RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 AFMIDQ63HM1 303 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 NUGGCQ68CJ6 796 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 PDZD4Q76G19 769 aaPredicted RBP18.07■□□□□ 0.48
PHGDH-232ENST00000641947 PCGF5Q86SE9 256 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 TADA2BQ86TJ2 420 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 HOOK3Q86VS8 718 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 CIR1Q86X95 450 aaPredicted RBP18.07■□□□□ 0.48
PHGDH-232ENST00000641947 KRT222Q8N1A0 295 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 ABHD8Q96I13 439 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 SPATA13Q96N96 652 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 CYP2S1Q96SQ9 504 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 RBM15Q96T37 977 aaKnown RBP eCLIP18.07■□□□□ 0.484e-7■■■□□ 17.3
PHGDH-232ENST00000641947 WDR83Q9BRX9 315 aaKnown RBP18.07■□□□□ 0.48
PHGDH-232ENST00000641947 KLF16Q9BXK1 252 aaPredicted RBP18.07■□□□□ 0.48
PHGDH-232ENST00000641947 SLC39A8Q9C0K1 460 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 NACA2Q9H009 215 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 CATSPERBQ9H7T0 1116 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 NINJ2Q9NZG7 142 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 SEPT10Q9P0V9 454 aa18.07■□□□□ 0.48
PHGDH-232ENST00000641947 UXTQ9UBK9 157 aaPredicted RBP18.07■□□□□ 0.48
PHGDH-232ENST00000641947 STC2O76061 302 aa18.06■□□□□ 0.48
PHGDH-232ENST00000641947 KPNA1P52294 538 aaPredicted RBP18.06■□□□□ 0.48
PHGDH-232ENST00000641947 ZXDBP98169 803 aa18.06■□□□□ 0.48
PHGDH-232ENST00000641947 CYP4F8P98187 520 aa18.06■□□□□ 0.48
PHGDH-232ENST00000641947 UBE3AQ05086 875 aa18.06■□□□□ 0.48
PHGDH-232ENST00000641947 ZNF844Q08AG5 666 aa18.06■□□□□ 0.48
PHGDH-232ENST00000641947 ZBTB17Q13105 803 aa18.06■□□□□ 0.48
PHGDH-232ENST00000641947 MTM1Q13496 603 aa18.06■□□□□ 0.48
PHGDH-232ENST00000641947 SLC29A2Q14542 456 aa18.06■□□□□ 0.48
PHGDH-232ENST00000641947 TXNDC8Q6A555 127 aa18.06■□□□□ 0.48
PHGDH-232ENST00000641947 TFAP2DQ7Z6R9 452 aa18.06■□□□□ 0.48
PHGDH-232ENST00000641947 ITIH5Q86UX2 942 aa18.06■□□□□ 0.48
PHGDH-232ENST00000641947 ZNF567Q8N184 647 aa18.06■□□□□ 0.48
PHGDH-232ENST00000641947 UHMK1Q8TAS1 419 aaKnown RBP18.06■□□□□ 0.48
PHGDH-232ENST00000641947 ZSCAN18Q8TBC5 510 aaPredicted RBP18.06■□□□□ 0.48
PHGDH-232ENST00000641947 ZNF419Q96HQ0 510 aaPredicted RBP18.06■□□□□ 0.48
PHGDH-232ENST00000641947 ACBD3Q9H3P7 528 aa18.06■□□□□ 0.48
PHGDH-232ENST00000641947 PPARGC1AQ9UBK2 798 aaKnown RBP18.06■□□□□ 0.48
PHGDH-232ENST00000641947 C5orf42Q9H799 3197 aa18.06■□□□□ 0.48
PHGDH-232ENST00000641947 PDE4DIPQ5VU43 2346 aa18.06■□□□□ 0.48
PHGDH-232ENST00000641947 CCL16O15467 120 aa18.05■□□□□ 0.48
PHGDH-232ENST00000641947 OLFM2O95897 454 aa18.05■□□□□ 0.48
PHGDH-232ENST00000641947 LRG1P02750 347 aa18.05■□□□□ 0.48
PHGDH-232ENST00000641947 IRF1P10914 325 aa18.05■□□□□ 0.48
PHGDH-232ENST00000641947 TACR2P21452 398 aa18.05■□□□□ 0.48
PHGDH-232ENST00000641947 PTPN3P26045 913 aa18.05■□□□□ 0.48
PHGDH-232ENST00000641947 GABRR2P28476 465 aa18.05■□□□□ 0.48
PHGDH-232ENST00000641947 MAGEA6P43360 314 aa18.05■□□□□ 0.48
PHGDH-232ENST00000641947 KYNUQ16719 465 aa18.05■□□□□ 0.48
PHGDH-232ENST00000641947 HP1BP3Q5SSJ5 553 aaPredicted RBP18.05■□□□□ 0.48
PHGDH-232ENST00000641947 RFWD3Q6PCD5 774 aa18.05■□□□□ 0.48
PHGDH-232ENST00000641947 CHSY1Q86X52 802 aa18.05■□□□□ 0.48
PHGDH-232ENST00000641947 RELL1Q8IUW5 271 aa18.05■□□□□ 0.48
PHGDH-232ENST00000641947 ADAMTS19Q8TE59 1207 aa18.05■□□□□ 0.48
PHGDH-232ENST00000641947 ARL8AQ96BM9 186 aa18.05■□□□□ 0.48
PHGDH-232ENST00000641947 C9orf72Q96LT7 481 aa18.05■□□□□ 0.48
PHGDH-232ENST00000641947 GORASP1Q9BQQ3 440 aa18.05■□□□□ 0.48
PHGDH-232ENST00000641947 ZYG11BQ9C0D3 744 aa18.05■□□□□ 0.48
PHGDH-232ENST00000641947 TRPC7Q9HCX4 862 aa18.05■□□□□ 0.48
PHGDH-232ENST00000641947 SAYSD1Q9NPB0 183 aa18.05■□□□□ 0.48
PHGDH-232ENST00000641947 HCFC1R1Q9NWW0 138 aa18.05■□□□□ 0.48
PHGDH-232ENST00000641947 SLC12A6Q9UHW9 1150 aa18.05■□□□□ 0.48
PHGDH-232ENST00000641947 ASB3Q9Y575 518 aa18.05■□□□□ 0.48
PHGDH-232ENST00000641947 DRGXA6NNA5 263 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 DFFAO00273 331 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 CHADO15335 359 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 NCAM2O15394 837 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 ACSL4O60488 711 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 RFPL2O75678 378 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 ACSL3O95573 720 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 ACTN2P35609 894 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 PPP3CCP48454 512 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 LRIG3Q6UXM1 1119 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 CCDC149Q6ZUS6 474 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 DENND1CQ8IV53 801 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 CCDC13Q8IYE1 715 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 AGGF1Q8N302 714 aaeCLIP18.04■□□□□ 0.48
PHGDH-232ENST00000641947 PLD4Q96BZ4 506 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 FOXP3Q9BZS1 431 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 TMEM248Q9NWD8 314 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 SMPD4Q9NXE4 827 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 RB1P06400 928 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 NUDT17P0C025 328 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 EPCAMP16422 314 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 RHOQP17081 205 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 GJA1P17302 382 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 MX2P20592 715 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 CORO1AP31146 461 aaKnown RBP18.04■□□□□ 0.48
PHGDH-232ENST00000641947 CCR2P41597 374 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 MAGEA4P43358 317 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 HIF1AQ16665 826 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 TTMPQ5BVD1 217 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 STXBP5Q5T5C0 1151 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 COL13A1Q5TAT6 717 aaPredicted RBP18.04■□□□□ 0.48
PHGDH-232ENST00000641947 ARHGEF18Q6ZSZ5 1173 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 ZNF534Q76KX8 674 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 TRMT10CQ7L0Y3 403 aaKnown RBP18.04■□□□□ 0.48
PHGDH-232ENST00000641947 ARL14EPQ8N8R7 260 aaPredicted RBP18.04■□□□□ 0.48
PHGDH-232ENST00000641947 MICAL1Q8TDZ2 1067 aa18.04■□□□□ 0.48
PHGDH-232ENST00000641947 PRICKLE1Q96MT3 831 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms