RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 LMLNQ96KR4 655 aa10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 MRGPRX3Q96LB0 322 aa10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 PRICKLE1Q96MT3 831 aaPredicted RBP10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 ZSWIM1Q9BR11 485 aa10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 ORAI3Q9BRQ5 295 aa10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 GTPBP4Q9BZE4 634 aaKnown RBP10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 NUCKS1Q9H1E3 243 aaKnown RBP10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 SERGEFQ9UGK8 458 aa10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 HOOK1Q9UJC3 728 aaKnown RBP10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 TLR6Q9Y2C9 796 aa10.94□□□□□ -0.66
CHMP2A-202ENST00000596708 FASNP49327 2511 aaKnown RBP10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 A0A1B0GTQ1 180 aa10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 EDDM13A0A1B0GTR0 161 aa10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 TARSL2A2RTX5 802 aaKnown RBP10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 LUC7L3O95232 432 aaKnown RBP10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 APOEP02649 317 aa10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 FYNP06241 537 aa10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 SRPRAP08240 638 aaKnown RBP10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 CD38P28907 300 aa10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 NNMTP40261 264 aa10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 CTSOP43234 321 aaPredicted RBP10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 ACADSBP45954 432 aa10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 PSMD8P48556 350 aa10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 NUMBP49757 651 aa10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 ECT2LQ008S8 904 aa10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 DCAF6Q58WW2 860 aa10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 C9orf64Q5T6V5 341 aa10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 RAP1GAP2Q684P5 730 aa10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 ARHGEF19Q8IW93 802 aa10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 APCDD1Q8J025 514 aa10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 STK40Q8N2I9 435 aa10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 PDCD7Q8N8D1 485 aaKnown RBP10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 KDM1BQ8NB78 822 aa10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 EHBP1Q8NDI1 1231 aa10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 OR2T34Q8NGX1 318 aa10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 OR14C36Q8NHC7 312 aa10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 DHTKD1Q96HY7 919 aaPredicted RBP10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 RPL10LQ96L21 214 aaKnown RBP10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 CEP63Q96MT8 703 aa10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 ELF4Q99607 663 aaPredicted RBP10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 EBF2Q9HAK2 575 aa10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 TJP2Q9UDY2 1190 aa10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 SLCO3A1Q9UIG8 710 aa10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 DMXL2Q8TDJ6 3036 aa10.93□□□□□ -0.66
CHMP2A-202ENST00000596708 DOCK4Q8N1I0 1966 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 TBC1D3DA0A087WVF3 549 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 TBC1D3IA0A087WXS9 549 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 TBC1D3EA0A087X179 549 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 TBC1D3KA0A087X1G2 549 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 TBC1D3FA6NER0 549 aaPredicted RBP10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 TBC1D3LB9A6J9 549 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 ENC1O14682 589 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 PMM2O15305 246 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 P4HA2O15460 535 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 PAPSS1O43252 624 aaPredicted RBP10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 SART1O43290 800 aaKnown RBP10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 LDOC1O95751 146 aaPredicted RBP10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 IL1BP01584 269 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 WNT1P04628 370 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 TBC1D3HP0C7X1 549 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 KRT5P13647 590 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 JUPP14923 745 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 TACR2P21452 398 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 GPD2P43304 727 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 NNTQ13423 1086 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 CAMK2BQ13554 666 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 SMAD1Q15797 465 aaKnown RBP10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 SOWAHCQ53LP3 525 aaPredicted RBP10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 SLC45A4Q5BKX6 768 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 ZC3H12AQ5D1E8 599 aaKnown RBP10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 SYPL2Q5VXT5 272 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 TBC1D3GQ6DHY5 549 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 TBC1D3CQ6IPX1 549 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 KLHL10Q6JEL2 608 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 TAC4Q86UU9 113 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 CHSY1Q86X52 802 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 TBC1D3Q8IZP1 549 aaPredicted RBP10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 ATP6V0D2Q8N8Y2 350 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 LMO3Q8TAP4 145 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 PTPRN2Q92932 1015 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 SLC39A13Q96H72 371 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 CNDP2Q96KP4 475 aaKnown RBP10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 FAM129BQ96TA1 746 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 GDF3Q9NR23 364 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 DKK4Q9UBT3 224 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 ADAMTS1Q9UHI8 967 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 SLC12A6Q9UHW9 1150 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 XPO7Q9UIA9 1087 aaKnown RBP10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 FZD4Q9ULV1 537 aa10.92□□□□□ -0.66
CHMP2A-202ENST00000596708 ITIH6Q6UXX5 1313 aa10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 EIF4E1BA6NMX2 242 aaKnown RBP10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 F5H5T6 163 aa10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 CBX4O00257 560 aa10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 PLK4O00444 970 aa10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 MED7O43513 233 aa10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 TRUB2O95900 331 aaKnown RBP10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 ADH1BP00325 375 aa10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 GOT1P17174 413 aa10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 C5AR1P21730 350 aa10.91□□□□□ -0.66
CHMP2A-202ENST00000596708 PPP1R2P41236 205 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms