RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 BTBD8Q5XKL5 378 aa20.22■□□□□ 0.83
PCDHB11-202ENST00000624887 MARK2Q7KZI7 788 aaKnown RBP20.22■□□□□ 0.83
PCDHB11-202ENST00000624887 HAPLN3Q96S86 360 aa20.22■□□□□ 0.83
PCDHB11-202ENST00000624887 ZCWPW1Q9H0M4 648 aa20.22■□□□□ 0.83
PCDHB11-202ENST00000624887 SMOC2Q9H3U7 446 aa20.22■□□□□ 0.83
PCDHB11-202ENST00000624887 PIH1D1Q9NWS0 290 aaKnown RBP20.22■□□□□ 0.83
PCDHB11-202ENST00000624887 KANSL3Q9P2N6 904 aa20.22■□□□□ 0.83
PCDHB11-202ENST00000624887 NEU3Q9UQ49 428 aa20.22■□□□□ 0.83
PCDHB11-202ENST00000624887 USH1CQ9Y6N9 552 aa20.22■□□□□ 0.83
PCDHB11-202ENST00000624887 NUP205Q92621 2012 aa20.22■□□□□ 0.83
PCDHB11-202ENST00000624887 ZBTB24O43167 697 aaPredicted RBP20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 RASSF9O75901 435 aa20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 OR4Q2P0C623 313 aa20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 BNIP1Q12981 228 aa20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 BMPR2Q13873 1038 aa20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 CRYMQ14894 314 aa20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 TEX44Q53QW1 395 aa20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 LHX8Q68G74 356 aa20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 TIFABQ6ZNK6 161 aa20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 CDHR3Q6ZTQ4 885 aa20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 SCD5Q86SK9 330 aa20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 DPF3Q92784 378 aa20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 IQCGQ9H095 443 aaKnown RBP20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 GBA3Q9H227 469 aa20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 SLC40A1Q9NP59 571 aa20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 TBC1D13Q9NVG8 400 aa20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 SYBUQ9NX95 663 aa20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 ERI2A8K979 691 aaKnown RBP20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 CD68P34810 354 aaPredicted RBP20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 OR1G1P47890 313 aa20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 ZNF33AQ06730 810 aa20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 ZBTB17Q13105 803 aa20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 NAB1Q13506 487 aa20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 KCTD11Q693B1 232 aa20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 DCP1BQ8IZD4 617 aaKnown RBP20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 UNC5BQ8IZJ1 945 aa20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 CDKL2Q92772 493 aa20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 STARD7Q9NQZ5 370 aa20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 PLLPQ9Y342 182 aa20.21■□□□□ 0.83
PCDHB11-202ENST00000624887 CCR1P32246 355 aa20.2■□□□□ 0.82
PCDHB11-202ENST00000624887 HTR7P34969 479 aa20.2■□□□□ 0.82
PCDHB11-202ENST00000624887 PGFP49763 221 aa20.2■□□□□ 0.82
PCDHB11-202ENST00000624887 MROH9Q5TGP6 573 aa20.2■□□□□ 0.82
PCDHB11-202ENST00000624887 ITPRIPL1Q6GPH6 555 aa20.2■□□□□ 0.82
PCDHB11-202ENST00000624887 PTPRN2Q92932 1015 aa20.2■□□□□ 0.82
PCDHB11-202ENST00000624887 THOC1Q96FV9 657 aaKnown RBP20.2■□□□□ 0.82
PCDHB11-202ENST00000624887 FTHL17Q9BXU8 183 aa20.2■□□□□ 0.82
PCDHB11-202ENST00000624887 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 HOXC13P31276 330 aa20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 SERPINB4P48594 390 aa20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 OR52K1Q8NGK4 314 aa20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 ZSCAN18Q8TBC5 510 aaPredicted RBP20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 C10orf82Q8WW14 230 aa20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 CASP10Q92851 521 aa20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 FUBP3Q96I24 572 aaKnown RBP eCLIP20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 TEKT5Q96M29 485 aa20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 AGAP3Q96P47 875 aa20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 SIK2Q9H0K1 926 aa20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 ABI2Q9NYB9 513 aaPredicted RBP20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 TRIM17Q9Y577 477 aa20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 SHROOM3Q8TF72 1996 aa20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 BRCA2P51587 3418 aa20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 POLBP06746 335 aa20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 SRGAP2BP0DMP2 458 aa20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 COG7P83436 770 aa20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 PPP2R5DQ14738 602 aa20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 NFE2Q16621 373 aaPredicted RBP20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 FYB2Q5VWT5 728 aa20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 RWDD4Q6NW29 188 aaKnown RBP20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 ZNF449Q6P9G9 518 aa20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 SCN4BQ8IWT1 228 aa20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 ANKLE1Q8NAG6 615 aa20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 ZNF398Q8TD17 642 aa20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 CELF6Q96J87 481 aaKnown RBP20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 FAM193BQ96PV7 902 aaPredicted RBP20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 ALG13Q9NP73 1137 aaKnown RBP20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 CASS4Q9NQ75 786 aa20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 TMEM161AQ9NX61 479 aa20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 DNAJB4Q9UDY4 337 aa20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 SFMBT1Q9UHJ3 866 aa20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 PRG3Q9Y2Y8 225 aaPredicted RBP20.19■□□□□ 0.82
PCDHB11-202ENST00000624887 MYO16Q9Y6X6 1858 aa20.18■□□□□ 0.82
PCDHB11-202ENST00000624887 PAGE1O75459 146 aa20.18■□□□□ 0.82
PCDHB11-202ENST00000624887 COL6A1P12109 1028 aa20.18■□□□□ 0.82
PCDHB11-202ENST00000624887 OLIG2Q13516 323 aa20.18■□□□□ 0.82
PCDHB11-202ENST00000624887 SPANXN3Q5MJ09 141 aa20.18■□□□□ 0.82
PCDHB11-202ENST00000624887 MANEALQ5VSG8 457 aa20.18■□□□□ 0.82
PCDHB11-202ENST00000624887 MLPHQ9BV36 600 aaPredicted RBP20.18■□□□□ 0.82
PCDHB11-202ENST00000624887 SLC13A1Q9BZW2 595 aa20.18■□□□□ 0.82
PCDHB11-202ENST00000624887 NMUR1Q9HB89 426 aa20.18■□□□□ 0.82
PCDHB11-202ENST00000624887 BFARQ9NZS9 450 aa20.18■□□□□ 0.82
PCDHB11-202ENST00000624887 ARVCFO00192 962 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 KLF11O14901 512 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 SYN3O14994 580 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 FGF10O15520 208 aaPredicted RBP20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 TROVE2P10155 538 aaKnown RBP eCLIP20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 NFKB1P19838 968 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 ALDH3A1P30838 453 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 CRHR1P34998 444 aa20.17■□□□□ 0.82
PCDHB11-202ENST00000624887 NCALDP61601 193 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms