RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 VANGL2Q9ULK5 521 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 A0A087X1B8 175 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 M0QYT0 321 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 POLRMTO00411 1230 aaKnown RBP14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 BHLHB9Q6PI77 547 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 ZNF554Q86TJ5 538 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 REXO1L1PQ8IX06 675 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 ZHX1-C8orf76Q96EF9 292 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 HPDLQ96IR7 371 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 CCDC86Q9H6F5 360 aaKnown RBP14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 NECTIN3Q9NQS3 549 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 SLC24A2Q9UI40 661 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 ZNF221Q9UK13 617 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 ACOT9Q9Y305 439 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 SGTAO43765 313 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 KRT36O76013 467 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 RPL4P36578 427 aaKnown RBP14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 PIK3CGP48736 1102 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 UGT2B15P54855 530 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 SNIP1Q8TAD8 396 aaKnown RBP14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 FATE1Q969F0 183 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 THAP1Q9NVV9 213 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 NCKAP1Q9Y2A7 1128 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 NPHP3-ACAD11A0A0J9YXS1 232 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 SNAP91O60641 907 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 DGAT1O75907 488 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 BMP7P18075 431 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 GSTT1P30711 240 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 OXCT1P55809 520 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 TUBA3CQ13748 450 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 BPIFB6Q8NFQ5 453 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 TEX47Q8TBZ9 253 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 C1QTNF7Q9BXJ2 289 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 RSPH9Q9H1X1 276 aaPredicted RBP14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 MORF4L1Q9UBU8 362 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 BGNP21810 368 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 RFC5P40937 340 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 USP46P62068 366 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 OR2L5Q8NG80 312 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 REXO5Q96IC2 774 aaKnown RBP14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 CHP1Q99653 195 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 NMRAL1Q9HBL8 299 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 DMTF1Q9Y222 760 aa14.1□□□□□ -0.15
CSPG4P12-202ENST00000559989 ERI2A8K979 691 aaKnown RBP14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 CYP27B1O15528 508 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 RENBPP51606 427 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 MPP3Q13368 585 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 CBWD3Q5JTY5 395 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 CBWD5Q5RIA9 395 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 NOTUMQ6P988 496 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 SLFN11Q7Z7L1 901 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 GMPPBQ9Y5P6 360 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 FLT1P17948 1338 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 RSL1D1O76021 490 aaKnown RBP14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 UPP2O95045 317 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 FGFR2P21802 821 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 PAGE2BQ5JRK9 111 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 FAM131AQ6UXB0 335 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 KCNIP3Q9Y2W7 256 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 MAST1Q9Y2H9 1570 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 MCIDASD6RGH6 385 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 FCHO1O14526 889 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 NOS1APO75052 506 aaPredicted RBP14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 AMPD2Q01433 879 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 IL18Q14116 193 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 ZBTB6Q15916 424 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 FBXO39Q8N4B4 442 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 PUS3Q9BZE2 481 aaKnown RBP14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 GPN3Q9UHW5 284 aaPredicted RBP14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 SIN3BO75182 1162 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 METTL18O95568 372 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 FGFR3P22607 806 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 GPSM2P81274 684 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 MKRN4PQ13434 485 aaPredicted RBP14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 ATF7IP2Q5U623 682 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 PRR23BQ6ZRT6 265 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 ZNF540Q8NDQ6 660 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 SYN2Q92777 582 aaPredicted RBP14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 COG5Q9UP83 839 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 OR56A5P0C7T3 313 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 S100A3P33764 101 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 POLD2P49005 469 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 PPP2R2BQ00005 443 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 CDKL1Q00532 357 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 MAPK7Q13164 816 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 GRPEL2Q8TAA5 225 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 DBTP11182 482 aaKnown RBP14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 PHKG2P15735 406 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 IL6STP40189 918 aaPredicted RBP14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 PDIA5Q14554 519 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 SPANXN3Q5MJ09 141 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 PIK3R6Q5UE93 754 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 GMCL1Q96IK5 515 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 ERMAPQ96PL5 475 aaPredicted RBP14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 RUSC1Q9BVN2 902 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 PSME2Q9UL46 239 aa14.09□□□□□ -0.15
CSPG4P12-202ENST00000559989 STXBP1P61764 594 aaKnown RBP14.08□□□□□ -0.15
CSPG4P12-202ENST00000559989 XIAPP98170 497 aa14.08□□□□□ -0.15
CSPG4P12-202ENST00000559989 TMEM159Q96B96 161 aa14.08□□□□□ -0.15
CSPG4P12-202ENST00000559989 MARCH7Q9H992 704 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms