RNA–Protein interactions for RNA: ENST00000262158.6

SMAD7-201, Transcript of SMAD family member 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD7, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-201ENST00000262158 YTHDC2Q9H6S0 1430 aaKnown RBP24.64■■□□□ 1.54
SMAD7-201ENST00000262158 NUTM2FA1L443 756 aa24.64■■□□□ 1.53
SMAD7-201ENST00000262158 NGEFQ8N5V2 710 aa24.64■■□□□ 1.53
SMAD7-201ENST00000262158 PTPRMP28827 1452 aa24.63■■□□□ 1.53
SMAD7-201ENST00000262158 DZIP1LQ8IYY4 767 aaKnown RBP24.63■■□□□ 1.53
SMAD7-201ENST00000262158 TERF2IPQ9NYB0 399 aa24.63■■□□□ 1.53
SMAD7-201ENST00000262158 MVPQ14764 893 aaKnown RBP24.63■■□□□ 1.53
SMAD7-201ENST00000262158 ZKSCAN2Q63HK3 967 aa24.63■■□□□ 1.53
SMAD7-201ENST00000262158 EMILIN1Q9Y6C2 1016 aa24.63■■□□□ 1.53
SMAD7-201ENST00000262158 CD163L1Q9NR16 1453 aa24.62■■□□□ 1.53
SMAD7-201ENST00000262158 DIAPH1O60610 1272 aaKnown RBP24.62■■□□□ 1.53
SMAD7-201ENST00000262158 PHACTR3Q96KR7 559 aa24.62■■□□□ 1.53
SMAD7-201ENST00000262158 CFAP74Q9C0B2 1584 aa24.62■■□□□ 1.53
SMAD7-201ENST00000262158 PRKAR2BP31323 418 aa24.61■■□□□ 1.53
SMAD7-201ENST00000262158 CCDC27Q2M243 656 aa24.61■■□□□ 1.53
SMAD7-201ENST00000262158 PLPPR3Q6T4P5 718 aa24.6■■□□□ 1.53
SMAD7-201ENST00000262158 ANO8Q9HCE9 1232 aaPredicted RBP24.6■■□□□ 1.53
SMAD7-201ENST00000262158 TMEM57Q8N5G2 664 aa24.6■■□□□ 1.53
SMAD7-201ENST00000262158 NEO1Q92859 1461 aa24.59■■□□□ 1.53
SMAD7-201ENST00000262158 TXNDC2Q86VQ3 553 aa24.59■■□□□ 1.53
SMAD7-201ENST00000262158 HDGFL2Q7Z4V5 671 aaPredicted RBP24.59■■□□□ 1.53
SMAD7-201ENST00000262158 NME9Q86XW9 330 aa24.59■■□□□ 1.53
SMAD7-201ENST00000262158 PMFBP1Q8TBY8 1022 aa24.58■■□□□ 1.53
SMAD7-201ENST00000262158 TSPOAP1O95153 1857 aa24.58■■□□□ 1.53
SMAD7-201ENST00000262158 RICTORQ6R327 1708 aa24.58■■□□□ 1.52
SMAD7-201ENST00000262158 RRS1Q15050 365 aaKnown RBP24.57■■□□□ 1.52
SMAD7-201ENST00000262158 C1orf115Q9H7X2 142 aa24.57■■□□□ 1.52
SMAD7-201ENST00000262158 POLKQ9UBT6 870 aa24.56■■□□□ 1.52
SMAD7-201ENST00000262158 TMEM131LA2VDJ0 1609 aa24.55■■□□□ 1.52
SMAD7-201ENST00000262158 SOX12O15370 315 aa24.55■■□□□ 1.52
SMAD7-201ENST00000262158 RWDD1Q9H446 243 aaPredicted RBP24.55■■□□□ 1.52
SMAD7-201ENST00000262158 BRPF3Q9ULD4 1205 aa24.55■■□□□ 1.52
SMAD7-201ENST00000262158 TSPYL6Q8N831 410 aa24.54■■□□□ 1.52
SMAD7-201ENST00000262158 NSD2O96028 1365 aa24.54■■□□□ 1.52
SMAD7-201ENST00000262158 COL3A1P02461 1466 aaPredicted RBP24.54■■□□□ 1.52
SMAD7-201ENST00000262158 DCTN1Q14203 1278 aa24.53■■□□□ 1.52
SMAD7-201ENST00000262158 NLRP1Q9C000 1473 aa24.53■■□□□ 1.52
SMAD7-201ENST00000262158 PREX1Q8TCU6 1659 aa24.53■■□□□ 1.52
SMAD7-201ENST00000262158 FAM83GA6ND36 823 aa24.53■■□□□ 1.52
SMAD7-201ENST00000262158 USP32Q8NFA0 1604 aa24.53■■□□□ 1.52
SMAD7-201ENST00000262158 MFAP1P55081 439 aaKnown RBP24.53■■□□□ 1.52
SMAD7-201ENST00000262158 ATF7IPQ6VMQ6 1270 aa24.53■■□□□ 1.52
SMAD7-201ENST00000262158 ATAD2Q6PL18 1390 aa24.52■■□□□ 1.52
SMAD7-201ENST00000262158 ARHGAP31Q2M1Z3 1444 aa24.52■■□□□ 1.52
SMAD7-201ENST00000262158 NINLQ9Y2I6 1382 aa24.51■■□□□ 1.51
SMAD7-201ENST00000262158 USP35Q9P2H5 1018 aa24.51■■□□□ 1.51
SMAD7-201ENST00000262158 ALKQ9UM73 1620 aa24.5■■□□□ 1.51
SMAD7-201ENST00000262158 ARXQ96QS3 562 aa24.5■■□□□ 1.51
SMAD7-201ENST00000262158 GSE1Q14687 1217 aa24.49■■□□□ 1.51
SMAD7-201ENST00000262158 PUS7Q96PZ0 661 aaKnown RBP24.49■■□□□ 1.51
SMAD7-201ENST00000262158 LNPKQ9C0E8 428 aa24.48■■□□□ 1.51
SMAD7-201ENST00000262158 RSPH6AQ9H0K4 717 aa24.48■■□□□ 1.51
SMAD7-201ENST00000262158 ADGRB2O60241 1585 aa24.48■■□□□ 1.51
SMAD7-201ENST00000262158 ARHGEF40Q8TER5 1519 aa24.45■■□□□ 1.51
SMAD7-201ENST00000262158 METP08581 1390 aa24.45■■□□□ 1.51
SMAD7-201ENST00000262158 ZFYVE9O95405 1425 aa24.44■■□□□ 1.5
SMAD7-201ENST00000262158 TBC1D2Q9BYX2 928 aa24.44■■□□□ 1.5
SMAD7-201ENST00000262158 KRT24Q2M2I5 525 aa24.43■■□□□ 1.5
SMAD7-201ENST00000262158 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.43■■□□□ 1.5
SMAD7-201ENST00000262158 LRRC7Q96NW7 1537 aa24.43■■□□□ 1.5
SMAD7-201ENST00000262158 TBC1D32Q96NH3 1257 aa24.42■■□□□ 1.5
SMAD7-201ENST00000262158 AEBP1Q8IUX7 1158 aa24.41■■□□□ 1.5
SMAD7-201ENST00000262158 DDX19BQ9UMR2 479 aa24.41■■□□□ 1.5
SMAD7-201ENST00000262158 RIMS2Q9UQ26 1411 aa24.41■■□□□ 1.5
SMAD7-201ENST00000262158 ZBTB40Q9NUA8 1239 aa24.41■■□□□ 1.5
SMAD7-201ENST00000262158 FCHSD2O94868 740 aa24.39■■□□□ 1.5
SMAD7-201ENST00000262158 PRKCSHP14314 528 aaPredicted RBP24.39■■□□□ 1.49
SMAD7-201ENST00000262158 NUDT16Q96DE0 195 aaKnown RBP24.39■■□□□ 1.49
SMAD7-201ENST00000262158 UPF2Q9HAU5 1272 aaKnown RBP24.39■■□□□ 1.49
SMAD7-201ENST00000262158 MBIPQ9NS73 344 aa24.38■■□□□ 1.49
SMAD7-201ENST00000262158 WASLO00401 505 aaPredicted RBP24.38■■□□□ 1.49
SMAD7-201ENST00000262158 C8orf58Q8NAV2 365 aa24.38■■□□□ 1.49
SMAD7-201ENST00000262158 PNPLA6Q8IY17 1366 aa24.38■■□□□ 1.49
SMAD7-201ENST00000262158 A2ML1A8K2U0 1454 aa24.38■■□□□ 1.49
SMAD7-201ENST00000262158 PPIP5K1Q6PFW1 1433 aa24.38■■□□□ 1.49
SMAD7-201ENST00000262158 CLTCQ00610 1675 aaKnown RBP24.38■■□□□ 1.49
SMAD7-201ENST00000262158 VIRMAQ69YN4 1812 aaKnown RBP24.36■■□□□ 1.49
SMAD7-201ENST00000262158 VAMP4O75379 141 aa24.36■■□□□ 1.49
SMAD7-201ENST00000262158 IL13P35225 146 aa24.36■■□□□ 1.49
SMAD7-201ENST00000262158 NFE2L2Q16236 605 aa24.36■■□□□ 1.49
SMAD7-201ENST00000262158 MAP2P11137 1827 aaKnown RBP24.35■■□□□ 1.49
SMAD7-201ENST00000262158 BECN1Q14457 450 aa24.34■■□□□ 1.49
SMAD7-201ENST00000262158 C22orf23Q9BZE7 217 aa24.34■■□□□ 1.49
SMAD7-201ENST00000262158 ANKRD45Q5TZF3 282 aa24.33■■□□□ 1.49
SMAD7-201ENST00000262158 PRR36Q9H6K5 1346 aa24.33■■□□□ 1.48
SMAD7-201ENST00000262158 CPS1P31327 1500 aa24.32■■□□□ 1.48
SMAD7-201ENST00000262158 CEBPAP49715 358 aaPredicted RBP24.32■■□□□ 1.48
SMAD7-201ENST00000262158 HDAC1Q13547 482 aaPredicted RBP24.32■■□□□ 1.48
SMAD7-201ENST00000262158 FAM135BQ49AJ0 1406 aa24.32■■□□□ 1.48
SMAD7-201ENST00000262158 ESF1Q9H501 851 aaKnown RBP24.32■■□□□ 1.48
SMAD7-201ENST00000262158 MIS18AQ9NYP9 233 aa24.31■■□□□ 1.48
SMAD7-201ENST00000262158 COG3Q96JB2 828 aa24.31■■□□□ 1.48
SMAD7-201ENST00000262158 SMC5Q8IY18 1101 aa24.31■■□□□ 1.48
SMAD7-201ENST00000262158 MRPL50Q8N5N7 158 aaKnown RBP24.31■■□□□ 1.48
SMAD7-201ENST00000262158 ANTXR1Q9H6X2 564 aa24.31■■□□□ 1.48
SMAD7-201ENST00000262158 KIF16BQ96L93 1317 aa24.3■■□□□ 1.48
SMAD7-201ENST00000262158 MCM10Q7L590 875 aa24.3■■□□□ 1.48
SMAD7-201ENST00000262158 SLC26A8Q96RN1 970 aa24.3■■□□□ 1.48
SMAD7-201ENST00000262158 FOXD4L1Q9NU39 408 aa24.3■■□□□ 1.48
SMAD7-201ENST00000262158 IL16Q14005 1332 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms