RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 ARL13BQ3SXY8 428 aa9.31□□□□□ -0.92
SNRPA1-208ENST00000559686 ZNF542PQ5EBM4 170 aa9.31□□□□□ -0.92
SNRPA1-208ENST00000559686 SPOPLQ6IQ16 392 aa9.31□□□□□ -0.92
SNRPA1-208ENST00000559686 NELFCDQ8IXH7 590 aa9.31□□□□□ -0.92
SNRPA1-208ENST00000559686 STK40Q8N2I9 435 aa9.31□□□□□ -0.92
SNRPA1-208ENST00000559686 NDRG1Q92597 394 aaKnown RBP9.31□□□□□ -0.92
SNRPA1-208ENST00000559686 KLK6Q92876 244 aa9.31□□□□□ -0.92
SNRPA1-208ENST00000559686 TMA16Q96EY4 203 aaKnown RBP9.31□□□□□ -0.92
SNRPA1-208ENST00000559686 TWNKQ96RR1 684 aa9.31□□□□□ -0.92
SNRPA1-208ENST00000559686 CALN1Q9BXU9 219 aa9.31□□□□□ -0.92
SNRPA1-208ENST00000559686 KIAA1586Q9HCI6 787 aa9.31□□□□□ -0.92
SNRPA1-208ENST00000559686 STK17AQ9UEE5 414 aa9.31□□□□□ -0.92
SNRPA1-208ENST00000559686 CCDC39Q9UFE4 941 aa9.31□□□□□ -0.92
SNRPA1-208ENST00000559686 SCML1Q9UN30 329 aa9.31□□□□□ -0.92
SNRPA1-208ENST00000559686 SRPK3Q9UPE1 567 aa9.31□□□□□ -0.92
SNRPA1-208ENST00000559686 KIF3AQ9Y496 699 aa9.31□□□□□ -0.92
SNRPA1-208ENST00000559686 ENTPD2Q9Y5L3 495 aa9.31□□□□□ -0.92
SNRPA1-208ENST00000559686 COL27A1Q8IZC6 1860 aaPredicted RBP9.31□□□□□ -0.92
SNRPA1-208ENST00000559686 DOCK9Q9BZ29 2069 aa9.31□□□□□ -0.92
SNRPA1-208ENST00000559686 NBPF19A0A087WUL8 3843 aa9.31□□□□□ -0.92
SNRPA1-208ENST00000559686 ARID1BQ8NFD5 2236 aaPredicted RBP9.31□□□□□ -0.92
SNRPA1-208ENST00000559686 GOLGA6L7A0A1B0GV03 622 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 BLACEA4D250 179 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 TTC34A8MYJ7 566 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 RTN2O75298 545 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 NEBLO76041 1014 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 GJB6O95452 261 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 IL1BP01584 269 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 CKMT1AP12532 417 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 GOT1P17174 413 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 HOXD13P35453 343 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 CSKP41240 450 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 CTSOP43234 321 aaPredicted RBP9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 HARS2P49590 506 aaKnown RBP9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 YWHAGP61981 247 aaKnown RBP eCLIP9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 CYP4F2P78329 520 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 NCOA4Q13772 614 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 CDKN3Q16667 212 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 SKIDA1Q1XH10 827 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 KMT5BQ4FZB7 885 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 RFWD3Q6PCD5 774 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 CCDC186Q7Z3E2 898 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 LAPTM4BQ86VI4 370 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 JAMLQ86YT9 394 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 PLEKHO2Q8TD55 490 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 SGF29Q96ES7 293 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 KLHDC7BQ96G42 594 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 MYO19Q96H55 970 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 PRR11Q96HE9 360 aaPredicted RBP9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 CDK5RAP1Q96SZ6 601 aaKnown RBP9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 FZD3Q9NPG1 666 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 CLIC5Q9NZA1 410 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 SFMBT1Q9UHJ3 866 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 FZD4Q9ULV1 537 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 CEP83Q9Y592 693 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 UBE4BO95155 1302 aa9.3□□□□□ -0.92
SNRPA1-208ENST00000559686 CDRT15L2A8MXV6 281 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 SLC31A1O15431 190 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 MSI1O43347 362 aaKnown RBP9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 STX6O43752 255 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 MAGEC1O60732 1142 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 VNN1O95497 513 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 THEGLP0DJG4 465 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 ALPPL2P10696 532 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 PRLRP16471 622 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 CD58P19256 250 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 SKOR1P84550 965 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 DRAP1Q14919 205 aaPredicted RBP9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 BMT2Q1RMZ1 405 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 HNRNPA1L2Q32P51 320 aaKnown RBP9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 ZNF394Q53GI3 561 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 C9orf64Q5T6V5 341 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 GUSBP11Q6P575 273 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 MMS22LQ6ZRQ5 1243 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 STXBP4Q6ZWJ1 553 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 EFL1Q7Z2Z2 1120 aaKnown RBP9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 KIAA0907Q7Z7F0 614 aaPredicted RBP9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 VASH2Q86V25 355 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 FAM217AQ8IXS0 508 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 CCDC65Q8IXS2 484 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 CRYBG2Q8N1P7 616 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 ARL14Q8N4G2 192 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 CARNMT1Q8N4J0 409 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 XXYLT1Q8NBI6 393 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 EDEM1Q92611 657 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 PLD4Q96BZ4 506 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 RPL10LQ96L21 214 aaKnown RBP9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 MRGPRX3Q96LB0 322 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 ZSCAN31Q96LW9 406 aaPredicted RBP9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 CLIC6Q96NY7 704 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 FAM129BQ96TA1 746 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 AGPAT3Q9NRZ7 376 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 ARHGAP20Q9P2F6 1191 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 CYTH4Q9UIA0 394 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 ATXN7L1Q9ULK2 861 aaPredicted RBP9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 MAN2B2Q9Y2E5 1009 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 ZFC3H1O60293 1989 aaKnown RBP9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 KIF26BQ2KJY2 2108 aa9.29□□□□□ -0.92
SNRPA1-208ENST00000559686 LY6G6EA0A0G2JKS1 128 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms