RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 AFMIDQ63HM1 303 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 NAIF1Q69YI7 327 aaPredicted RBP9.58□□□□□ -0.88
GNE-206ENST00000543356 MIB1Q86YT6 1006 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 RTL3Q8N8U3 475 aaKnown RBP9.58□□□□□ -0.88
GNE-206ENST00000543356 KLHL23Q8NBE8 558 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 CCNYQ8ND76 341 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 MCUQ8NE86 351 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 PPM1EQ8WY54 764 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 ZNF512Q96ME7 567 aaPredicted RBP9.58□□□□□ -0.88
GNE-206ENST00000543356 ETNK1Q9HBU6 452 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 EIF2B3Q9NR50 452 aaKnown RBP9.58□□□□□ -0.88
GNE-206ENST00000543356 GOLGA6AQ9NYA3 693 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 TRPM5Q9NZQ8 1165 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 UXTQ9UBK9 157 aaPredicted RBP9.58□□□□□ -0.88
GNE-206ENST00000543356 OBSL1O75147 1896 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 GOLGA8MH3BSY2 632 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 TCEA3O75764 348 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 METTL18O95568 372 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 CPP00450 1065 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 ATP5C1P36542 298 aaKnown RBP9.58□□□□□ -0.88
GNE-206ENST00000543356 LMAN1P49257 510 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 EPHB3P54753 998 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 GAD2Q05329 585 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 PDIA2Q13087 525 aaKnown RBP9.58□□□□□ -0.88
GNE-206ENST00000543356 FNBP1LQ5T0N5 605 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 HECTD3Q5T447 861 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 C14orf80Q86SX3 495 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 ITIH5Q86UX2 942 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 NLRP14Q86W24 1093 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 ARHGAP12Q8IWW6 846 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 TP53INP2Q8IXH6 220 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 CCDC13Q8IYE1 715 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 PDIK1LQ8N165 341 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 TAB3Q8N5C8 712 aaPredicted RBP9.58□□□□□ -0.88
GNE-206ENST00000543356 DPF3Q92784 378 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 PSMG2Q969U7 264 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 C9orf72Q96LT7 481 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 TSGA13Q96PP4 275 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 PRMT1Q99873 361 aaKnown RBP9.58□□□□□ -0.88
GNE-206ENST00000543356 MTIF3Q9H2K0 278 aaKnown RBP9.58□□□□□ -0.88
GNE-206ENST00000543356 IGSF9Q9P2J2 1179 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 ZMYND8Q9ULU4 1186 aaPredicted RBP9.58□□□□□ -0.88
GNE-206ENST00000543356 RWDD3Q9Y3V2 267 aa9.58□□□□□ -0.88
GNE-206ENST00000543356 KIAA0100Q14667 2235 aaKnown RBP9.57□□□□□ -0.88
GNE-206ENST00000543356 CNPP09543 421 aaKnown RBP9.57□□□□□ -0.88
GNE-206ENST00000543356 ATP2A2P16615 1042 aaKnown RBP9.57□□□□□ -0.88
GNE-206ENST00000543356 RHOQP17081 205 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 PTPN3P26045 913 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 CORO7P57737 925 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 AUHQ13825 339 aaKnown RBP9.57□□□□□ -0.88
GNE-206ENST00000543356 LRRC31Q6UY01 552 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 ZBED8Q8IZ13 594 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 ZNF567Q8N184 647 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 NETO2Q8NC67 525 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 PLD4Q96BZ4 506 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 PGM2Q96G03 612 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 VAT1Q99536 393 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 ZYG11BQ9C0D3 744 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 SLC24A3Q9HC58 644 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 ASB3Q9Y575 518 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 IRAK3Q9Y616 596 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 RPS6KL1Q9Y6S9 549 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 A0A087WUV0 522 aaPredicted RBP9.57□□□□□ -0.88
GNE-206ENST00000543356 DRGXA6NNA5 263 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 TLL1O43897 1013 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 IVLP07476 585 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 CDK16Q00536 496 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 STAT4Q14765 748 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 FASTKD3Q14CZ7 662 aaKnown RBP9.57□□□□□ -0.88
GNE-206ENST00000543356 TAF12Q16514 161 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 PARP6Q2NL67 630 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 MSS51Q4VC12 460 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 C6orf118Q5T5N4 469 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 FAXCQ5TGI0 409 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 LRRC49Q8IUZ0 686 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 FAM76AQ8TAV0 307 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 AZIN2Q96A70 460 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 SERPINB12Q96P63 405 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 RETREG1Q9H6L5 497 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 TMEM248Q9NWD8 314 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 TRHDEQ9UKU6 1024 aa9.57□□□□□ -0.88
GNE-206ENST00000543356 NYNRINQ9P2P1 1898 aaKnown RBP9.56□□□□□ -0.88
GNE-206ENST00000543356 COCHO43405 550 aa9.56□□□□□ -0.88
GNE-206ENST00000543356 TGM5O43548 720 aa9.56□□□□□ -0.88
GNE-206ENST00000543356 OAS1P00973 400 aaKnown RBP9.56□□□□□ -0.88
GNE-206ENST00000543356 ADH1AP07327 375 aa9.56□□□□□ -0.88
GNE-206ENST00000543356 APRTP07741 180 aa9.56□□□□□ -0.88
GNE-206ENST00000543356 CCNCP24863 283 aa9.56□□□□□ -0.88
GNE-206ENST00000543356 BMPR1AP36894 532 aa9.56□□□□□ -0.88
GNE-206ENST00000543356 MAGEA3P43357 314 aa9.56□□□□□ -0.88
GNE-206ENST00000543356 NDST2P52849 883 aa9.56□□□□□ -0.88
GNE-206ENST00000543356 C5orf22Q49AR2 442 aa9.56□□□□□ -0.88
GNE-206ENST00000543356 CCDC38Q502W7 563 aa9.56□□□□□ -0.88
GNE-206ENST00000543356 LILRA6Q6PI73 481 aa9.56□□□□□ -0.88
GNE-206ENST00000543356 DNAJB7Q7Z6W7 309 aaPredicted RBP9.56□□□□□ -0.88
GNE-206ENST00000543356 UMODL1-AS1Q8N2C9 162 aa9.56□□□□□ -0.88
GNE-206ENST00000543356 ATPAF2Q8N5M1 289 aa9.56□□□□□ -0.88
GNE-206ENST00000543356 ATP11CQ8NB49 1132 aa9.56□□□□□ -0.88
GNE-206ENST00000543356 CELF6Q96J87 481 aaKnown RBP9.56□□□□□ -0.88
GNE-206ENST00000543356 KLHL5Q96PQ7 755 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms