RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 STX17P56962 302 aa17.59■□□□□ 0.41
NEK9-204ENST00000554258 ADAM9Q13443 819 aa17.59■□□□□ 0.41
NEK9-204ENST00000554258 NCAPHQ15003 741 aa17.59■□□□□ 0.41
NEK9-204ENST00000554258 TBR1Q16650 682 aa17.59■□□□□ 0.41
NEK9-204ENST00000554258 TMEM215Q68D42 235 aa17.59■□□□□ 0.41
NEK9-204ENST00000554258 ZNF776Q68DI1 518 aaPredicted RBP17.59■□□□□ 0.41
NEK9-204ENST00000554258 CLEC14AQ86T13 490 aa17.59■□□□□ 0.41
NEK9-204ENST00000554258 SPATS2Q86XZ4 545 aaKnown RBP17.59■□□□□ 0.41
NEK9-204ENST00000554258 MAPK15Q8TD08 544 aa17.59■□□□□ 0.41
NEK9-204ENST00000554258 GOLGA1Q92805 767 aa17.59■□□□□ 0.41
NEK9-204ENST00000554258 PRR11Q96HE9 360 aaPredicted RBP17.59■□□□□ 0.41
NEK9-204ENST00000554258 HPDLQ96IR7 371 aa17.59■□□□□ 0.41
NEK9-204ENST00000554258 KCNK16Q96T55 309 aa17.59■□□□□ 0.41
NEK9-204ENST00000554258 FAM213AQ9BRX8 229 aa17.59■□□□□ 0.41
NEK9-204ENST00000554258 TMEM245Q9H330 911 aa17.59■□□□□ 0.41
NEK9-204ENST00000554258 SNX25Q9H3E2 840 aa17.59■□□□□ 0.41
NEK9-204ENST00000554258 GEMIN8Q9NWZ8 242 aaKnown RBP17.59■□□□□ 0.41
NEK9-204ENST00000554258 LRRC72A6NJI9 287 aa17.58■□□□□ 0.4
NEK9-204ENST00000554258 CETN3O15182 167 aa17.58■□□□□ 0.4
NEK9-204ENST00000554258 TNFSF15O95150 251 aa17.58■□□□□ 0.4
NEK9-204ENST00000554258 GP1BAP07359 652 aa17.58■□□□□ 0.4
NEK9-204ENST00000554258 PTPN1P18031 435 aaKnown RBP17.58■□□□□ 0.4
NEK9-204ENST00000554258 NR2F2P24468 414 aa17.58■□□□□ 0.4
NEK9-204ENST00000554258 GNL1P36915 607 aaPredicted RBP17.58■□□□□ 0.4
NEK9-204ENST00000554258 CYP2J2P51589 502 aa17.58■□□□□ 0.4
NEK9-204ENST00000554258 KCNJ12Q14500 433 aa17.58■□□□□ 0.4
NEK9-204ENST00000554258 ANO6Q4KMQ2 910 aa17.58■□□□□ 0.4
NEK9-204ENST00000554258 Q6ZNB5 142 aa17.58■□□□□ 0.4
NEK9-204ENST00000554258 USP30Q70CQ3 517 aa17.58■□□□□ 0.4
NEK9-204ENST00000554258 OR4C6Q8NH72 309 aa17.58■□□□□ 0.4
NEK9-204ENST00000554258 GRAMD1AQ96CP6 724 aa17.58■□□□□ 0.4
NEK9-204ENST00000554258 SAAL1Q96ER3 474 aa17.58■□□□□ 0.4
NEK9-204ENST00000554258 CEP63Q96MT8 703 aa17.58■□□□□ 0.4
NEK9-204ENST00000554258 MTMR12Q9C0I1 747 aa17.58■□□□□ 0.4
NEK9-204ENST00000554258 PRSS16Q9NQE7 514 aa17.58■□□□□ 0.4
NEK9-204ENST00000554258 FBXL12Q9NXK8 326 aa17.58■□□□□ 0.4
NEK9-204ENST00000554258 PLA2G4CQ9UP65 541 aa17.58■□□□□ 0.4
NEK9-204ENST00000554258 DOCK9Q9BZ29 2069 aa17.57■□□□□ 0.4
NEK9-204ENST00000554258 ZFHX3Q15911 3703 aa17.57■□□□□ 0.4
NEK9-204ENST00000554258 COL27A1Q8IZC6 1860 aaPredicted RBP17.57■□□□□ 0.4
NEK9-204ENST00000554258 PMS2P1A4D2B8 440 aa17.57■□□□□ 0.4
NEK9-204ENST00000554258 GOLGA8IPA6NC78 632 aa17.57■□□□□ 0.4
NEK9-204ENST00000554258 ZNF233A6NK53 670 aa17.57■□□□□ 0.4
NEK9-204ENST00000554258 GOLGA8JA6NMD2 632 aa17.57■□□□□ 0.4
NEK9-204ENST00000554258 FFAR2O15552 330 aa17.57■□□□□ 0.4
NEK9-204ENST00000554258 EXOC3O60645 756 aa17.57■□□□□ 0.4
NEK9-204ENST00000554258 TMEM191BP0C7N4 346 aa17.57■□□□□ 0.4
NEK9-204ENST00000554258 CASRP41180 1078 aa17.57■□□□□ 0.4
NEK9-204ENST00000554258 MLLT3P42568 568 aaPredicted RBP17.57■□□□□ 0.4
NEK9-204ENST00000554258 CASP4P49662 377 aa17.57■□□□□ 0.4
NEK9-204ENST00000554258 PGFP49763 221 aa17.57■□□□□ 0.4
NEK9-204ENST00000554258 ENPEPQ07075 957 aa17.57■□□□□ 0.4
NEK9-204ENST00000554258 CBWD2Q8IUF1 395 aa17.57■□□□□ 0.4
NEK9-204ENST00000554258 BRSK2Q8IWQ3 736 aa17.57■□□□□ 0.4
NEK9-204ENST00000554258 SLC25A45Q8N413 288 aa17.57■□□□□ 0.4
NEK9-204ENST00000554258 RDH13Q8NBN7 331 aa17.57■□□□□ 0.4
NEK9-204ENST00000554258 OR6B3Q8NGW1 331 aa17.57■□□□□ 0.4
NEK9-204ENST00000554258 OR2T34Q8NGX1 318 aa17.57■□□□□ 0.4
NEK9-204ENST00000554258 CYB5D2Q8WUJ1 264 aa17.57■□□□□ 0.4
NEK9-204ENST00000554258 B3GNT5Q9BYG0 378 aa17.57■□□□□ 0.4
NEK9-204ENST00000554258 PABPC3Q9H361 631 aaKnown RBP17.57■□□□□ 0.4
NEK9-204ENST00000554258 TLR8Q9NR97 1041 aaKnown RBP17.57■□□□□ 0.4
NEK9-204ENST00000554258 IL37Q9NZH6 218 aa17.57■□□□□ 0.4
NEK9-204ENST00000554258 RP1P56715 2156 aa17.56■□□□□ 0.4
NEK9-204ENST00000554258 LZTS3O60299 673 aaPredicted RBP17.56■□□□□ 0.4
NEK9-204ENST00000554258 THEGLP0DJG4 465 aa17.56■□□□□ 0.4
NEK9-204ENST00000554258 CHKAP35790 457 aa17.56■□□□□ 0.4
NEK9-204ENST00000554258 PSMC2P35998 433 aaKnown RBP17.56■□□□□ 0.4
NEK9-204ENST00000554258 CCR5P51681 352 aa17.56■□□□□ 0.4
NEK9-204ENST00000554258 SNRNP35Q16560 246 aaKnown RBP17.56■□□□□ 0.4
NEK9-204ENST00000554258 IRF2BP1Q8IU81 584 aa17.56■□□□□ 0.4
NEK9-204ENST00000554258 MFSD2AQ8NA29 543 aa17.56■□□□□ 0.4
NEK9-204ENST00000554258 MRPL45Q9BRJ2 306 aaKnown RBP17.56■□□□□ 0.4
NEK9-204ENST00000554258 NAT10Q9H0A0 1025 aaKnown RBP17.56■□□□□ 0.4
NEK9-204ENST00000554258 DPEP3Q9H4B8 488 aa17.56■□□□□ 0.4
NEK9-204ENST00000554258 COMMD8Q9NX08 183 aa17.56■□□□□ 0.4
NEK9-204ENST00000554258 RBAKQ9NYW8 714 aaPredicted RBP17.56■□□□□ 0.4
NEK9-204ENST00000554258 SERGEFQ9UGK8 458 aa17.56■□□□□ 0.4
NEK9-204ENST00000554258 CLEC4EQ9ULY5 219 aa17.56■□□□□ 0.4
NEK9-204ENST00000554258 SCML1Q9UN30 329 aa17.56■□□□□ 0.4
NEK9-204ENST00000554258 NME7Q9Y5B8 376 aa17.56■□□□□ 0.4
NEK9-204ENST00000554258 ENTPD2Q9Y5L3 495 aa17.56■□□□□ 0.4
NEK9-204ENST00000554258 CSMD1Q96PZ7 3565 aa17.56■□□□□ 0.4
NEK9-204ENST00000554258 MED13Q9UHV7 2174 aa17.56■□□□□ 0.4
NEK9-204ENST00000554258 F8P00451 2351 aa17.55■□□□□ 0.4
NEK9-204ENST00000554258 ATP8B3O60423 1300 aa17.55■□□□□ 0.4
NEK9-204ENST00000554258 FAM92AA1XBS5 289 aa17.55■□□□□ 0.4
NEK9-204ENST00000554258 IKBKBO14920 756 aa17.55■□□□□ 0.4
NEK9-204ENST00000554258 SLC16A3O15427 465 aaKnown RBP17.55■□□□□ 0.4
NEK9-204ENST00000554258 MAGEC1O60732 1142 aa17.55■□□□□ 0.4
NEK9-204ENST00000554258 FGFR1OPO95684 399 aaKnown RBP17.55■□□□□ 0.4
NEK9-204ENST00000554258 CYBBP04839 570 aa17.55■□□□□ 0.4
NEK9-204ENST00000554258 ELAVL4P26378 380 aaKnown RBP17.55■□□□□ 0.4
NEK9-204ENST00000554258 MARSP56192 900 aaKnown RBP17.55■□□□□ 0.4
NEK9-204ENST00000554258 CYP24A1Q07973 514 aa17.55■□□□□ 0.4
NEK9-204ENST00000554258 SFSWAPQ12872 951 aaKnown RBP17.55■□□□□ 0.4
NEK9-204ENST00000554258 SRSF6Q13247 344 aaKnown RBP17.55■□□□□ 0.4
NEK9-204ENST00000554258 CLCA4Q14CN2 919 aa17.55■□□□□ 0.4
NEK9-204ENST00000554258 PSMD6Q15008 389 aa17.55■□□□□ 0.4
NEK9-204ENST00000554258 IQCB1Q15051 598 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms