RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 TRIM14Q14142 442 aa13.82□□□□□ -0.2
CTSA-213ENST00000606782 FNDC3BQ53EP0 1204 aaKnown RBP13.82□□□□□ -0.2
CTSA-213ENST00000606782 TAC4Q86UU9 113 aa13.82□□□□□ -0.2
CTSA-213ENST00000606782 SLC47A2Q86VL8 602 aa13.82□□□□□ -0.2
CTSA-213ENST00000606782 C1orf216Q8TAB5 229 aa13.82□□□□□ -0.2
CTSA-213ENST00000606782 CYB5D2Q8WUJ1 264 aa13.82□□□□□ -0.2
CTSA-213ENST00000606782 FAM149B1Q96BN6 582 aa13.82□□□□□ -0.2
CTSA-213ENST00000606782 MYO19Q96H55 970 aa13.82□□□□□ -0.2
CTSA-213ENST00000606782 GPR174Q9BXC1 333 aa13.82□□□□□ -0.2
CTSA-213ENST00000606782 ZDHHC5Q9C0B5 715 aa13.82□□□□□ -0.2
CTSA-213ENST00000606782 NUCKS1Q9H1E3 243 aaKnown RBP13.82□□□□□ -0.2
CTSA-213ENST00000606782 PRSS16Q9NQE7 514 aa13.82□□□□□ -0.2
CTSA-213ENST00000606782 SUN2Q9UH99 717 aa13.82□□□□□ -0.2
CTSA-213ENST00000606782 INTS6Q9UL03 887 aaKnown RBP13.82□□□□□ -0.2
CTSA-213ENST00000606782 ADAMTS9Q9P2N4 1935 aa13.82□□□□□ -0.2
CTSA-213ENST00000606782 A0A1B0GTW7 788 aa13.81□□□□□ -0.2
CTSA-213ENST00000606782 LRRC53A6NM62 1247 aa13.81□□□□□ -0.2
CTSA-213ENST00000606782 KCNU1A8MYU2 1149 aa13.81□□□□□ -0.2
CTSA-213ENST00000606782 OPHN1O60890 802 aa13.81□□□□□ -0.2
CTSA-213ENST00000606782 GFPT2O94808 682 aa13.81□□□□□ -0.2
CTSA-213ENST00000606782 TRUB2O95900 331 aaKnown RBP13.81□□□□□ -0.2
CTSA-213ENST00000606782 ASLP04424 464 aa13.81□□□□□ -0.2
CTSA-213ENST00000606782 CCDC172P0C7W6 258 aa13.81□□□□□ -0.2
CTSA-213ENST00000606782 ACADMP11310 421 aa13.81□□□□□ -0.2
CTSA-213ENST00000606782 CD59P13987 128 aa13.81□□□□□ -0.2
CTSA-213ENST00000606782 CYP11B1P15538 503 aa13.81□□□□□ -0.2
CTSA-213ENST00000606782 FERP16591 822 aa13.81□□□□□ -0.2
CTSA-213ENST00000606782 POLR2EP19388 210 aaKnown RBP13.81□□□□□ -0.2
CTSA-213ENST00000606782 ATXN3P54252 364 aaPredicted RBP13.81□□□□□ -0.2
CTSA-213ENST00000606782 RPS24P62847 133 aaKnown RBP13.81□□□□□ -0.2
CTSA-213ENST00000606782 ZNF252P-AS1Q0IIN9 211 aa13.81□□□□□ -0.2
CTSA-213ENST00000606782 DCAF6Q58WW2 860 aa13.81□□□□□ -0.2
CTSA-213ENST00000606782 SFMBT2Q5VUG0 894 aa13.81□□□□□ -0.2
CTSA-213ENST00000606782 TMC6Q7Z403 805 aa13.81□□□□□ -0.2
CTSA-213ENST00000606782 MFN1Q8IWA4 741 aa13.81□□□□□ -0.2
CTSA-213ENST00000606782 RGL4Q8IZJ4 473 aa13.81□□□□□ -0.2
CTSA-213ENST00000606782 MINDY1Q8N5J2 469 aa13.81□□□□□ -0.2
CTSA-213ENST00000606782 DEFB124Q8NES8 71 aa13.81□□□□□ -0.2
CTSA-213ENST00000606782 ADAM32Q8TC27 787 aa13.81□□□□□ -0.2
CTSA-213ENST00000606782 BTN2A3PQ96KV6 586 aa13.81□□□□□ -0.2
CTSA-213ENST00000606782 SLC2A13Q96QE2 648 aa13.81□□□□□ -0.2
CTSA-213ENST00000606782 SLC32A1Q9H598 525 aa13.81□□□□□ -0.2
CTSA-213ENST00000606782 FSCN3Q9NQT6 498 aa13.81□□□□□ -0.2
CTSA-213ENST00000606782 IGF2RP11717 2491 aa13.8□□□□□ -0.2
CTSA-213ENST00000606782 TYW5A2RUC4 315 aaKnown RBP13.8□□□□□ -0.2
CTSA-213ENST00000606782 CAPN9O14815 690 aa13.8□□□□□ -0.2
CTSA-213ENST00000606782 APOEP02649 317 aa13.8□□□□□ -0.2
CTSA-213ENST00000606782 MAOBP27338 520 aa13.8□□□□□ -0.2
CTSA-213ENST00000606782 HNRNPH3P31942 346 aaKnown RBP13.8□□□□□ -0.2
CTSA-213ENST00000606782 KRT9P35527 623 aa13.8□□□□□ -0.2
CTSA-213ENST00000606782 RPS14P62263 151 aaKnown RBP13.8□□□□□ -0.2
CTSA-213ENST00000606782 HNRNPDQ14103 355 aaKnown RBP13.8□□□□□ -0.2
CTSA-213ENST00000606782 TAF5Q15542 800 aa13.8□□□□□ -0.2
CTSA-213ENST00000606782 PLEKHG6Q3KR16 790 aa13.8□□□□□ -0.2
CTSA-213ENST00000606782 ZC3H12AQ5D1E8 599 aaKnown RBP13.8□□□□□ -0.2
CTSA-213ENST00000606782 FSCBQ5H9T9 825 aa13.8□□□□□ -0.2
CTSA-213ENST00000606782 EFHC1Q5JVL4 640 aa13.8□□□□□ -0.2
CTSA-213ENST00000606782 DCAF12L1Q5VU92 463 aa13.8□□□□□ -0.2
CTSA-213ENST00000606782 DRC7Q8IY82 874 aa13.8□□□□□ -0.2
CTSA-213ENST00000606782 HDDC3Q8N4P3 179 aa13.8□□□□□ -0.2
CTSA-213ENST00000606782 OR8K1Q8NGG5 319 aa13.8□□□□□ -0.2
CTSA-213ENST00000606782 PPP1R13BQ96KQ4 1090 aa13.8□□□□□ -0.2
CTSA-213ENST00000606782 MRGPRX3Q96LB0 322 aa13.8□□□□□ -0.2
CTSA-213ENST00000606782 CPXM1Q96SM3 734 aa13.8□□□□□ -0.2
CTSA-213ENST00000606782 PRMT1Q99873 361 aaKnown RBP13.8□□□□□ -0.2
CTSA-213ENST00000606782 RSPH9Q9H1X1 276 aaPredicted RBP13.8□□□□□ -0.2
CTSA-213ENST00000606782 OSGEPQ9NPF4 335 aa13.8□□□□□ -0.2
CTSA-213ENST00000606782 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.8□□□□□ -0.2
CTSA-213ENST00000606782 STIM2Q9P246 746 aa13.8□□□□□ -0.2
CTSA-213ENST00000606782 TJP2Q9UDY2 1190 aa13.8□□□□□ -0.2
CTSA-213ENST00000606782 XPO7Q9UIA9 1087 aaKnown RBP13.8□□□□□ -0.2
CTSA-213ENST00000606782 MEI4A8MW99 385 aa13.79□□□□□ -0.2
CTSA-213ENST00000606782 C10orf142B7Z368 130 aa13.79□□□□□ -0.2
CTSA-213ENST00000606782 HSF2BPO75031 334 aa13.79□□□□□ -0.2
CTSA-213ENST00000606782 LUC7L3O95232 432 aaKnown RBP13.79□□□□□ -0.2
CTSA-213ENST00000606782 SRPRAP08240 638 aaKnown RBP13.79□□□□□ -0.2
CTSA-213ENST00000606782 SLC2A3P11169 496 aa13.79□□□□□ -0.2
CTSA-213ENST00000606782 CHRNB2P17787 502 aa13.79□□□□□ -0.2
CTSA-213ENST00000606782 TACR2P21452 398 aa13.79□□□□□ -0.2
CTSA-213ENST00000606782 CSKP41240 450 aa13.79□□□□□ -0.2
CTSA-213ENST00000606782 PRKCIP41743 596 aa13.79□□□□□ -0.2
CTSA-213ENST00000606782 PLK1P53350 603 aa13.79□□□□□ -0.2
CTSA-213ENST00000606782 PITX1P78337 314 aaPredicted RBP13.79□□□□□ -0.2
CTSA-213ENST00000606782 MTA1Q13330 715 aa13.79□□□□□ -0.2
CTSA-213ENST00000606782 HNRNPA1L2Q32P51 320 aaKnown RBP13.79□□□□□ -0.2
CTSA-213ENST00000606782 NOP9Q86U38 636 aaKnown RBP13.79□□□□□ -0.2
CTSA-213ENST00000606782 ZNF677Q86XU0 584 aa13.79□□□□□ -0.2
CTSA-213ENST00000606782 ZNF366Q8N895 744 aa13.79□□□□□ -0.2
CTSA-213ENST00000606782 EPS8L1Q8TE68 723 aa13.79□□□□□ -0.2
CTSA-213ENST00000606782 DNAJC7Q99615 494 aa13.79□□□□□ -0.2
CTSA-213ENST00000606782 SYT11Q9BT88 431 aa13.79□□□□□ -0.2
CTSA-213ENST00000606782 GTPBP2Q9BX10 602 aaKnown RBP13.79□□□□□ -0.2
CTSA-213ENST00000606782 KIAA1522Q9P206 1035 aaPredicted RBP13.79□□□□□ -0.2
CTSA-213ENST00000606782 IMPACTQ9P2X3 320 aa13.79□□□□□ -0.2
CTSA-213ENST00000606782 NOCTQ9UK39 431 aaKnown RBP13.79□□□□□ -0.2
CTSA-213ENST00000606782 SCML1Q9UN30 329 aa13.79□□□□□ -0.2
CTSA-213ENST00000606782 TARSL2A2RTX5 802 aaKnown RBP13.78□□□□□ -0.2
CTSA-213ENST00000606782 AKR1B15C9JRZ8 316 aaPredicted RBP13.78□□□□□ -0.2
CTSA-213ENST00000606782 BCAT2O15382 392 aaPredicted RBP13.78□□□□□ -0.2
CTSA-213ENST00000606782 TPM1P09493 284 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms