RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 USP1O94782 785 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 HAUS5O94927 633 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 AP2A1O95782 977 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 MPOP05164 745 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 APOA4P06727 396 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 DLDP09622 509 aaKnown RBP8.53□□□□□ -1.04
SPG11-209ENST00000558253 MYL4P12829 197 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 TYMPP19971 482 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 TKTP29401 623 aaKnown RBP8.53□□□□□ -1.04
SPG11-209ENST00000558253 SPRP35270 261 aaPredicted RBP8.53□□□□□ -1.04
SPG11-209ENST00000558253 GP5P40197 560 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 MAP3K7CLP57077 242 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 IRX1P78414 480 aaPredicted RBP8.53□□□□□ -1.04
SPG11-209ENST00000558253 NIPAL4Q0D2K0 466 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 WASHC5Q12768 1159 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 STX3Q13277 289 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 UPP1Q16831 310 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 CCDC153Q494R4 210 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 GNASQ5JWF2 1037 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 FAM171BQ6P995 826 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 LIAT1Q6ZQX7 453 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 DENND5BQ6ZUT9 1274 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 PID1Q7Z2X4 250 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 PRPF39Q86UA1 669 aaKnown RBP8.53□□□□□ -1.04
SPG11-209ENST00000558253 FAM35AQ86V20 835 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 WDR75Q8IWA0 830 aaKnown RBP8.53□□□□□ -1.04
SPG11-209ENST00000558253 KLHDC8BQ8IXV7 354 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 NDUFAF2Q8N183 169 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.53□□□□□ -1.04
SPG11-209ENST00000558253 ARRDC4Q8NCT1 418 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 CCNYQ8ND76 341 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 STKLD1Q8NE28 680 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 GABPB2Q8TAK5 448 aaPredicted RBP8.53□□□□□ -1.04
SPG11-209ENST00000558253 SLC7A14Q8TBB6 771 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 STON2Q8WXE9 905 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 FATE1Q969F0 183 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 ISL2Q96A47 359 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 OXNAD1Q96HP4 312 aaPredicted RBP8.53□□□□□ -1.04
SPG11-209ENST00000558253 TSGA13Q96PP4 275 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 HAPLN3Q96S86 360 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 COLEC11Q9BWP8 271 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 ULBP1Q9BZM6 244 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 SENP6Q9GZR1 1112 aaPredicted RBP8.53□□□□□ -1.04
SPG11-209ENST00000558253 IL22Q9GZX6 179 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 CXCL16Q9H2A7 254 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 PRDM12Q9H4Q4 367 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 WDCPQ9H6R7 721 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 NPHS2Q9NP85 383 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 SLCO1B3Q9NPD5 702 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 DMAP1Q9NPF5 467 aaPredicted RBP8.53□□□□□ -1.04
SPG11-209ENST00000558253 KRT82Q9NSB4 513 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 FLRT1Q9NZU1 646 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 HEY2Q9UBP5 337 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 AAR2Q9Y312 384 aaKnown RBP8.53□□□□□ -1.04
SPG11-209ENST00000558253 KAT6AQ92794 2004 aa8.53□□□□□ -1.04
SPG11-209ENST00000558253 A0A0U1RQF3 1178 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 FAM237BA0A1B0GVD1 139 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 ARL5CA6NH57 179 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 CXorf49A8MYA2 514 aaPredicted RBP8.52□□□□□ -1.05
SPG11-209ENST00000558253 GOLGA8RI6L899 631 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 M0QZQ0 153 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 LCE2BO14633 110 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 TIMM44O43615 452 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 MFSD11O43934 449 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 SNNO75324 88 aaPredicted RBP8.52□□□□□ -1.05
SPG11-209ENST00000558253 FYNP06241 537 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 C6orf222P0C671 652 aaPredicted RBP8.52□□□□□ -1.05
SPG11-209ENST00000558253 SLC2A3P11169 496 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 NCAM1P13591 858 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 VAV1P15498 845 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 ERCC2P18074 760 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 TFE3P19532 575 aaPredicted RBP8.52□□□□□ -1.05
SPG11-209ENST00000558253 CYP2B6P20813 491 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 CCNCP24863 283 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 RPIAP49247 311 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 ZNF157P51786 506 aaPredicted RBP8.52□□□□□ -1.05
SPG11-209ENST00000558253 CSE1LP55060 971 aaKnown RBP8.52□□□□□ -1.05
SPG11-209ENST00000558253 FCGRTP55899 365 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 HUNKP57058 714 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 KCNJ2P63252 427 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 TMPRSS15P98073 1019 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 PDE1BQ01064 536 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 TSPY1Q01534 308 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 NRG1Q02297 640 aaPredicted RBP8.52□□□□□ -1.05
SPG11-209ENST00000558253 GRIK3Q13003 919 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 NME3Q13232 169 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 CRYMQ14894 314 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 ZRSR2Q15696 482 aaKnown RBP8.52□□□□□ -1.05
SPG11-209ENST00000558253 UGP2Q16851 508 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 TAF1BQ53T94 588 aaPredicted RBP8.52□□□□□ -1.05
SPG11-209ENST00000558253 FAM26DQ5JW98 314 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 ZNF618Q5T7W0 954 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 OTUD1Q5VV17 481 aaPredicted RBP8.52□□□□□ -1.05
SPG11-209ENST00000558253 NAPEPLDQ6IQ20 393 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 TIGD7Q6NT04 549 aaPredicted RBP8.52□□□□□ -1.05
SPG11-209ENST00000558253 CASC4Q6P4E1 433 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 TRAF7Q6Q0C0 670 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 PACS1Q6VY07 963 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 C4orf50Q6ZRC1 276 aa8.52□□□□□ -1.05
SPG11-209ENST00000558253 TMEM135Q86UB9 458 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms