RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 CDK19Q9BWU1 502 aa21.52■■□□□ 1.04
NDFIP1-201ENST00000253814 DRC7Q8IY82 874 aa21.52■■□□□ 1.04
NDFIP1-201ENST00000253814 NAP1L2Q9ULW6 460 aaPredicted RBP21.52■■□□□ 1.04
NDFIP1-201ENST00000253814 SHANK2Q9UPX8 1470 aa21.52■■□□□ 1.03
NDFIP1-201ENST00000253814 RAPGEF3O95398 923 aa21.52■■□□□ 1.03
NDFIP1-201ENST00000253814 NUP160Q12769 1436 aa21.51■■□□□ 1.03
NDFIP1-201ENST00000253814 FGD1P98174 961 aa21.51■■□□□ 1.03
NDFIP1-201ENST00000253814 RRS1Q15050 365 aaKnown RBP21.51■■□□□ 1.03
NDFIP1-201ENST00000253814 CHMP3Q9Y3E7 222 aa21.5■■□□□ 1.03
NDFIP1-201ENST00000253814 ZNF521Q96K83 1311 aa21.5■■□□□ 1.03
NDFIP1-201ENST00000253814 TRAPPC8Q9Y2L5 1435 aa21.5■■□□□ 1.03
NDFIP1-201ENST00000253814 SMARCA5O60264 1052 aaPredicted RBP21.5■■□□□ 1.03
NDFIP1-201ENST00000253814 TBC1D9Q6ZT07 1266 aa21.49■■□□□ 1.03
NDFIP1-201ENST00000253814 FKBP5Q13451 457 aaPredicted RBP21.48■■□□□ 1.03
NDFIP1-201ENST00000253814 RABEP1Q15276 862 aa21.48■■□□□ 1.03
NDFIP1-201ENST00000253814 AMPHP49418 695 aa21.48■■□□□ 1.03
NDFIP1-201ENST00000253814 TARBP1Q13395 1621 aaKnown RBP21.48■■□□□ 1.03
NDFIP1-201ENST00000253814 CIZ1Q9ULV3 898 aaPredicted RBP21.47■■□□□ 1.03
NDFIP1-201ENST00000253814 POLR3AO14802 1390 aaPredicted RBP21.47■■□□□ 1.03
NDFIP1-201ENST00000253814 CHAF1AQ13111 956 aaPredicted RBP21.46■■□□□ 1.03
NDFIP1-201ENST00000253814 CCDC173Q0VFZ6 552 aa21.46■■□□□ 1.03
NDFIP1-201ENST00000253814 SULT6B1Q6IMI4 303 aa21.45■■□□□ 1.02
NDFIP1-201ENST00000253814 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.45■■□□□ 1.02
NDFIP1-201ENST00000253814 EMILIN1Q9Y6C2 1016 aa21.45■■□□□ 1.02
NDFIP1-201ENST00000253814 ADGBQ8N7X0 1667 aa21.44■■□□□ 1.02
NDFIP1-201ENST00000253814 FCHSD2O94868 740 aa21.44■■□□□ 1.02
NDFIP1-201ENST00000253814 HDAC1Q13547 482 aaPredicted RBP21.44■■□□□ 1.02
NDFIP1-201ENST00000253814 WAPLQ7Z5K2 1190 aa21.44■■□□□ 1.02
NDFIP1-201ENST00000253814 TSPYL4Q9UJ04 414 aa21.44■■□□□ 1.02
NDFIP1-201ENST00000253814 MIS18AQ9NYP9 233 aa21.44■■□□□ 1.02
NDFIP1-201ENST00000253814 SLC4A2P04920 1241 aa21.43■■□□□ 1.02
NDFIP1-201ENST00000253814 TRMT2AQ8IZ69 625 aaKnown RBP21.43■■□□□ 1.02
NDFIP1-201ENST00000253814 NGDNQ8NEJ9 315 aaKnown RBP21.43■■□□□ 1.02
NDFIP1-201ENST00000253814 C14orf93Q9H972 538 aaKnown RBP21.43■■□□□ 1.02
NDFIP1-201ENST00000253814 EIF2S2P20042 333 aaKnown RBP21.43■■□□□ 1.02
NDFIP1-201ENST00000253814 FAM83GA6ND36 823 aa21.43■■□□□ 1.02
NDFIP1-201ENST00000253814 NFE2L2Q16236 605 aa21.42■■□□□ 1.02
NDFIP1-201ENST00000253814 NUCB1Q02818 461 aa21.42■■□□□ 1.02
NDFIP1-201ENST00000253814 BMP2KLQ5H9B9 411 aa21.41■■□□□ 1.02
NDFIP1-201ENST00000253814 ISY1Q9ULR0 285 aaKnown RBP21.41■■□□□ 1.02
NDFIP1-201ENST00000253814 DUOX2Q9NRD8 1548 aa21.41■■□□□ 1.02
NDFIP1-201ENST00000253814 TXNDC2Q86VQ3 553 aa21.4■■□□□ 1.02
NDFIP1-201ENST00000253814 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.4■■□□□ 1.02
NDFIP1-201ENST00000253814 EXOC6BQ9Y2D4 811 aa21.4■■□□□ 1.02
NDFIP1-201ENST00000253814 EIF2AK4Q9P2K8 1649 aaKnown RBP21.4■■□□□ 1.02
NDFIP1-201ENST00000253814 PLA2R1Q13018 1463 aa21.39■■□□□ 1.02
NDFIP1-201ENST00000253814 SYCE3A1L190 88 aa21.39■■□□□ 1.02
NDFIP1-201ENST00000253814 USP19O94966 1318 aa21.39■■□□□ 1.01
NDFIP1-201ENST00000253814 FYB1O15117 783 aa21.39■■□□□ 1.01
NDFIP1-201ENST00000253814 CLCN1P35523 988 aa21.39■■□□□ 1.01
NDFIP1-201ENST00000253814 IDI1Q13907 227 aa21.39■■□□□ 1.01
NDFIP1-201ENST00000253814 CCDC27Q2M243 656 aa21.39■■□□□ 1.01
NDFIP1-201ENST00000253814 TSPYL6Q8N831 410 aa21.39■■□□□ 1.01
NDFIP1-201ENST00000253814 BCL11BQ9C0K0 894 aaPredicted RBP21.39■■□□□ 1.01
NDFIP1-201ENST00000253814 ZRSR1Q15695 479 aaKnown RBP21.38■■□□□ 1.01
NDFIP1-201ENST00000253814 C16orf71Q8IYS4 520 aaPredicted RBP21.38■■□□□ 1.01
NDFIP1-201ENST00000253814 GAS2L2Q8NHY3 880 aa21.38■■□□□ 1.01
NDFIP1-201ENST00000253814 EIF4G3O43432 1585 aaKnown RBP21.38■■□□□ 1.01
NDFIP1-201ENST00000253814 PHF14O94880 888 aa21.38■■□□□ 1.01
NDFIP1-201ENST00000253814 BAG4O95429 457 aaKnown RBP21.38■■□□□ 1.01
NDFIP1-201ENST00000253814 MCM10Q7L590 875 aa21.38■■□□□ 1.01
NDFIP1-201ENST00000253814 SMC5Q8IY18 1101 aa21.38■■□□□ 1.01
NDFIP1-201ENST00000253814 ZBTB40Q9NUA8 1239 aa21.38■■□□□ 1.01
NDFIP1-201ENST00000253814 WDR7Q9Y4E6 1490 aa21.38■■□□□ 1.01
NDFIP1-201ENST00000253814 INSRP06213 1382 aa21.37■■□□□ 1.01
NDFIP1-201ENST00000253814 ALDH1L2Q3SY69 923 aa21.37■■□□□ 1.01
NDFIP1-201ENST00000253814 UPF3BQ9BZI7 483 aaKnown RBP21.37■■□□□ 1.01
NDFIP1-201ENST00000253814 RBM27Q9P2N5 1060 aaKnown RBP21.37■■□□□ 1.01
NDFIP1-201ENST00000253814 TSHZ3Q63HK5 1081 aa21.37■■□□□ 1.01
NDFIP1-201ENST00000253814 ZSCAN30Q86W11 494 aa21.37■■□□□ 1.01
NDFIP1-201ENST00000253814 NME9Q86XW9 330 aa21.37■■□□□ 1.01
NDFIP1-201ENST00000253814 ZNF428Q96B54 188 aa21.37■■□□□ 1.01
NDFIP1-201ENST00000253814 MAP4K4O95819 1239 aaPredicted RBP21.36■■□□□ 1.01
NDFIP1-201ENST00000253814 UBE2Q2Q8WVN8 375 aa21.36■■□□□ 1.01
NDFIP1-201ENST00000253814 XPCQ01831 940 aaPredicted RBP21.36■■□□□ 1.01
NDFIP1-201ENST00000253814 NUTM2GQ5VZR2 741 aa21.36■■□□□ 1.01
NDFIP1-201ENST00000253814 ABCC10Q5T3U5 1492 aa21.36■■□□□ 1.01
NDFIP1-201ENST00000253814 HDGFP51858 240 aaKnown RBP21.36■■□□□ 1.01
NDFIP1-201ENST00000253814 VPS37CA5D8V6 355 aaPredicted RBP21.35■■□□□ 1.01
NDFIP1-201ENST00000253814 ERC2O15083 957 aa21.35■■□□□ 1.01
NDFIP1-201ENST00000253814 PLCH2O75038 1416 aa21.35■■□□□ 1.01
NDFIP1-201ENST00000253814 F6X3S4 739 aa21.34■■□□□ 1.01
NDFIP1-201ENST00000253814 MBIPQ9NS73 344 aa21.34■■□□□ 1.01
NDFIP1-201ENST00000253814 PKNOX2Q96KN3 472 aa21.34■■□□□ 1.01
NDFIP1-201ENST00000253814 KDM5DQ9BY66 1539 aa21.34■■□□□ 1.01
NDFIP1-201ENST00000253814 TPM2P07951 284 aa21.33■■□□□ 1.01
NDFIP1-201ENST00000253814 CCDC9Q9Y3X0 531 aaKnown RBP21.33■■□□□ 1.01
NDFIP1-201ENST00000253814 ADGRL1O94910 1474 aa21.33■■□□□ 1.01
NDFIP1-201ENST00000253814 RRP9O43818 475 aaKnown RBP21.33■■□□□ 1
NDFIP1-201ENST00000253814 GDPD2Q9HCC8 539 aa21.33■■□□□ 1
NDFIP1-201ENST00000253814 NPC1L1Q9UHC9 1359 aa21.33■■□□□ 1
NDFIP1-201ENST00000253814 IL1RAPL2Q9NP60 686 aa21.32■■□□□ 1
NDFIP1-201ENST00000253814 CFAP65Q6ZU64 1925 aaKnown RBP21.32■■□□□ 1
NDFIP1-201ENST00000253814 PHACTR3Q96KR7 559 aa21.32■■□□□ 1
NDFIP1-201ENST00000253814 FIBPO43427 364 aa21.32■■□□□ 1
NDFIP1-201ENST00000253814 RPGRIP1LQ68CZ1 1315 aa21.32■■□□□ 1
NDFIP1-201ENST00000253814 ATAD2Q6PL18 1390 aa21.31■■□□□ 1
NDFIP1-201ENST00000253814 ABCC11Q96J66 1382 aa21.31■■□□□ 1
NDFIP1-201ENST00000253814 CEP170Q5SW79 1584 aa21.31■■□□□ 1
NDFIP1-201ENST00000253814 ANTXR1Q9H6X2 564 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms