RNA–Protein interactions for RNA: ENST00000271620.7

PRUNE1-201, Transcript of prune exopolyphosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRUNE1, Length 2,997 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-201ENST00000271620 TRIM27P14373 513 aa13.86□□□□□ -0.19
PRUNE1-201ENST00000271620 ZKSCAN2Q63HK3 967 aa13.86□□□□□ -0.19
PRUNE1-201ENST00000271620 DZIP1LQ8IYY4 767 aaKnown RBP13.86□□□□□ -0.19
PRUNE1-201ENST00000271620 PTPRMP28827 1452 aa13.86□□□□□ -0.19
PRUNE1-201ENST00000271620 ARHGAP31Q2M1Z3 1444 aa13.86□□□□□ -0.19
PRUNE1-201ENST00000271620 PUS7Q96PZ0 661 aaKnown RBP13.86□□□□□ -0.19
PRUNE1-201ENST00000271620 NSD2O96028 1365 aa13.86□□□□□ -0.19
PRUNE1-201ENST00000271620 ELL2O00472 640 aaPredicted RBP13.86□□□□□ -0.19
PRUNE1-201ENST00000271620 MVPQ14764 893 aaKnown RBP13.86□□□□□ -0.19
PRUNE1-201ENST00000271620 NOB1Q9ULX3 412 aaKnown RBP13.85□□□□□ -0.19
PRUNE1-201ENST00000271620 ATAD2Q6PL18 1390 aa13.85□□□□□ -0.19
PRUNE1-201ENST00000271620 USP19O94966 1318 aa13.85□□□□□ -0.19
PRUNE1-201ENST00000271620 PRKAR2BP31323 418 aa13.85□□□□□ -0.19
PRUNE1-201ENST00000271620 TXNDC2Q86VQ3 553 aa13.85□□□□□ -0.19
PRUNE1-201ENST00000271620 PMFBP1Q8TBY8 1022 aa13.85□□□□□ -0.19
PRUNE1-201ENST00000271620 CD163L1Q9NR16 1453 aa13.84□□□□□ -0.19
PRUNE1-201ENST00000271620 NUTM2FA1L443 756 aa13.84□□□□□ -0.19
PRUNE1-201ENST00000271620 RICTORQ6R327 1708 aa13.84□□□□□ -0.19
PRUNE1-201ENST00000271620 EMILIN1Q9Y6C2 1016 aa13.84□□□□□ -0.19
PRUNE1-201ENST00000271620 PHACTR3Q96KR7 559 aa13.84□□□□□ -0.19
PRUNE1-201ENST00000271620 SLKQ9H2G2 1235 aaPredicted RBP13.83□□□□□ -0.2
PRUNE1-201ENST00000271620 POLKQ9UBT6 870 aa13.83□□□□□ -0.2
PRUNE1-201ENST00000271620 FRAT2O75474 233 aaPredicted RBP13.83□□□□□ -0.2
PRUNE1-201ENST00000271620 NME9Q86XW9 330 aa13.83□□□□□ -0.2
PRUNE1-201ENST00000271620 RWDD1Q9H446 243 aaPredicted RBP13.83□□□□□ -0.2
PRUNE1-201ENST00000271620 NINLQ9Y2I6 1382 aa13.83□□□□□ -0.2
PRUNE1-201ENST00000271620 PLPPR3Q6T4P5 718 aa13.82□□□□□ -0.2
PRUNE1-201ENST00000271620 TMEM131LA2VDJ0 1609 aa13.82□□□□□ -0.2
PRUNE1-201ENST00000271620 TSPOAP1O95153 1857 aa13.82□□□□□ -0.2
PRUNE1-201ENST00000271620 RRS1Q15050 365 aaKnown RBP13.81□□□□□ -0.2
PRUNE1-201ENST00000271620 TMEM57Q8N5G2 664 aa13.81□□□□□ -0.2
PRUNE1-201ENST00000271620 SPRYD3Q8NCJ5 442 aa13.81□□□□□ -0.2
PRUNE1-201ENST00000271620 ZFYVE9O95405 1425 aa13.81□□□□□ -0.2
PRUNE1-201ENST00000271620 PREX1Q8TCU6 1659 aa13.81□□□□□ -0.2
PRUNE1-201ENST00000271620 ATF7IPQ6VMQ6 1270 aa13.8□□□□□ -0.2
PRUNE1-201ENST00000271620 USP35Q9P2H5 1018 aa13.8□□□□□ -0.2
PRUNE1-201ENST00000271620 USP32Q8NFA0 1604 aa13.8□□□□□ -0.2
PRUNE1-201ENST00000271620 NLRP1Q9C000 1473 aa13.8□□□□□ -0.2
PRUNE1-201ENST00000271620 ALKQ9UM73 1620 aa13.79□□□□□ -0.2
PRUNE1-201ENST00000271620 SOX12O15370 315 aa13.79□□□□□ -0.2
PRUNE1-201ENST00000271620 RTN4Q9NQC3 1192 aaKnown RBP13.79□□□□□ -0.2
PRUNE1-201ENST00000271620 COL3A1P02461 1466 aaPredicted RBP13.78□□□□□ -0.2
PRUNE1-201ENST00000271620 TSPYL6Q8N831 410 aa13.78□□□□□ -0.2
PRUNE1-201ENST00000271620 IL27Q8NEV9 243 aa13.78□□□□□ -0.2
PRUNE1-201ENST00000271620 FAM83GA6ND36 823 aa13.77□□□□□ -0.2
PRUNE1-201ENST00000271620 DCTN1Q14203 1278 aa13.77□□□□□ -0.2
PRUNE1-201ENST00000271620 RSPH6AQ9H0K4 717 aa13.77□□□□□ -0.2
PRUNE1-201ENST00000271620 ESF1Q9H501 851 aaKnown RBP13.77□□□□□ -0.2
PRUNE1-201ENST00000271620 C1orf115Q9H7X2 142 aa13.77□□□□□ -0.2
PRUNE1-201ENST00000271620 ARHGEF40Q8TER5 1519 aa13.77□□□□□ -0.2
PRUNE1-201ENST00000271620 METP08581 1390 aa13.77□□□□□ -0.21
PRUNE1-201ENST00000271620 FCHSD2O94868 740 aa13.76□□□□□ -0.21
PRUNE1-201ENST00000271620 RIMS2Q9UQ26 1411 aa13.76□□□□□ -0.21
PRUNE1-201ENST00000271620 MFAP1P55081 439 aaKnown RBP13.76□□□□□ -0.21
PRUNE1-201ENST00000271620 DDX19BQ9UMR2 479 aa13.76□□□□□ -0.21
PRUNE1-201ENST00000271620 WASLO00401 505 aaPredicted RBP13.75□□□□□ -0.21
PRUNE1-201ENST00000271620 ADGRB2O60241 1585 aa13.75□□□□□ -0.21
PRUNE1-201ENST00000271620 NUDT16Q96DE0 195 aaKnown RBP13.75□□□□□ -0.21
PRUNE1-201ENST00000271620 UPF2Q9HAU5 1272 aaKnown RBP13.75□□□□□ -0.21
PRUNE1-201ENST00000271620 LNPKQ9C0E8 428 aa13.74□□□□□ -0.21
PRUNE1-201ENST00000271620 PNPLA6Q8IY17 1366 aa13.74□□□□□ -0.21
PRUNE1-201ENST00000271620 A2ML1A8K2U0 1454 aa13.74□□□□□ -0.21
PRUNE1-201ENST00000271620 GSE1Q14687 1217 aa13.74□□□□□ -0.21
PRUNE1-201ENST00000271620 PPIP5K1Q6PFW1 1433 aa13.73□□□□□ -0.21
PRUNE1-201ENST00000271620 CT47B1P0C2W7 299 aaPredicted RBP13.73□□□□□ -0.21
PRUNE1-201ENST00000271620 ZBTB40Q9NUA8 1239 aa13.73□□□□□ -0.21
PRUNE1-201ENST00000271620 AAMPQ13685 434 aa13.72□□□□□ -0.21
PRUNE1-201ENST00000271620 TBC1D32Q96NH3 1257 aa13.72□□□□□ -0.21
PRUNE1-201ENST00000271620 PNNQ9H307 717 aaKnown RBP13.72□□□□□ -0.21
PRUNE1-201ENST00000271620 LRRC7Q96NW7 1537 aa13.72□□□□□ -0.21
PRUNE1-201ENST00000271620 NFE2L2Q16236 605 aa13.71□□□□□ -0.21
PRUNE1-201ENST00000271620 COG3Q96JB2 828 aa13.71□□□□□ -0.21
PRUNE1-201ENST00000271620 MBIPQ9NS73 344 aa13.71□□□□□ -0.21
PRUNE1-201ENST00000271620 IPO8O15397 1037 aaKnown RBP13.71□□□□□ -0.21
PRUNE1-201ENST00000271620 IL13P35225 146 aa13.71□□□□□ -0.21
PRUNE1-201ENST00000271620 AEBP1Q8IUX7 1158 aa13.71□□□□□ -0.21
PRUNE1-201ENST00000271620 CLTCQ00610 1675 aaKnown RBP13.71□□□□□ -0.22
PRUNE1-201ENST00000271620 TBC1D2Q9BYX2 928 aa13.71□□□□□ -0.22
PRUNE1-201ENST00000271620 IL16Q14005 1332 aa13.7□□□□□ -0.22
PRUNE1-201ENST00000271620 KIF16BQ96L93 1317 aa13.7□□□□□ -0.22
PRUNE1-201ENST00000271620 VAMP4O75379 141 aa13.7□□□□□ -0.22
PRUNE1-201ENST00000271620 BECN1Q14457 450 aa13.7□□□□□ -0.22
PRUNE1-201ENST00000271620 KRT24Q2M2I5 525 aa13.7□□□□□ -0.22
PRUNE1-201ENST00000271620 NCBP3Q53F19 620 aaKnown RBP13.7□□□□□ -0.22
PRUNE1-201ENST00000271620 BRPF3Q9ULD4 1205 aa13.7□□□□□ -0.22
PRUNE1-201ENST00000271620 CCDC61Q9Y6R9 512 aa13.7□□□□□ -0.22
PRUNE1-201ENST00000271620 C8orf58Q8NAV2 365 aa13.7□□□□□ -0.22
PRUNE1-201ENST00000271620 HDAC1Q13547 482 aaPredicted RBP13.69□□□□□ -0.22
PRUNE1-201ENST00000271620 SLC26A8Q96RN1 970 aa13.69□□□□□ -0.22
PRUNE1-201ENST00000271620 ZMYM3Q14202 1370 aa13.69□□□□□ -0.22
PRUNE1-201ENST00000271620 CEBPAP49715 358 aaPredicted RBP13.69□□□□□ -0.22
PRUNE1-201ENST00000271620 PRR36Q9H6K5 1346 aa13.68□□□□□ -0.22
PRUNE1-201ENST00000271620 FAM135BQ49AJ0 1406 aa13.68□□□□□ -0.22
PRUNE1-201ENST00000271620 MED14O60244 1454 aa13.68□□□□□ -0.22
PRUNE1-201ENST00000271620 ANKRD45Q5TZF3 282 aa13.68□□□□□ -0.22
PRUNE1-201ENST00000271620 ARXQ96QS3 562 aa13.68□□□□□ -0.22
PRUNE1-201ENST00000271620 C22orf23Q9BZE7 217 aa13.68□□□□□ -0.22
PRUNE1-201ENST00000271620 TWISTNBQ3B726 338 aaPredicted RBP13.68□□□□□ -0.22
PRUNE1-201ENST00000271620 MAP2P11137 1827 aaKnown RBP13.67□□□□□ -0.22
PRUNE1-201ENST00000271620 SULT6B1Q6IMI4 303 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms