RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 CCDC13Q8IYE1 715 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 ZNF683Q8IZ20 524 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 UMODL1-AS1Q8N2C9 162 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 NPWQ8N729 165 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 SLC22A17Q8WUG5 538 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 PPP2R3CQ969Q6 453 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 P2RY11Q96G91 374 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 SPATA13Q96N96 652 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 RPRD1AQ96P16 312 aaPredicted RBP12.71□□□□□ -0.37
RAB5B-204ENST00000548068 TSGA13Q96PP4 275 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 LGMNQ99538 433 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 GDF15Q99988 308 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 CORO1BQ9BR76 489 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 LRRC3Q9BY71 257 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 ADAM7Q9H2U9 754 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 C10orf88Q9H8K7 445 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 TRHDEQ9UKU6 1024 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 ZNF510Q9Y2H8 683 aa12.71□□□□□ -0.37
RAB5B-204ENST00000548068 YBX2Q9Y2T7 364 aaKnown RBP12.71□□□□□ -0.37
RAB5B-204ENST00000548068 MKI67P46013 3256 aaKnown RBP12.7□□□□□ -0.38
RAB5B-204ENST00000548068 TYW5A2RUC4 315 aaKnown RBP12.7□□□□□ -0.38
RAB5B-204ENST00000548068 ARHGAP42A6NI28 874 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 DFFAO00273 331 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 EIF3HO15372 352 aaKnown RBP eCLIP12.7□□□□□ -0.38
RAB5B-204ENST00000548068 SASH3O75995 380 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 CKMP06732 381 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 MYL4P12829 197 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 HDCP19113 662 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 CCNCP24863 283 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 IRS1P35568 1242 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 MAGEA6P43360 314 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 ARL4CP56559 192 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 SLC7A9P82251 487 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 SMAD3P84022 425 aaKnown RBP12.7□□□□□ -0.38
RAB5B-204ENST00000548068 CDK16Q00536 496 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 CAMK1Q14012 370 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 ANO4Q32M45 955 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 HSP90B2PQ58FF3 399 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 ANKRD20A2Q5SQ80 823 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 ADGRF1Q5T601 910 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 ANKRD20A1Q5TYW2 823 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 ANKRD20A3Q5VUR7 823 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 AFMIDQ63HM1 303 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 FBXL22Q6P050 247 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 LRIG3Q6UXM1 1119 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 CENPUQ71F23 418 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 GAREM2Q75VX8 874 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 C14orf80Q86SX3 495 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 PRUNE1Q86TP1 453 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 NLRP14Q86W24 1093 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 CCDC25Q86WR0 208 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 LGI2Q8N0V4 545 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 GOLGA6L1Q8N7Z2 621 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 UBLCP1Q8WVY7 318 aaPredicted RBP12.7□□□□□ -0.38
RAB5B-204ENST00000548068 CPT1BQ92523 772 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 PRCCQ92733 491 aaPredicted RBP12.7□□□□□ -0.38
RAB5B-204ENST00000548068 EXOC4Q96A65 974 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 PPP1R2P1Q96PQ5 205 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 PBX4Q9BYU1 374 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 TXLNGYQ9BZA5 131 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 NKX2-4Q9H2Z4 354 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 ATXN3LQ9H3M9 355 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 SLC28A3Q9HAS3 691 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 RAB6BQ9NRW1 208 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 SEPT10Q9P0V9 454 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 ATP8A1Q9Y2Q0 1164 aa12.7□□□□□ -0.38
RAB5B-204ENST00000548068 FARP1Q9Y4F1 1045 aaPredicted RBP12.7□□□□□ -0.38
RAB5B-204ENST00000548068 SHROOM3Q8TF72 1996 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 ATG2AQ2TAZ0 1938 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 E7EVH7 732 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 TP73O15350 636 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 OPA1O60313 960 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 IRF1P10914 325 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 VAV1P15498 845 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 EPCAMP16422 314 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 TPSB2P20231 275 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 HSD17B3P37058 310 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 CDH4P55283 916 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 EIF3BP55884 814 aaKnown RBP12.69□□□□□ -0.38
RAB5B-204ENST00000548068 YBEYP58557 167 aaPredicted RBP12.69□□□□□ -0.38
RAB5B-204ENST00000548068 SARNPP82979 210 aaKnown RBP12.69□□□□□ -0.38
RAB5B-204ENST00000548068 CYP4F8P98187 520 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 KCNJ11Q14654 390 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 TPSAB1Q15661 275 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 HIF1AQ16665 826 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 PARP15Q460N3 678 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 DENND2CQ68D51 928 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 TXNDC8Q6A555 127 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 NADSYN1Q6IA69 706 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 B4GALNT4Q76KP1 1039 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 CHST9Q7L1S5 443 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 SPRED2Q7Z698 418 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 CROCCP2Q86T23 111 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 RELL1Q8IUW5 271 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 DENND1CQ8IV53 801 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 ARHGAP12Q8IWW6 846 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 HS6ST3Q8IZP7 471 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 ARL14EPQ8N8R7 260 aaPredicted RBP12.69□□□□□ -0.38
RAB5B-204ENST00000548068 NAT8LQ8N9F0 302 aa12.69□□□□□ -0.38
RAB5B-204ENST00000548068 TSEN2Q8NCE0 465 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms