RNA–Protein interactions for RNA: ENST00000568191.1

VPS35-207, Transcript of VPS35, retromer complex component, humanhuman

TSL 4

Gene VPS35, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35-207ENST00000568191 ANO9A1A5B4 782 aa3.23□□□□□ -1.89
VPS35-207ENST00000568191 M0QZQ0 153 aa3.23□□□□□ -1.89
VPS35-207ENST00000568191 PMM2O15305 246 aa3.23□□□□□ -1.89
VPS35-207ENST00000568191 TAF5LO75529 589 aa3.23□□□□□ -1.89
VPS35-207ENST00000568191 LARGE1O95461 756 aa3.23□□□□□ -1.89
VPS35-207ENST00000568191 FGF3P11487 239 aaPredicted RBP3.23□□□□□ -1.89
VPS35-207ENST00000568191 SLC5A1P13866 664 aa3.23□□□□□ -1.89
VPS35-207ENST00000568191 HOXD3P31249 432 aaPredicted RBP3.23□□□□□ -1.89
VPS35-207ENST00000568191 ARRB2P32121 409 aa3.23□□□□□ -1.89
VPS35-207ENST00000568191 SLC16A2P36021 539 aa3.23□□□□□ -1.89
VPS35-207ENST00000568191 RASSF2P50749 326 aa3.23□□□□□ -1.89
VPS35-207ENST00000568191 OAZ1P54368 228 aa3.23□□□□□ -1.89
VPS35-207ENST00000568191 RBM6P78332 1123 aaKnown RBP3.23□□□□□ -1.89
VPS35-207ENST00000568191 BTKQ06187 659 aa3.23□□□□□ -1.89
VPS35-207ENST00000568191 PICALMQ13492 652 aa3.23□□□□□ -1.89
VPS35-207ENST00000568191 NFATC4Q14934 902 aa3.23□□□□□ -1.89
VPS35-207ENST00000568191 SLC35G1Q2M3R5 365 aa3.23□□□□□ -1.89
VPS35-207ENST00000568191 KIAA1755Q5JYT7 1200 aa3.23□□□□□ -1.89
VPS35-207ENST00000568191 Q6ZTK2 550 aa3.23□□□□□ -1.89
VPS35-207ENST00000568191 GATAD2AQ86YP4 633 aa3.23□□□□□ -1.89
VPS35-207ENST00000568191 KLBQ86Z14 1044 aa3.23□□□□□ -1.89
VPS35-207ENST00000568191 DPP10Q8N608 796 aa3.23□□□□□ -1.89
VPS35-207ENST00000568191 ZNF419Q96HQ0 510 aaPredicted RBP3.23□□□□□ -1.89
VPS35-207ENST00000568191 ADAD1Q96M93 576 aaKnown RBP3.23□□□□□ -1.89
VPS35-207ENST00000568191 RIPOR3Q96MK2 946 aa3.23□□□□□ -1.89
VPS35-207ENST00000568191 EPS8L2Q9H6S3 715 aa3.23□□□□□ -1.89
VPS35-207ENST00000568191 CERS4Q9HA82 394 aa3.23□□□□□ -1.89
VPS35-207ENST00000568191 TXLNGQ9NUQ3 528 aa3.23□□□□□ -1.89
VPS35-207ENST00000568191 SLC52A1Q9NWF4 448 aa3.23□□□□□ -1.89
VPS35-207ENST00000568191 SLC12A4Q9UP95 1085 aa3.23□□□□□ -1.89
VPS35-207ENST00000568191 RASA4BC9J798 803 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 GTPBP1O00178 669 aaKnown RBP3.22□□□□□ -1.89
VPS35-207ENST00000568191 RASA4O43374 803 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 CAND2O75155 1236 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 CER1O95813 267 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 KRT18P05783 430 aaKnown RBP3.22□□□□□ -1.89
VPS35-207ENST00000568191 PRSS2P07478 247 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 ANXA6P08133 673 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 MYL3P08590 195 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 CYP3A4P08684 503 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 ARSBP15848 533 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 PCP4P48539 62 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 AK2P54819 239 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 TAS2R50P59544 299 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 SHC2P98077 582 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 GPR18Q14330 331 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 RAB30Q15771 203 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 LONRF1Q17RB8 773 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 TBRG1Q3YBR2 411 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 DNTTIP2Q5QJE6 756 aaKnown RBP3.22□□□□□ -1.89
VPS35-207ENST00000568191 ZNF324BQ6AW86 544 aaPredicted RBP3.22□□□□□ -1.89
VPS35-207ENST00000568191 TTLL5Q6EMB2 1281 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 NADSYN1Q6IA69 706 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 KSR2Q6VAB6 950 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 SLC16A12Q6ZSM3 486 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 KDELC2Q7Z4H8 507 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 ANKS1BQ7Z6G8 1248 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 SLC25A41Q8N5S1 370 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 GABPB2Q8TAK5 448 aaPredicted RBP3.22□□□□□ -1.89
VPS35-207ENST00000568191 NEUROG1Q92886 237 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 MUL1Q969V5 352 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 MIB2Q96AX9 1013 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 ZNF333Q96JL9 665 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 FAM84BQ96KN1 310 aaPredicted RBP3.22□□□□□ -1.89
VPS35-207ENST00000568191 CAMK1GQ96NX5 476 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 PRPF18Q99633 342 aaKnown RBP3.22□□□□□ -1.89
VPS35-207ENST00000568191 GDF15Q99988 308 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 NAA15Q9BXJ9 866 aaKnown RBP3.22□□□□□ -1.89
VPS35-207ENST00000568191 TM6SF1Q9BZW5 370 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 DCLK3Q9C098 648 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 OSBPL5Q9H0X9 879 aaPredicted RBP3.22□□□□□ -1.89
VPS35-207ENST00000568191 SPAG4Q9NPE6 437 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 CHPF2Q9P2E5 772 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 SLC39A10Q9ULF5 831 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 FZD10Q9ULW2 581 aa3.22□□□□□ -1.89
VPS35-207ENST00000568191 CYP3A7-CYP3A51PA0A087WV96 503 aa3.21□□□□□ -1.9
VPS35-207ENST00000568191 DENND3A2RUS2 1198 aa3.21□□□□□ -1.9
VPS35-207ENST00000568191 TMEM247A6NEH6 219 aa3.21□□□□□ -1.9
VPS35-207ENST00000568191 EFCAB8A8MWE9 144 aa3.21□□□□□ -1.9
VPS35-207ENST00000568191 KCNJ18B7U540 433 aa3.21□□□□□ -1.9
VPS35-207ENST00000568191 MCIDASD6RGH6 385 aa3.21□□□□□ -1.9
VPS35-207ENST00000568191 APAF1O14727 1248 aa3.21□□□□□ -1.9
VPS35-207ENST00000568191 SPRY3O43610 288 aa3.21□□□□□ -1.9
VPS35-207ENST00000568191 HLA-DQA2P01906 255 aa3.21□□□□□ -1.9
VPS35-207ENST00000568191 WNT1P04628 370 aa3.21□□□□□ -1.9
VPS35-207ENST00000568191 NPPBP16860 134 aa3.21□□□□□ -1.9
VPS35-207ENST00000568191 IGFBP2P18065 325 aa3.21□□□□□ -1.9
VPS35-207ENST00000568191 CYP3A7P24462 503 aa3.21□□□□□ -1.9
VPS35-207ENST00000568191 MT3P25713 68 aa3.21□□□□□ -1.9
VPS35-207ENST00000568191 AKT1P31749 480 aa3.21□□□□□ -1.9
VPS35-207ENST00000568191 HSPA7P48741 367 aa3.21□□□□□ -1.9
VPS35-207ENST00000568191 ADPRHP54922 357 aa3.21□□□□□ -1.9
VPS35-207ENST00000568191 POLE2P56282 527 aa3.21□□□□□ -1.9
VPS35-207ENST00000568191 RNASELQ05823 741 aaKnown RBP3.21□□□□□ -1.9
VPS35-207ENST00000568191 KEAP1Q14145 624 aa3.21□□□□□ -1.9
VPS35-207ENST00000568191 SLC4A8Q2Y0W8 1093 aa3.21□□□□□ -1.9
VPS35-207ENST00000568191 DGKKQ5KSL6 1271 aa3.21□□□□□ -1.9
VPS35-207ENST00000568191 ATPAF1Q5TC12 328 aaPredicted RBP3.21□□□□□ -1.9
VPS35-207ENST00000568191 AAGABQ6PD74 315 aa3.21□□□□□ -1.9
VPS35-207ENST00000568191 DLK2Q6UY11 383 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms