RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 CCDC13Q8IYE1 715 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 ZBED8Q8IZ13 594 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 ZNF683Q8IZ20 524 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 FAM76AQ8TAV0 307 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 PGM2Q96G03 612 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 C9orf72Q96LT7 481 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 TSGA13Q96PP4 275 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 STMN4Q9H169 189 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-233ENST00000557529 CENPHQ9H3R5 247 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 RETREG1Q9H6L5 497 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 EIF2B3Q9NR50 452 aaKnown RBP12.81□□□□□ -0.36
SHMT2-233ENST00000557529 PCDH10Q9P2E7 1040 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 IGSF9Q9P2J2 1179 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 ALPK3Q96L96 1907 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 RASGRF2O14827 1237 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 COCHO43405 550 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 TGM5O43548 720 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 HMBSP08397 361 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 SYN1P17600 705 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 CCNCP24863 283 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 PTPN3P26045 913 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 PHBP35232 272 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 LMAN1P49257 510 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 SLC11A2P49281 568 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 HARS2P49590 506 aaKnown RBP12.81□□□□□ -0.36
SHMT2-233ENST00000557529 NDST2P52849 883 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 GABPB1Q06547 395 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-233ENST00000557529 BBS9Q3SYG4 887 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 CCDC38Q502W7 563 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 FNBP1LQ5T0N5 605 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 FAXCQ5TGI0 409 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 AFMIDQ63HM1 303 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 TIGD7Q6NT04 549 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-233ENST00000557529 LILRA6Q6PI73 481 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 PID1Q7Z2X4 250 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 NLRP14Q86W24 1093 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 CHSY1Q86X52 802 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 ARHGAP12Q8IWW6 846 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 TP53INP2Q8IXH6 220 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 ZNF567Q8N184 647 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 UMODL1-AS1Q8N2C9 162 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 ATPAF2Q8N5M1 289 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 ATP11CQ8NB49 1132 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 UHMK1Q8TAS1 419 aaKnown RBP12.81□□□□□ -0.36
SHMT2-233ENST00000557529 PYROXD1Q8WU10 500 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 AZIN2Q96A70 460 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 LRRC39Q96DD0 335 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 CELF6Q96J87 481 aaKnown RBP12.81□□□□□ -0.36
SHMT2-233ENST00000557529 KLHL5Q96PQ7 755 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 PRMT1Q99873 361 aaKnown RBP12.81□□□□□ -0.36
SHMT2-233ENST00000557529 TCF25Q9BQ70 676 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 PPCSQ9HAB8 311 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 XAB2Q9HCS7 855 aaKnown RBP12.81□□□□□ -0.36
SHMT2-233ENST00000557529 ENTPD7Q9NQZ7 604 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 TMEM248Q9NWD8 314 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 KLHL8Q9P2G9 620 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-233ENST00000557529 VANGL2Q9ULK5 521 aa12.81□□□□□ -0.36
SHMT2-233ENST00000557529 ZMYND8Q9ULU4 1186 aaPredicted RBP12.81□□□□□ -0.36
SHMT2-233ENST00000557529 LCHNA4D1U4 455 aa12.8□□□□□ -0.36
SHMT2-233ENST00000557529 DRGXA6NNA5 263 aa12.8□□□□□ -0.36
SHMT2-233ENST00000557529 F5H5T6 163 aa12.8□□□□□ -0.36
SHMT2-233ENST00000557529 KCNK1O00180 336 aa12.8□□□□□ -0.36
SHMT2-233ENST00000557529 DFFAO00273 331 aa12.8□□□□□ -0.36
SHMT2-233ENST00000557529 ACSL4O60488 711 aa12.8□□□□□ -0.36
SHMT2-233ENST00000557529 LPXNO60711 386 aa12.8□□□□□ -0.36
SHMT2-233ENST00000557529 SPAG6O75602 509 aa12.8□□□□□ -0.36
SHMT2-233ENST00000557529 OAS1P00973 400 aaKnown RBP12.8□□□□□ -0.36
SHMT2-233ENST00000557529 LRG1P02750 347 aa12.8□□□□□ -0.36
SHMT2-233ENST00000557529 MLNP12872 115 aa12.8□□□□□ -0.36
SHMT2-233ENST00000557529 TACR2P21452 398 aa12.8□□□□□ -0.36
SHMT2-233ENST00000557529 KCNQ1P51787 676 aa12.8□□□□□ -0.36
SHMT2-233ENST00000557529 GAD2Q05329 585 aa12.8□□□□□ -0.36
SHMT2-233ENST00000557529 TEX44Q53QW1 395 aa12.8□□□□□ -0.36
SHMT2-233ENST00000557529 RAP1GAP2Q684P5 730 aa12.8□□□□□ -0.36
SHMT2-233ENST00000557529 FBXL22Q6P050 247 aa12.8□□□□□ -0.36
SHMT2-233ENST00000557529 RTL10Q7L3V2 364 aa12.8□□□□□ -0.36
SHMT2-233ENST00000557529 NETO2Q8NC67 525 aa12.8□□□□□ -0.36
SHMT2-233ENST00000557529 SERPINB12Q96P63 405 aa12.8□□□□□ -0.36
SHMT2-233ENST00000557529 PPP1R2P1Q96PQ5 205 aa12.8□□□□□ -0.36
SHMT2-233ENST00000557529 DDX50Q9BQ39 737 aaKnown RBP12.8□□□□□ -0.36
SHMT2-233ENST00000557529 SLC39A8Q9C0K1 460 aa12.8□□□□□ -0.36
SHMT2-233ENST00000557529 VPS37BQ9H9H4 285 aa12.8□□□□□ -0.36
SHMT2-233ENST00000557529 MPP6Q9NZW5 540 aa12.8□□□□□ -0.36
SHMT2-233ENST00000557529 TLDC2A0PJX2 215 aa12.79□□□□□ -0.36
SHMT2-233ENST00000557529 LINC01553A4QN01 128 aa12.79□□□□□ -0.36
SHMT2-233ENST00000557529 ARHGAP42A6NI28 874 aa12.79□□□□□ -0.36
SHMT2-233ENST00000557529 ERI2A8K979 691 aaKnown RBP12.79□□□□□ -0.36
SHMT2-233ENST00000557529 C5orf67F2Z3F1 127 aa12.79□□□□□ -0.36
SHMT2-233ENST00000557529 RGS16O15492 202 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-233ENST00000557529 GLUD1P00367 558 aa12.79□□□□□ -0.36
SHMT2-233ENST00000557529 C1RP00736 705 aa12.79□□□□□ -0.36
SHMT2-233ENST00000557529 F11P03951 625 aa12.79□□□□□ -0.36
SHMT2-233ENST00000557529 RB1P06400 928 aa12.79□□□□□ -0.36
SHMT2-233ENST00000557529 MAPKAPK2P49137 400 aa12.79□□□□□ -0.36
SHMT2-233ENST00000557529 IFI35P80217 286 aaPredicted RBP12.79□□□□□ -0.36
SHMT2-233ENST00000557529 FASTKD3Q14CZ7 662 aaKnown RBP12.79□□□□□ -0.36
SHMT2-233ENST00000557529 ANO4Q32M45 955 aa12.79□□□□□ -0.36
SHMT2-233ENST00000557529 C5orf22Q49AR2 442 aa12.79□□□□□ -0.36
SHMT2-233ENST00000557529 MSS51Q4VC12 460 aa12.79□□□□□ -0.36
SHMT2-233ENST00000557529 RABGAP1LQ5R372 815 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms