RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 TBC1D31Q96DN5 1066 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 CLIC5Q9NZA1 410 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 ALPK3Q96L96 1907 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 ZNF840PA6NDX5 716 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 HACD1B0YJ81 288 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 COCHO43405 550 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 CAPN2P17655 700 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 ELF1P32519 619 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 CD68P34810 354 aaPredicted RBP11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 SESN2P58004 480 aaPredicted RBP11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 TMED2Q15363 201 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 TMEM240Q5SV17 173 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 MANEALQ5VSG8 457 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 NADSYN1Q6IA69 706 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 MSANTD2Q6P1R3 559 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 KDELC2Q7Z4H8 507 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 C2orf15Q8WU43 125 aaKnown RBP11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 SLC22A12Q96S37 553 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 SELENOSQ9BQE4 189 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 GORASP1Q9BQQ3 440 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 TRPC7Q9HCX4 862 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 MLXIPLQ9NP71 852 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 IL1RAPL1Q9NZN1 696 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 PCDHB12Q9Y5F1 795 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 MAD1L1Q9Y6D9 718 aa11.16□□□□□ -0.62
SNRPA1-211ENST00000560433 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.15□□□□□ -0.62
SNRPA1-211ENST00000560433 TTC24A2A3L6 582 aaPredicted RBP11.15□□□□□ -0.62
SNRPA1-211ENST00000560433 NRG2O14511 850 aaPredicted RBP11.15□□□□□ -0.62
SNRPA1-211ENST00000560433 TGM5O43548 720 aa11.15□□□□□ -0.62
SNRPA1-211ENST00000560433 ZDHHC11BP0C7U3 371 aa11.15□□□□□ -0.62
SNRPA1-211ENST00000560433 GJA1P17302 382 aa11.15□□□□□ -0.62
SNRPA1-211ENST00000560433 SERPINB6P35237 376 aa11.15□□□□□ -0.62
SNRPA1-211ENST00000560433 ATP5C1P36542 298 aaKnown RBP11.15□□□□□ -0.62
SNRPA1-211ENST00000560433 ERVFC1P60507 584 aa11.15□□□□□ -0.62
SNRPA1-211ENST00000560433 GNGT1P63211 74 aa11.15□□□□□ -0.62
SNRPA1-211ENST00000560433 PPIDQ08752 370 aaKnown RBP11.15□□□□□ -0.62
SNRPA1-211ENST00000560433 GALNT2Q10471 571 aa11.15□□□□□ -0.62
SNRPA1-211ENST00000560433 C6orf118Q5T5N4 469 aa11.15□□□□□ -0.62
SNRPA1-211ENST00000560433 PDZD4Q76G19 769 aaPredicted RBP11.15□□□□□ -0.62
SNRPA1-211ENST00000560433 DNAJB7Q7Z6W7 309 aaPredicted RBP11.15□□□□□ -0.62
SNRPA1-211ENST00000560433 PRPF39Q86UA1 669 aaKnown RBP11.15□□□□□ -0.62
SNRPA1-211ENST00000560433 EXOC3L1Q86VI1 746 aa11.15□□□□□ -0.62
SNRPA1-211ENST00000560433 RELL1Q8IUW5 271 aa11.15□□□□□ -0.62
SNRPA1-211ENST00000560433 DENND1CQ8IV53 801 aa11.15□□□□□ -0.62
SNRPA1-211ENST00000560433 UNC5BQ8IZJ1 945 aa11.15□□□□□ -0.62
SNRPA1-211ENST00000560433 RPRD1AQ96P16 312 aaPredicted RBP11.15□□□□□ -0.62
SNRPA1-211ENST00000560433 HERC2P3Q9BVR0 1158 aa11.15□□□□□ -0.62
SNRPA1-211ENST00000560433 UBE2OQ9C0C9 1292 aaKnown RBP11.15□□□□□ -0.62
SNRPA1-211ENST00000560433 KIF9Q9HAQ2 790 aa11.15□□□□□ -0.62
SNRPA1-211ENST00000560433 NYNRINQ9P2P1 1898 aaKnown RBP11.15□□□□□ -0.62
SNRPA1-211ENST00000560433 A0A087WUV0 522 aaPredicted RBP11.15□□□□□ -0.63
SNRPA1-211ENST00000560433 HIDE1A8MVS5 230 aa11.15□□□□□ -0.63
SNRPA1-211ENST00000560433 GRXCR1A8MXD5 290 aa11.15□□□□□ -0.63
SNRPA1-211ENST00000560433 E7ESA3 106 aa11.15□□□□□ -0.63
SNRPA1-211ENST00000560433 BAIAP3O94812 1187 aa11.15□□□□□ -0.63
SNRPA1-211ENST00000560433 ARHGEF15O94989 841 aa11.15□□□□□ -0.63
SNRPA1-211ENST00000560433 NFKB1P19838 968 aa11.15□□□□□ -0.63
SNRPA1-211ENST00000560433 PAPOLAP51003 745 aaKnown RBP11.15□□□□□ -0.63
SNRPA1-211ENST00000560433 TRIP4Q15650 581 aaPredicted RBP11.15□□□□□ -0.63
SNRPA1-211ENST00000560433 CASC4Q6P4E1 433 aa11.15□□□□□ -0.63
SNRPA1-211ENST00000560433 CES3Q6UWW8 571 aa11.15□□□□□ -0.63
SNRPA1-211ENST00000560433 UBE2Q1Q7Z7E8 422 aa11.15□□□□□ -0.63
SNRPA1-211ENST00000560433 CHSY1Q86X52 802 aa11.15□□□□□ -0.63
SNRPA1-211ENST00000560433 SPATA22Q8NHS9 363 aa11.15□□□□□ -0.63
SNRPA1-211ENST00000560433 BHMTQ93088 406 aa11.15□□□□□ -0.63
SNRPA1-211ENST00000560433 EXOC4Q96A65 974 aa11.15□□□□□ -0.63
SNRPA1-211ENST00000560433 TLCD1Q96CP7 247 aa11.15□□□□□ -0.63
SNRPA1-211ENST00000560433 HDAC11Q96DB2 347 aa11.15□□□□□ -0.63
SNRPA1-211ENST00000560433 XPO6Q96QU8 1125 aaKnown RBP11.15□□□□□ -0.63
SNRPA1-211ENST00000560433 CAPS2Q9BXY5 557 aa11.15□□□□□ -0.63
SNRPA1-211ENST00000560433 NOL6Q9H6R4 1146 aaKnown RBP11.15□□□□□ -0.63
SNRPA1-211ENST00000560433 CATSPERBQ9H7T0 1116 aa11.15□□□□□ -0.63
SNRPA1-211ENST00000560433 ZNF334Q9HCZ1 680 aaPredicted RBP11.15□□□□□ -0.63
SNRPA1-211ENST00000560433 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.15□□□□□ -0.63
SNRPA1-211ENST00000560433 RABGEF1Q9UJ41 708 aa11.15□□□□□ -0.63
SNRPA1-211ENST00000560433 TEX264Q9Y6I9 313 aa11.15□□□□□ -0.63
SNRPA1-211ENST00000560433 PLXNA4Q9HCM2 1894 aa11.14□□□□□ -0.63
SNRPA1-211ENST00000560433 CCDC78A2IDD5 438 aa11.14□□□□□ -0.63
SNRPA1-211ENST00000560433 J3KR12 359 aa11.14□□□□□ -0.63
SNRPA1-211ENST00000560433 TLL1O43897 1013 aa11.14□□□□□ -0.63
SNRPA1-211ENST00000560433 FAM155BO75949 473 aa11.14□□□□□ -0.63
SNRPA1-211ENST00000560433 STK10O94804 968 aaKnown RBP11.14□□□□□ -0.63
SNRPA1-211ENST00000560433 CXCL14O95715 111 aa11.14□□□□□ -0.63
SNRPA1-211ENST00000560433 MT-CYBP00156 380 aaPredicted RBP11.14□□□□□ -0.63
SNRPA1-211ENST00000560433 F7P08709 466 aaPredicted RBP11.14□□□□□ -0.63
SNRPA1-211ENST00000560433 DNAJB1P25685 340 aa11.14□□□□□ -0.63
SNRPA1-211ENST00000560433 SLC6A4P31645 630 aa11.14□□□□□ -0.63
SNRPA1-211ENST00000560433 PSEN1P49768 467 aa11.14□□□□□ -0.63
SNRPA1-211ENST00000560433 PPP2R2AP63151 447 aa11.14□□□□□ -0.63
SNRPA1-211ENST00000560433 SEMA5AQ13591 1074 aa11.14□□□□□ -0.63
SNRPA1-211ENST00000560433 RAB33AQ14088 237 aa11.14□□□□□ -0.63
SNRPA1-211ENST00000560433 AGBL2Q5U5Z8 902 aa11.14□□□□□ -0.63
SNRPA1-211ENST00000560433 PLPP4Q5VZY2 271 aa11.14□□□□□ -0.63
SNRPA1-211ENST00000560433 TXNDC8Q6A555 127 aa11.14□□□□□ -0.63
SNRPA1-211ENST00000560433 SRRM1Q8IYB3 904 aaKnown RBP11.14□□□□□ -0.63
SNRPA1-211ENST00000560433 ATPAF2Q8N5M1 289 aa11.14□□□□□ -0.63
SNRPA1-211ENST00000560433 CNTD1Q8N815 330 aa11.14□□□□□ -0.63
SNRPA1-211ENST00000560433 ATP6V0D2Q8N8Y2 350 aa11.14□□□□□ -0.63
SNRPA1-211ENST00000560433 MGARPQ8TDB4 240 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms