RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 RNASEH1O60930 286 aaKnown RBP16.31■□□□□ 0.2
CPSF1-205ENST00000531042 CBFA2T3O75081 653 aa16.31■□□□□ 0.2
CPSF1-205ENST00000531042 FSBPO95073 299 aa16.31■□□□□ 0.2
CPSF1-205ENST00000531042 CD27P26842 260 aa16.31■□□□□ 0.2
CPSF1-205ENST00000531042 CDK17Q00537 523 aa16.31■□□□□ 0.2
CPSF1-205ENST00000531042 ECT2LQ008S8 904 aa16.31■□□□□ 0.2
CPSF1-205ENST00000531042 EFHC1Q5JVL4 640 aa16.31■□□□□ 0.2
CPSF1-205ENST00000531042 SMYD5Q6GMV2 418 aa16.31■□□□□ 0.2
CPSF1-205ENST00000531042 DBX2Q6ZNG2 339 aa16.31■□□□□ 0.2
CPSF1-205ENST00000531042 GLRX5Q86SX6 157 aa16.31■□□□□ 0.2
CPSF1-205ENST00000531042 APCDD1Q8J025 514 aa16.31■□□□□ 0.2
CPSF1-205ENST00000531042 DEFB106AQ8N104 65 aa16.31■□□□□ 0.2
CPSF1-205ENST00000531042 MLKLQ8NB16 471 aa16.31■□□□□ 0.2
CPSF1-205ENST00000531042 GANCQ8TET4 914 aa16.31■□□□□ 0.2
CPSF1-205ENST00000531042 SLC2A13Q96QE2 648 aa16.31■□□□□ 0.2
CPSF1-205ENST00000531042 FAM204AQ9H8W3 233 aa16.31■□□□□ 0.2
CPSF1-205ENST00000531042 ASNSD1Q9NWL6 643 aa16.31■□□□□ 0.2
CPSF1-205ENST00000531042 FBXL12Q9NXK8 326 aa16.31■□□□□ 0.2
CPSF1-205ENST00000531042 SLC12A6Q9UHW9 1150 aa16.31■□□□□ 0.2
CPSF1-205ENST00000531042 SLCO3A1Q9UIG8 710 aa16.31■□□□□ 0.2
CPSF1-205ENST00000531042 TMEM131Q92545 1883 aa16.31■□□□□ 0.2
CPSF1-205ENST00000531042 NYNRINQ9P2P1 1898 aaKnown RBP16.31■□□□□ 0.2
CPSF1-205ENST00000531042 F5H5T6 163 aa16.3■□□□□ 0.2
CPSF1-205ENST00000531042 IGHV4-34P06331 123 aa16.3■□□□□ 0.2
CPSF1-205ENST00000531042 FTH1P19P0C7X4 201 aa16.3■□□□□ 0.2
CPSF1-205ENST00000531042 SLC2A3P11169 496 aa16.3■□□□□ 0.2
CPSF1-205ENST00000531042 CCR1P32246 355 aa16.3■□□□□ 0.2
CPSF1-205ENST00000531042 MTIF2P46199 727 aaKnown RBP16.3■□□□□ 0.2
CPSF1-205ENST00000531042 GRIA4P48058 902 aa16.3■□□□□ 0.2
CPSF1-205ENST00000531042 PTK2Q05397 1052 aa16.3■□□□□ 0.2
CPSF1-205ENST00000531042 SFSWAPQ12872 951 aaKnown RBP16.3■□□□□ 0.2
CPSF1-205ENST00000531042 SLC12A1Q13621 1099 aa16.3■□□□□ 0.2
CPSF1-205ENST00000531042 TEAD4Q15561 434 aa16.3■□□□□ 0.2
CPSF1-205ENST00000531042 CST6Q15828 149 aa16.3■□□□□ 0.2
CPSF1-205ENST00000531042 KIF19Q2TAC6 998 aa16.3■□□□□ 0.2
CPSF1-205ENST00000531042 KIAA0895LQ68EN5 471 aa16.3■□□□□ 0.2
CPSF1-205ENST00000531042 PASD1Q8IV76 773 aa16.3■□□□□ 0.2
CPSF1-205ENST00000531042 CCAR2Q8N163 923 aaKnown RBP16.3■□□□□ 0.2
CPSF1-205ENST00000531042 SETD7Q8WTS6 366 aaKnown RBP16.3■□□□□ 0.2
CPSF1-205ENST00000531042 RPL10LQ96L21 214 aaKnown RBP16.3■□□□□ 0.2
CPSF1-205ENST00000531042 ORAI3Q9BRQ5 295 aa16.3■□□□□ 0.2
CPSF1-205ENST00000531042 SIX2Q9NPC8 291 aa16.3■□□□□ 0.2
CPSF1-205ENST00000531042 DDIT4Q9NX09 232 aa16.3■□□□□ 0.2
CPSF1-205ENST00000531042 SERGEFQ9UGK8 458 aa16.3■□□□□ 0.2
CPSF1-205ENST00000531042 AJAP1Q9UKB5 411 aaPredicted RBP16.3■□□□□ 0.2
CPSF1-205ENST00000531042 ANKRD6Q9Y2G4 727 aa16.3■□□□□ 0.2
CPSF1-205ENST00000531042 CEP83Q9Y592 693 aa16.3■□□□□ 0.2
CPSF1-205ENST00000531042 PCDHGB2Q9Y5G2 931 aa16.3■□□□□ 0.2
CPSF1-205ENST00000531042 SNX11Q9Y5W9 270 aa16.3■□□□□ 0.2
CPSF1-205ENST00000531042 DMXL2Q8TDJ6 3036 aa16.29■□□□□ 0.2
CPSF1-205ENST00000531042 EDDM13A0A1B0GTR0 161 aa16.29■□□□□ 0.2
CPSF1-205ENST00000531042 MID1O15344 667 aa16.29■□□□□ 0.2
CPSF1-205ENST00000531042 HSF2BPO75031 334 aa16.29■□□□□ 0.2
CPSF1-205ENST00000531042 GRAP2O75791 330 aa16.29■□□□□ 0.2
CPSF1-205ENST00000531042 ABCB4P21439 1286 aa16.29■□□□□ 0.2
CPSF1-205ENST00000531042 CLCN1P35523 988 aa16.29■□□□□ 0.2
CPSF1-205ENST00000531042 GALCP54803 685 aa16.29■□□□□ 0.2
CPSF1-205ENST00000531042 TTC39BQ5VTQ0 682 aaPredicted RBP16.29■□□□□ 0.2
CPSF1-205ENST00000531042 RNF219Q5W0B1 726 aaPredicted RBP16.29■□□□□ 0.2
CPSF1-205ENST00000531042 C11orf57Q6ZUT1 292 aaPredicted RBP16.29■□□□□ 0.2
CPSF1-205ENST00000531042 FAM183BPQ6ZVS7 135 aa16.29■□□□□ 0.2
CPSF1-205ENST00000531042 CIR1Q86X95 450 aaPredicted RBP16.29■□□□□ 0.2
CPSF1-205ENST00000531042 MMAAQ8IVH4 418 aaKnown RBP16.29■□□□□ 0.2
CPSF1-205ENST00000531042 PNPLA1Q8N8W4 532 aa16.29■□□□□ 0.2
CPSF1-205ENST00000531042 C1orf131Q8NDD1 294 aaKnown RBP16.29■□□□□ 0.2
CPSF1-205ENST00000531042 BAHD1Q8TBE0 780 aaPredicted RBP16.29■□□□□ 0.2
CPSF1-205ENST00000531042 ADAMTS14Q8WXS8 1223 aa16.29■□□□□ 0.2
CPSF1-205ENST00000531042 NOX5Q96PH1 765 aa16.29■□□□□ 0.2
CPSF1-205ENST00000531042 FAM129BQ96TA1 746 aa16.29■□□□□ 0.2
CPSF1-205ENST00000531042 NEUROG2Q9H2A3 272 aa16.29■□□□□ 0.2
CPSF1-205ENST00000531042 ADAMTS1Q9UHI8 967 aa16.29■□□□□ 0.2
CPSF1-205ENST00000531042 DNAJC12Q9UKB3 198 aa16.29■□□□□ 0.2
CPSF1-205ENST00000531042 PLXNA2O75051 1894 aa16.29■□□□□ 0.2
CPSF1-205ENST00000531042 SYNJ2BP-COX16A0A087WUM0 186 aa16.28■□□□□ 0.2
CPSF1-205ENST00000531042 A0A1B0GVM2 712 aa16.28■□□□□ 0.2
CPSF1-205ENST00000531042 A0A1W2PP55 124 aa16.28■□□□□ 0.2
CPSF1-205ENST00000531042 TCAF2A6NFQ2 919 aa16.28■□□□□ 0.2
CPSF1-205ENST00000531042 FAM47DPA6NHR8 397 aa16.28■□□□□ 0.2
CPSF1-205ENST00000531042 FOXN3O00409 490 aaPredicted RBP16.28■□□□□ 0.2
CPSF1-205ENST00000531042 FLRT2O43155 660 aa16.28■□□□□ 0.2
CPSF1-205ENST00000531042 ERBB2P04626 1255 aa16.28■□□□□ 0.2
CPSF1-205ENST00000531042 PDGFRAP16234 1089 aa16.28■□□□□ 0.2
CPSF1-205ENST00000531042 MZF1P28698 734 aaPredicted RBP16.28■□□□□ 0.2
CPSF1-205ENST00000531042 SLC8A1P32418 973 aa16.28■□□□□ 0.2
CPSF1-205ENST00000531042 KRT9P35527 623 aa16.28■□□□□ 0.2
CPSF1-205ENST00000531042 STK19P49842 368 aaPredicted RBP16.28■□□□□ 0.2
CPSF1-205ENST00000531042 PLK1P53350 603 aa16.28■□□□□ 0.2
CPSF1-205ENST00000531042 MAN2A1Q16706 1144 aa16.28■□□□□ 0.2
CPSF1-205ENST00000531042 TPD52L1Q16890 204 aaPredicted RBP16.28■□□□□ 0.2
CPSF1-205ENST00000531042 RABGAP1LQ5R372 815 aa16.28■□□□□ 0.2
CPSF1-205ENST00000531042 OR6B2Q6IFH4 312 aa16.28■□□□□ 0.2
CPSF1-205ENST00000531042 CXorf57Q6NSI4 855 aaKnown RBP16.28■□□□□ 0.2
CPSF1-205ENST00000531042 FBXL22Q6P050 247 aa16.28■□□□□ 0.2
CPSF1-205ENST00000531042 OLFML1Q6UWY5 402 aa16.28■□□□□ 0.2
CPSF1-205ENST00000531042 LAYNQ6UX15 382 aa16.28■□□□□ 0.2
CPSF1-205ENST00000531042 SLCO6A1Q86UG4 719 aa16.28■□□□□ 0.2
CPSF1-205ENST00000531042 PTPRN2Q92932 1015 aa16.28■□□□□ 0.2
CPSF1-205ENST00000531042 RNF34Q969K3 372 aa16.28■□□□□ 0.2
CPSF1-205ENST00000531042 COX16Q9P0S2 106 aa16.28■□□□□ 0.2
CPSF1-205ENST00000531042 FZD4Q9ULV1 537 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms