RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 GTF2H1P32780 548 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 ARID5AQ03989 594 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 ZNF33BQ06732 778 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 NNTQ13423 1086 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 KCNJ8Q15842 424 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 ASIC2Q16515 512 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 LY6KQ17RY6 165 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 ALFQ53S48 1182 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 FAM160B1Q5W0V3 765 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 METTL7BQ6UX53 244 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 PRR23CQ6ZRP0 262 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 C12orf56Q8IXR9 622 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 TMEM199Q8N511 208 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 PIP4K2CQ8TBX8 421 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 GIPC3Q8TF64 312 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 PPP1R13LQ8WUF5 828 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 TTC9Q92623 222 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 PRCCQ92733 491 aaPredicted RBP12.92□□□□□ -0.34
DDX55-206ENST00000539934 DGCR14Q96DF8 476 aaKnown RBP12.92□□□□□ -0.34
DDX55-206ENST00000539934 POM121Q96HA1 1249 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 PSD2Q9BQI7 771 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 POLR3FQ9H1D9 316 aaPredicted RBP12.92□□□□□ -0.34
DDX55-206ENST00000539934 HSPBP1Q9NZL4 362 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 TEKT2Q9UIF3 430 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 TFR2Q9UP52 801 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 STON1Q9Y6Q2 735 aa12.92□□□□□ -0.34
DDX55-206ENST00000539934 MYO15AQ9UKN7 3530 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 DNAJC25-GNG10A0A024R161 153 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 SSU72P8A0A1W2PR75 194 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 ZBBXA8MT70 800 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 ADAM11O75078 769 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 TSC22D2O75157 780 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 ALX3O95076 343 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 SEPHS1P49903 392 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 ATP1A2P50993 1020 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 VAV2P52735 878 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 KCNC4Q03721 635 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 EMC2Q15006 297 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 CFAP221Q4G0U5 840 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 DRICH1Q6PGQ1 229 aaPredicted RBP12.91□□□□□ -0.34
DDX55-206ENST00000539934 CXCL17Q6UXB2 119 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 CCNI2Q6ZMN8 369 aaPredicted RBP12.91□□□□□ -0.34
DDX55-206ENST00000539934 BEND4Q6ZU67 534 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 MAMDC2Q7Z304 686 aaPredicted RBP12.91□□□□□ -0.34
DDX55-206ENST00000539934 MAP4K3Q8IVH8 894 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 CD302Q8IX05 232 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 TBC1D21Q8IYX1 336 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 CCDC197Q8NCU1 140 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 FANK1Q8TC84 345 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 ATP6V1E2Q96A05 226 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 TM9SF2Q99805 663 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 WACQ9BTA9 647 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 LRFN3Q9BTN0 628 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 IFIH1Q9BYX4 1025 aaKnown RBP12.91□□□□□ -0.34
DDX55-206ENST00000539934 TRIM15Q9C019 465 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 KCNN2Q9H2S1 579 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 PLGRKTQ9HBL7 147 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 WDR6Q9NNW5 1121 aaKnown RBP12.91□□□□□ -0.34
DDX55-206ENST00000539934 AMACRQ9UHK6 382 aa12.91□□□□□ -0.34
DDX55-206ENST00000539934 IGKV6D-21A0A0A0MT36 114 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 CTAGE9A4FU28 777 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 POLR1CO15160 346 aaPredicted RBP12.9□□□□□ -0.34
DDX55-206ENST00000539934 SLC22A1O15245 554 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 POU2F1P14859 743 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 STT3AP46977 705 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 STAT5BP51692 787 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 NCALDP61601 193 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 HGSNATQ68CP4 663 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 AGMOQ6ZNB7 445 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 PEX26Q7Z412 305 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 GPR141Q7Z602 305 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 FBXO16Q8IX29 292 aaPredicted RBP12.9□□□□□ -0.34
DDX55-206ENST00000539934 FAM126BQ8IXS8 530 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 NAT8LQ8N9F0 302 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 PHOSPHO2Q8TCD6 241 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 SCLYQ96I15 445 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 NTPCRQ9BSD7 190 aaKnown RBP12.9□□□□□ -0.34
DDX55-206ENST00000539934 NUP85Q9BW27 656 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 NCOR1P1Q9H4R4 102 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 AZI2Q9H6S1 392 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 NRBP2Q9NSY0 501 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.9□□□□□ -0.34
DDX55-206ENST00000539934 MAGEB16A2A368 324 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 MOXD2PA6NHM9 499 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 H0YCG3 227 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 STX16-NPEPL1H3BU86 382 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 H7C0C1 242 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 ARVCFO00192 962 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 NOP56O00567 594 aaKnown RBP12.9□□□□□ -0.34
DDX55-206ENST00000539934 TOR1BO14657 336 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 ZNF263O14978 683 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 BET1O15155 118 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 HSF2BPO75031 334 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 ATP2C2O75185 946 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 LYNP07948 512 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 KRT7P08729 469 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 CDH3P22223 829 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 NUDT1P36639 197 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 VHLP40337 213 aa12.9□□□□□ -0.34
DDX55-206ENST00000539934 ATP5OP48047 213 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms