RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 CCDC137Q6PK04 289 aaKnown RBP11.9□□□□□ -0.5
CTCFL-221ENST00000608903 HDXQ7Z353 690 aa11.9□□□□□ -0.5
CTCFL-221ENST00000608903 ARHGAP12Q8IWW6 846 aa11.9□□□□□ -0.5
CTCFL-221ENST00000608903 FAM217AQ8IXS0 508 aa11.9□□□□□ -0.5
CTCFL-221ENST00000608903 OR52K2Q8NGK3 314 aa11.9□□□□□ -0.5
CTCFL-221ENST00000608903 ZSCAN18Q8TBC5 510 aaPredicted RBP11.9□□□□□ -0.5
CTCFL-221ENST00000608903 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.9□□□□□ -0.5
CTCFL-221ENST00000608903 FGF13Q92913 245 aa11.9□□□□□ -0.5
CTCFL-221ENST00000608903 OLFM3Q96PB7 478 aa11.9□□□□□ -0.5
CTCFL-221ENST00000608903 SLITRK6Q9H5Y7 841 aa11.9□□□□□ -0.5
CTCFL-221ENST00000608903 TDP1Q9NUW8 608 aa11.9□□□□□ -0.5
CTCFL-221ENST00000608903 NEU2Q9Y3R4 380 aa11.9□□□□□ -0.5
CTCFL-221ENST00000608903 MYOFQ9NZM1 2061 aa11.9□□□□□ -0.5
CTCFL-221ENST00000608903 TTI1O43156 1089 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 DAPK3O43293 454 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 ETS1P14921 441 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 VIPR2P41587 438 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 SLC11A2P49281 568 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 GDF10P55107 478 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 CLUL1Q15846 466 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 ZNF77Q15935 545 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 FAM78AQ5JUQ0 283 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 EP400NLQ6ZTU2 488 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 TFAP2DQ7Z6R9 452 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 ZC3H18Q86VM9 953 aaKnown RBP11.89□□□□□ -0.51
CTCFL-221ENST00000608903 MAIP1Q8WWC4 291 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 MYLIPQ8WY64 445 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 NKD2Q969F2 451 aaPredicted RBP11.89□□□□□ -0.51
CTCFL-221ENST00000608903 CELF6Q96J87 481 aaKnown RBP11.89□□□□□ -0.51
CTCFL-221ENST00000608903 MYADMQ96S97 322 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 LINC00597Q9H2U6 94 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 PPARGC1AQ9UBK2 798 aaKnown RBP11.89□□□□□ -0.51
CTCFL-221ENST00000608903 PCYOX1Q9UHG3 505 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 ZFP37Q9Y6Q3 630 aaPredicted RBP11.89□□□□□ -0.51
CTCFL-221ENST00000608903 NUP210Q8TEM1 1887 aaPredicted RBP11.89□□□□□ -0.51
CTCFL-221ENST00000608903 CLUHO75153 1309 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 SOBPA7XYQ1 873 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 WASH4PA8MWX3 477 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 BHMG1C9JSJ3 638 aaPredicted RBP11.89□□□□□ -0.51
CTCFL-221ENST00000608903 HOXB8P17481 243 aaPredicted RBP11.89□□□□□ -0.51
CTCFL-221ENST00000608903 CHRNA3P32297 505 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 AVPR1AP37288 418 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 EIF3EP60228 445 aaKnown RBP11.89□□□□□ -0.51
CTCFL-221ENST00000608903 AFMIDQ63HM1 303 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 C8orf74Q6P047 294 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 DRICH1Q6PGQ1 229 aaPredicted RBP11.89□□□□□ -0.51
CTCFL-221ENST00000608903 ARHGAP36Q6ZRI8 547 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 GET4Q7L5D6 327 aaPredicted RBP11.89□□□□□ -0.51
CTCFL-221ENST00000608903 RTL3Q8N8U3 475 aaKnown RBP11.89□□□□□ -0.51
CTCFL-221ENST00000608903 AENQ8WTP8 325 aaKnown RBP11.89□□□□□ -0.51
CTCFL-221ENST00000608903 P3H4Q92791 437 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 PABPC5Q96DU9 382 aaKnown RBP11.89□□□□□ -0.51
CTCFL-221ENST00000608903 RPRD1AQ96P16 312 aaPredicted RBP11.89□□□□□ -0.51
CTCFL-221ENST00000608903 TRIM51Q9BSJ1 452 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 TMEM121Q9BTD3 319 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 USP29Q9HBJ7 922 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 STIM2Q9P246 746 aa11.89□□□□□ -0.51
CTCFL-221ENST00000608903 NYNRINQ9P2P1 1898 aaKnown RBP11.89□□□□□ -0.51
CTCFL-221ENST00000608903 GOLGA6L10A0A0M3HER8 536 aa11.88□□□□□ -0.51
CTCFL-221ENST00000608903 ZSCAN5DPP0CG00 497 aa11.88□□□□□ -0.51
CTCFL-221ENST00000608903 RBP3P10745 1247 aa11.88□□□□□ -0.51
CTCFL-221ENST00000608903 VAV1P15498 845 aa11.88□□□□□ -0.51
CTCFL-221ENST00000608903 ZNF135P52742 658 aaPredicted RBP11.88□□□□□ -0.51
CTCFL-221ENST00000608903 USP4Q13107 963 aa11.88□□□□□ -0.51
CTCFL-221ENST00000608903 BYSLQ13895 437 aaKnown RBP11.88□□□□□ -0.51
CTCFL-221ENST00000608903 DEPDC1BQ8WUY9 529 aa11.88□□□□□ -0.51
CTCFL-221ENST00000608903 GUCD1Q96NT3 240 aa11.88□□□□□ -0.51
CTCFL-221ENST00000608903 LGMNQ99538 433 aa11.88□□□□□ -0.51
CTCFL-221ENST00000608903 CDX2Q99626 313 aaPredicted RBP11.88□□□□□ -0.51
CTCFL-221ENST00000608903 ZYG11BQ9C0D3 744 aa11.88□□□□□ -0.51
CTCFL-221ENST00000608903 SLC39A8Q9C0K1 460 aa11.88□□□□□ -0.51
CTCFL-221ENST00000608903 TMEM248Q9NWD8 314 aa11.88□□□□□ -0.51
CTCFL-221ENST00000608903 CLEC4EQ9ULY5 219 aa11.88□□□□□ -0.51
CTCFL-221ENST00000608903 DRG1Q9Y295 367 aaKnown RBP11.88□□□□□ -0.51
CTCFL-221ENST00000608903 C5orf42Q9H799 3197 aa11.88□□□□□ -0.51
CTCFL-221ENST00000608903 ESYT3A0FGR9 886 aa11.87□□□□□ -0.51
CTCFL-221ENST00000608903 F5H5T6 163 aa11.87□□□□□ -0.51
CTCFL-221ENST00000608903 LATS1O95835 1130 aa11.87□□□□□ -0.51
CTCFL-221ENST00000608903 ZFXP17010 805 aaPredicted RBP11.87□□□□□ -0.51
CTCFL-221ENST00000608903 RHOQP17081 205 aa11.87□□□□□ -0.51
CTCFL-221ENST00000608903 FCARP24071 287 aa11.87□□□□□ -0.51
CTCFL-221ENST00000608903 HTR7P34969 479 aa11.87□□□□□ -0.51
CTCFL-221ENST00000608903 FNTAP49354 379 aa11.87□□□□□ -0.51
CTCFL-221ENST00000608903 NUMBP49757 651 aa11.87□□□□□ -0.51
CTCFL-221ENST00000608903 CCDC85BQ15834 202 aaPredicted RBP11.87□□□□□ -0.51
CTCFL-221ENST00000608903 TTC13Q8NBP0 860 aa11.87□□□□□ -0.51
CTCFL-221ENST00000608903 ASB16Q96NS5 453 aa11.87□□□□□ -0.51
CTCFL-221ENST00000608903 POMKQ9H5K3 350 aa11.87□□□□□ -0.51
CTCFL-221ENST00000608903 PSD3Q9NYI0 1048 aa11.87□□□□□ -0.51
CTCFL-221ENST00000608903 SH3BP1Q9Y3L3 701 aa11.87□□□□□ -0.51
CTCFL-221ENST00000608903 SPTBN5Q9NRC6 3674 aaKnown RBP11.87□□□□□ -0.51
CTCFL-221ENST00000608903 DENND4AQ7Z401 1863 aa11.87□□□□□ -0.51
CTCFL-221ENST00000608903 CHD5Q8TDI0 1954 aa11.87□□□□□ -0.51
CTCFL-221ENST00000608903 E2F8A0AVK6 867 aa11.87□□□□□ -0.51
CTCFL-221ENST00000608903 FGF10O15520 208 aaPredicted RBP11.87□□□□□ -0.51
CTCFL-221ENST00000608903 TCF3P15923 654 aa11.87□□□□□ -0.51
CTCFL-221ENST00000608903 MCM3P25205 808 aa11.87□□□□□ -0.51
CTCFL-221ENST00000608903 RBL1P28749 1068 aa11.87□□□□□ -0.51
CTCFL-221ENST00000608903 WEE1P30291 646 aa11.87□□□□□ -0.51
CTCFL-221ENST00000608903 SLC20A2Q08357 652 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms