RNA–Protein interactions for RNA: ENST00000586441.1

ERCC2-207, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 682 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-207ENST00000586441 HLA-FP30511 346 aa12.8□□□□□ -0.36
ERCC2-207ENST00000586441 NOS2P35228 1153 aa12.8□□□□□ -0.36
ERCC2-207ENST00000586441 JAM2P57087 298 aa12.8□□□□□ -0.36
ERCC2-207ENST00000586441 SLC6A3Q01959 620 aa12.8□□□□□ -0.36
ERCC2-207ENST00000586441 DCAF6Q58WW2 860 aa12.8□□□□□ -0.36
ERCC2-207ENST00000586441 MS4A13Q5J8X5 152 aa12.8□□□□□ -0.36
ERCC2-207ENST00000586441 OLFML1Q6UWY5 402 aa12.8□□□□□ -0.36
ERCC2-207ENST00000586441 IRF2BP2Q7Z5L9 587 aa12.8□□□□□ -0.36
ERCC2-207ENST00000586441 PGBD3Q8N328 593 aa12.8□□□□□ -0.36
ERCC2-207ENST00000586441 ATP6V0D2Q8N8Y2 350 aa12.8□□□□□ -0.36
ERCC2-207ENST00000586441 NT5C3BQ969T7 300 aa12.8□□□□□ -0.36
ERCC2-207ENST00000586441 MRGPRX1Q96LB2 322 aa12.8□□□□□ -0.36
ERCC2-207ENST00000586441 LACRTQ9GZZ8 138 aa12.8□□□□□ -0.36
ERCC2-207ENST00000586441 TMEM245Q9H330 911 aa12.8□□□□□ -0.36
ERCC2-207ENST00000586441 AJAP1Q9UKB5 411 aaPredicted RBP12.8□□□□□ -0.36
ERCC2-207ENST00000586441 CLEC4EQ9ULY5 219 aa12.8□□□□□ -0.36
ERCC2-207ENST00000586441 PI4KAP42356 2102 aa12.8□□□□□ -0.36
ERCC2-207ENST00000586441 BTNL10A8MVZ5 291 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 KCNU1A8MYU2 1149 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 F8VZ95 297 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 MAP3K13O43283 966 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 SYNCRIPO60506 623 aaKnown RBP12.79□□□□□ -0.36
ERCC2-207ENST00000586441 TSPAN3O60637 253 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 F9P00740 461 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 IGLV3-19P01714 112 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 ASLP04424 464 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 DLDP09622 509 aaKnown RBP12.79□□□□□ -0.36
ERCC2-207ENST00000586441 PABPC1P11940 636 aaKnown RBP12.79□□□□□ -0.36
ERCC2-207ENST00000586441 SLC6A4P31645 630 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 CCR1P32246 355 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 SOX5P35711 763 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 MATKP42679 507 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 OXCT1P55809 520 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 ARID5AQ03989 594 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 CKAP4Q07065 602 aaKnown RBP12.79□□□□□ -0.36
ERCC2-207ENST00000586441 CAMK2GQ13555 558 aaPredicted RBP12.79□□□□□ -0.36
ERCC2-207ENST00000586441 SLC12A1Q13621 1099 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 ZNF234Q14588 700 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 IFI16Q16666 785 aaKnown RBP12.79□□□□□ -0.36
ERCC2-207ENST00000586441 TTC39BQ5VTQ0 682 aaPredicted RBP12.79□□□□□ -0.36
ERCC2-207ENST00000586441 PEAR1Q5VY43 1037 aaPredicted RBP12.79□□□□□ -0.36
ERCC2-207ENST00000586441 PAPD7Q5XG87 772 aaKnown RBP12.79□□□□□ -0.36
ERCC2-207ENST00000586441 TMEM215Q68D42 235 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 NADSYN1Q6IA69 706 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 KIAA1211LQ6NV74 962 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 DGLUCYQ7Z3D6 616 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 RABEPKQ7Z6M1 372 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 TAC4Q86UU9 113 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 ADIPOR2Q86V24 386 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 CCDC117Q8IWD4 279 aaPredicted RBP12.79□□□□□ -0.36
ERCC2-207ENST00000586441 C12orf50Q8NA57 414 aaPredicted RBP12.79□□□□□ -0.36
ERCC2-207ENST00000586441 MSANTD4Q8NCY6 345 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 TTC17Q96AE7 1141 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 C18orf8Q96DM3 657 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 PGAP3Q96FM1 320 aaPredicted RBP12.79□□□□□ -0.36
ERCC2-207ENST00000586441 LMLNQ96KR4 655 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.79□□□□□ -0.36
ERCC2-207ENST00000586441 SYNCQ9H7C4 482 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 ITM2CQ9NQX7 267 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 CACNA2D2Q9NY47 1150 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 SUN2Q9UH99 717 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 EVLQ9UI08 416 aaPredicted RBP12.79□□□□□ -0.36
ERCC2-207ENST00000586441 GGA2Q9UJY4 613 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 JRKLQ9Y4A0 524 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.79□□□□□ -0.36
ERCC2-207ENST00000586441 CEP192Q8TEP8 1941 aa12.79□□□□□ -0.36
ERCC2-207ENST00000586441 RCCD1A6NED2 376 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 WASH3PC4AMC7 463 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 RRP9O43818 475 aaKnown RBP12.78□□□□□ -0.36
ERCC2-207ENST00000586441 TBL1XO60907 577 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 POLR2EP19388 210 aaKnown RBP12.78□□□□□ -0.36
ERCC2-207ENST00000586441 NDUFV2P19404 249 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 ABCB4P21439 1286 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 BCKDHBP21953 392 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 OXTRP30559 389 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 IL12RB1P42701 662 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 ATXN1P54253 815 aaKnown RBP12.78□□□□□ -0.36
ERCC2-207ENST00000586441 CREB5Q02930 508 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 ZBTB16Q05516 673 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 GFPT1Q06210 699 aaPredicted RBP12.78□□□□□ -0.36
ERCC2-207ENST00000586441 FUT11Q495W5 492 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 PTPN20Q4JDL3 420 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 RFWD3Q6PCD5 774 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 SERPINA13PQ6UXR4 307 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 CHST9Q7L1S5 443 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 SYT12Q8IV01 421 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 DEFB106AQ8N104 65 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 EPS8L1Q8TE68 723 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 TSC1Q92574 1164 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 CIPCQ9C0C6 399 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 PCED1AQ9H1Q7 454 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 PDCL3Q9H2J4 239 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 PRDM16Q9HAZ2 1276 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 ZDHHC4Q9NPG8 344 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 ABCB8Q9NUT2 735 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 ARGLU1Q9NWB6 273 aaPredicted RBP12.78□□□□□ -0.36
ERCC2-207ENST00000586441 CALCOCO1Q9P1Z2 691 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 USP36Q9P275 1121 aaKnown RBP12.78□□□□□ -0.36
ERCC2-207ENST00000586441 TJP2Q9UDY2 1190 aa12.78□□□□□ -0.36
ERCC2-207ENST00000586441 TRIM10Q9UDY6 481 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms