RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	POU5F2	Q8N7G0	328 aa		5.12	□□□□□ -1.59
ECHDC1-223	ENST00000534442	OR52N2	Q8NGI0	321 aa		5.12	□□□□□ -1.59
ECHDC1-223	ENST00000534442	ZFP28	Q8NHY6	868 aa		5.12	□□□□□ -1.59
ECHDC1-223	ENST00000534442	TBC1D15	Q8TC07	691 aa		5.12	□□□□□ -1.59
ECHDC1-223	ENST00000534442	TOP1MT	Q969P6	601 aa		5.12	□□□□□ -1.59
ECHDC1-223	ENST00000534442	ZNF566	Q969W8	418 aa		5.12	□□□□□ -1.59
ECHDC1-223	ENST00000534442	CDCA3	Q99618	268 aa	Predicted RBP	5.12	□□□□□ -1.59
ECHDC1-223	ENST00000534442	CPPED1	Q9BRF8	314 aa	Predicted RBP	5.12	□□□□□ -1.59
ECHDC1-223	ENST00000534442	STK33	Q9BYT3	514 aa		5.12	□□□□□ -1.59
ECHDC1-223	ENST00000534442	SPATC1L	Q9H0A9	340 aa		5.12	□□□□□ -1.59
ECHDC1-223	ENST00000534442	A1CF	Q9NQ94	594 aa	Known RBP	5.12	□□□□□ -1.59
ECHDC1-223	ENST00000534442	VPS45	Q9NRW7	570 aa		5.12	□□□□□ -1.59
ECHDC1-223	ENST00000534442	MROH7-TTC4	A0A0A0MT08	1334 aa		5.12	□□□□□ -1.59
ECHDC1-223	ENST00000534442	CLSPN	Q9HAW4	1339 aa		5.12	□□□□□ -1.59
ECHDC1-223	ENST00000534442	TRIP12	Q14669	1992 aa	Predicted RBP	5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	hCG_1642624	A0A1W2PR95	340 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	LNP1	A1A4G5	178 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	DRGX	A6NNA5	263 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	CLCA1	A8K7I4	914 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442		M0QYG6	137 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	AREL1	O15033	823 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	FFAR2	O15552	330 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	THAP12	O43422	761 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	KIF20A	O95235	890 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	TXN	P10599	105 aa	Known RBP	5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	KLRC1	P26715	233 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	IGHMBP2	P38935	993 aa	Known RBP	5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	EIF2S3	P41091	472 aa	Known RBP	5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	GRK6	P43250	576 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	ALDH9A1	P49189	494 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	CARS	P49589	748 aa	Known RBP	5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	POU6F2	P78424	691 aa	Predicted RBP	5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	ICA1	Q05084	483 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	SLFN5	Q08AF3	891 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	ACVR2B	Q13705	512 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	GRM7	Q14831	915 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	PTPN14	Q15678	1187 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	CCDC38	Q502W7	563 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	SLC44A4	Q53GD3	710 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	NOMO2	Q5JPE7	1267 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	RRAGB	Q5VZM2	374 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	EFCAB12	Q6NXP0	572 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	PGBD2	Q6P3X8	592 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	DRICH1	Q6PGQ1	229 aa	Predicted RBP	5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	LDHAL6A	Q6ZMR3	332 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	RNF44	Q7L0R7	432 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	BEND5	Q7L4P6	421 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	SYT12	Q8IV01	421 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	ELOA2	Q8IYF1	753 aa	Predicted RBP	5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	CPXCR1	Q8N123	301 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	MPP5	Q8N3R9	675 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	SLC44A3	Q8N4M1	653 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	MYCT1	Q8N699	235 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	FITM2	Q8N6M3	262 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	AOPEP	Q8N6M6	819 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	ZNF527	Q8NB42	609 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	SYT8	Q8NBV8	401 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	MOCOS	Q96EN8	888 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	GNRHR2	Q96P88	292 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	MYADM	Q96S97	322 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	SPATA5L1	Q9BVQ7	753 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	MRI	Q9BWK5	157 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	TLR10	Q9BXR5	811 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	STK31	Q9BXU1	1019 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	IFIH1	Q9BYX4	1025 aa	Known RBP	5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	IMPG2	Q9BZV3	1241 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	MROH8	Q9H579	483 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	AGO4	Q9HCK5	861 aa	Known RBP	5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	TMEM9B	Q9NQ34	198 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	PLA2G3	Q9NZ20	509 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	VSX1	Q9NZR4	365 aa	Predicted RBP	5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	XPR1	Q9UBH6	696 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	HECA	Q9UBI9	543 aa	Predicted RBP	5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	ITGB1BP2	Q9UKP3	347 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	SLC39A10	Q9ULF5	831 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	HDAC5	Q9UQL6	1122 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	TMX2	Q9Y320	296 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	SH3BP1	Q9Y3L3	701 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	CEP83	Q9Y592	693 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	DGKB	Q9Y6T7	804 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	DUSP10	Q9Y6W6	482 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	DENND4A	Q7Z401	1863 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442	PCSK5	Q92824	1860 aa		5.11	□□□□□ -1.59
ECHDC1-223	ENST00000534442		A0A087WZ62	844 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	PCNX2	A6NKB5	2137 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	TLR5	O60602	858 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	CHEK2	O96017	543 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	CSTB	P04080	98 aa	Known RBP	5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	INHBB	P09529	407 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	GNAT2	P19087	354 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	CNR2	P34972	360 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	RPS19	P39019	145 aa	Known RBP	5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	TOB1	P50616	345 aa	Predicted RBP	5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	RENBP	P51606	427 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	CHN2	P52757	468 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	CTSW	P56202	376 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	BLMH	Q13867	455 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	IL16	Q14005	1332 aa		5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	BOP1	Q14137	746 aa	Known RBP	5.1	□□□□□ -1.59
ECHDC1-223	ENST00000534442	NONO	Q15233	471 aa	Known RBP eCLIP	5.1	□□□□□ -1.59

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