9NTJ3 1288 aa20.21■□□□□ 0.83
SMARCD2-202ENST00000323347 ATF7IPQ6VMQ6 1270 aa20.2■□□□□ 0.82
SMARCD2-202ENST00000323347 NME9Q86XW9 330 aa20.2■□□□□ 0.82
SMARCD2-202ENST00000323347 TRIM27P14373 513 aa20.19■□□□□ 0.82
SMARCD2-202ENST00000323347 CALD1Q05682 793 aaKnown RBP20.19■□□□□ 0.82
SMARCD2-202ENST00000323347 ROBO2Q9HCK4 1378 aa20.19■□□□□ 0.82
SMARCD2-202ENST00000323347 ITSN1Q15811 1721 aa20.19■□□□□ 0.82
SMARCD2-202ENST00000323347 NEFMP07197 916 aa20.19■□□□□ 0.82
SMARCD2-202ENST00000323347 DDX19BQ9UMR2 479 aa20.19■□□□□ 0.82
SMARCD2-202ENST00000323347 KIF16BQ96L93 1317 aa20.18■□□□□ 0.82
SMARCD2-202ENST00000323347 PRR36Q9H6K5 1346 aa20.18■□□□□ 0.82
SMARCD2-202ENST00000323347 SOCS7O14512 581 aa20.18■□□□□ 0.82
SMARCD2-202ENST00000323347 PPM1GO15355 546 aaPredicted RBP20.18■□□□□ 0.82
SMARCD2-202ENST00000323347 COG3Q96JB2 828 aa20.18■□□□□ 0.82
SMARCD2-202ENST00000323347 USP35Q9P2H5 1018 aa20.18■□□□□ 0.82
SMARCD2-202ENST00000323347 HDAC1Q13547 482 aaPredicted RBP20.17■□□□□ 0.82
SMARCD2-202ENST00000323347 FTSJ3Q8IY81 847 aaKnown RBP20.17■□□□□ 0.82
SMARCD2-202ENST00000323347 EMILIN1Q9Y6C2 1016 aa20.17■□□□□ 0.82
SMARCD2-202ENST00000323347 TOPAZ1Q8N9V7 1692 aa20.17■□□□□ 0.82
SMARCD2-202ENST00000323347 IPO8O15397 1037 aaKnown RBP20.17■□□□□ 0.82
SMARCD2-202ENST00000323347 FBLN1P23142 703 aa20.17■□□□□ 0.82
SMARCD2-202ENST00000323347 PLEKHG3A1L390 1219 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms