RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 KLK7P49862 253 aa18.69■□□□□ 0.58
CCDC12-208ENST00000603885 OXCT1P55809 520 aa18.69■□□□□ 0.58
CCDC12-208ENST00000603885 POLR2FP61218 127 aaKnown RBP18.69■□□□□ 0.58
CCDC12-208ENST00000603885 ECT2LQ008S8 904 aa18.69■□□□□ 0.58
CCDC12-208ENST00000603885 CCDC183Q5T5S1 534 aa18.69■□□□□ 0.58
CCDC12-208ENST00000603885 FAM102AQ5T9C2 384 aaPredicted RBP18.69■□□□□ 0.58
CCDC12-208ENST00000603885 N4BP2L1Q5TBK1 243 aaPredicted RBP18.69■□□□□ 0.58
CCDC12-208ENST00000603885 DCAF12L1Q5VU92 463 aa18.69■□□□□ 0.58
CCDC12-208ENST00000603885 FBXL22Q6P050 247 aa18.69■□□□□ 0.58
CCDC12-208ENST00000603885 CIR1Q86X95 450 aaPredicted RBP18.69■□□□□ 0.58
CCDC12-208ENST00000603885 ZNF677Q86XU0 584 aa18.69■□□□□ 0.58
CCDC12-208ENST00000603885 XYLT1Q86Y38 959 aa18.69■□□□□ 0.58
CCDC12-208ENST00000603885 NPY6RQ99463 290 aa18.69■□□□□ 0.58
CCDC12-208ENST00000603885 MTG2Q9H4K7 406 aa18.69■□□□□ 0.58
CCDC12-208ENST00000603885 PAXBP1Q9Y5B6 917 aa18.69■□□□□ 0.58
CCDC12-208ENST00000603885 PCDH15Q96QU1 1955 aa18.68■□□□□ 0.58
CCDC12-208ENST00000603885 ASCC3Q8N3C0 2202 aaKnown RBP18.68■□□□□ 0.58
CCDC12-208ENST00000603885 RNASEH1O60930 286 aaKnown RBP18.68■□□□□ 0.58
CCDC12-208ENST00000603885 PAGE1O75459 146 aa18.68■□□□□ 0.58
CCDC12-208ENST00000603885 GFPT2O94808 682 aa18.68■□□□□ 0.58
CCDC12-208ENST00000603885 MMEP08473 750 aa18.68■□□□□ 0.58
CCDC12-208ENST00000603885 PDGFRAP16234 1089 aa18.68■□□□□ 0.58
CCDC12-208ENST00000603885 CSRP1P21291 193 aaKnown RBP18.68■□□□□ 0.58
CCDC12-208ENST00000603885 CTSOP43234 321 aaPredicted RBP18.68■□□□□ 0.58
CCDC12-208ENST00000603885 SULT1E1P49888 294 aa18.68■□□□□ 0.58
CCDC12-208ENST00000603885 COPB1P53618 953 aaKnown RBP18.68■□□□□ 0.58
CCDC12-208ENST00000603885 AUHQ13825 339 aaKnown RBP18.68■□□□□ 0.58
CCDC12-208ENST00000603885 ARID5BQ14865 1188 aa18.68■□□□□ 0.58
CCDC12-208ENST00000603885 BRMS1LQ5PSV4 323 aa18.68■□□□□ 0.58
CCDC12-208ENST00000603885 SH3PXD2AQ5TCZ1 1133 aa18.68■□□□□ 0.58
CCDC12-208ENST00000603885 OTUD1Q5VV17 481 aaPredicted RBP18.68■□□□□ 0.58
CCDC12-208ENST00000603885 SND1Q7KZF4 910 aaKnown RBP eCLIP18.68■□□□□ 0.58
CCDC12-208ENST00000603885 DHX40Q8IX18 779 aaKnown RBP18.68■□□□□ 0.58
CCDC12-208ENST00000603885 APCDD1Q8J025 514 aa18.68■□□□□ 0.58
CCDC12-208ENST00000603885 HDDC3Q8N4P3 179 aa18.68■□□□□ 0.58
CCDC12-208ENST00000603885 SPAG5Q96R06 1193 aa18.68■□□□□ 0.58
CCDC12-208ENST00000603885 MIR1-1HGQ9H1L0 117 aa18.68■□□□□ 0.58
CCDC12-208ENST00000603885 RSPH9Q9H1X1 276 aaPredicted RBP18.68■□□□□ 0.58
CCDC12-208ENST00000603885 WDCPQ9H6R7 721 aa18.68■□□□□ 0.58
CCDC12-208ENST00000603885 PIGVQ9NUD9 493 aa18.68■□□□□ 0.58
CCDC12-208ENST00000603885 TMEM51Q9NW97 253 aa18.68■□□□□ 0.58
CCDC12-208ENST00000603885 VANGL2Q9ULK5 521 aa18.68■□□□□ 0.58
CCDC12-208ENST00000603885 SCML1Q9UN30 329 aa18.68■□□□□ 0.58
CCDC12-208ENST00000603885 HS3ST4Q9Y661 456 aa18.68■□□□□ 0.58
CCDC12-208ENST00000603885 CACNA1EQ15878 2313 aa18.68■□□□□ 0.58
CCDC12-208ENST00000603885 ITIH6Q6UXX5 1313 aa18.68■□□□□ 0.58
CCDC12-208ENST00000603885 TPRP12270 2363 aaKnown RBP18.68■□□□□ 0.58
CCDC12-208ENST00000603885 ADAMTS9Q9P2N4 1935 aa18.67■□□□□ 0.58
CCDC12-208ENST00000603885 EDDM13A0A1B0GTR0 161 aa18.67■□□□□ 0.58
CCDC12-208ENST00000603885 A0A1B0GTW7 788 aa18.67■□□□□ 0.58
CCDC12-208ENST00000603885 FAM170AA1A519 330 aa18.67■□□□□ 0.58
CCDC12-208ENST00000603885 TARSL2A2RTX5 802 aaKnown RBP18.67■□□□□ 0.58
CCDC12-208ENST00000603885 SIN3BO75182 1162 aa18.67■□□□□ 0.58
CCDC12-208ENST00000603885 F9P00740 461 aa18.67■□□□□ 0.58
CCDC12-208ENST00000603885 ACSL1P33121 698 aa18.67■□□□□ 0.58
CCDC12-208ENST00000603885 SOX5P35711 763 aa18.67■□□□□ 0.58
CCDC12-208ENST00000603885 NNMTP40261 264 aa18.67■□□□□ 0.58
CCDC12-208ENST00000603885 CXCR3P49682 368 aa18.67■□□□□ 0.58
CCDC12-208ENST00000603885 NOMO3P69849 1222 aa18.67■□□□□ 0.58
CCDC12-208ENST00000603885 CENPCQ03188 943 aa18.67■□□□□ 0.58
CCDC12-208ENST00000603885 DEUP1Q05D60 604 aa18.67■□□□□ 0.58
CCDC12-208ENST00000603885 SULT2A1Q06520 285 aa18.67■□□□□ 0.58
CCDC12-208ENST00000603885 NAA35Q5VZE5 725 aa18.67■□□□□ 0.58
CCDC12-208ENST00000603885 ZCCHC9Q8N567 271 aaKnown RBP18.67■□□□□ 0.58
CCDC12-208ENST00000603885 MINDY1Q8N5J2 469 aa18.67■□□□□ 0.58
CCDC12-208ENST00000603885 CPA5Q8WXQ8 436 aa18.67■□□□□ 0.58
CCDC12-208ENST00000603885 IGSF8Q969P0 613 aa18.67■□□□□ 0.58
CCDC12-208ENST00000603885 NT5C3BQ969T7 300 aa18.67■□□□□ 0.58
CCDC12-208ENST00000603885 PGAP3Q96FM1 320 aaPredicted RBP18.67■□□□□ 0.58
CCDC12-208ENST00000603885 PCMTD1Q96MG8 357 aaPredicted RBP18.67■□□□□ 0.58
CCDC12-208ENST00000603885 PPP1R9BQ96SB3 815 aa18.67■□□□□ 0.58
CCDC12-208ENST00000603885 BTBD1Q9H0C5 482 aa18.67■□□□□ 0.58
CCDC12-208ENST00000603885 TKTL2Q9H0I9 626 aa18.67■□□□□ 0.58
CCDC12-208ENST00000603885 SIK2Q9H0K1 926 aa18.67■□□□□ 0.58
CCDC12-208ENST00000603885 NLRC4Q9NPP4 1024 aa18.67■□□□□ 0.58
CCDC12-208ENST00000603885 ARHGEF38Q9NXL2 777 aa18.67■□□□□ 0.58
CCDC12-208ENST00000603885 LIMA1Q9UHB6 759 aaKnown RBP18.67■□□□□ 0.58
CCDC12-208ENST00000603885 NOCTQ9UK39 431 aaKnown RBP18.67■□□□□ 0.58
CCDC12-208ENST00000603885 SIK3Q9Y2K2 1263 aa18.67■□□□□ 0.58
CCDC12-208ENST00000603885 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.66■□□□□ 0.58
CCDC12-208ENST00000603885 LGALS16A8MUM7 142 aa18.66■□□□□ 0.58
CCDC12-208ENST00000603885 TTC34A8MYJ7 566 aa18.66■□□□□ 0.58
CCDC12-208ENST00000603885 GOLGA8SH3BPF8 625 aa18.66■□□□□ 0.58
CCDC12-208ENST00000603885 EPHB6O15197 1021 aa18.66■□□□□ 0.58
CCDC12-208ENST00000603885 OPHN1O60890 802 aa18.66■□□□□ 0.58
CCDC12-208ENST00000603885 SEMA4FO95754 770 aa18.66■□□□□ 0.58
CCDC12-208ENST00000603885 CEACAM1P13688 526 aa18.66■□□□□ 0.58
CCDC12-208ENST00000603885 TFE3P19532 575 aaPredicted RBP18.66■□□□□ 0.58
CCDC12-208ENST00000603885 CDK11BP21127 795 aaKnown RBP18.66■□□□□ 0.58
CCDC12-208ENST00000603885 MZF1P28698 734 aaPredicted RBP18.66■□□□□ 0.58
CCDC12-208ENST00000603885 GGCXP38435 758 aa18.66■□□□□ 0.58
CCDC12-208ENST00000603885 PLK1P53350 603 aa18.66■□□□□ 0.58
CCDC12-208ENST00000603885 JAM2P57087 298 aa18.66■□□□□ 0.58
CCDC12-208ENST00000603885 CDR2Q01850 454 aa18.66■□□□□ 0.58
CCDC12-208ENST00000603885 SFSWAPQ12872 951 aaKnown RBP18.66■□□□□ 0.58
CCDC12-208ENST00000603885 ZNF177Q13360 481 aaPredicted RBP18.66■□□□□ 0.58
CCDC12-208ENST00000603885 SYCP1Q15431 976 aa18.66■□□□□ 0.58
CCDC12-208ENST00000603885 SLC25A52Q3SY17 297 aa18.66■□□□□ 0.58
CCDC12-208ENST00000603885 C2CD6Q53TS8 623 aa18.66■□□□□ 0.58
CCDC12-208ENST00000603885 C9orf64Q5T6V5 341 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms