RNA–Protein interactions for RNA: ENST00000528281.5

CNKSR1-212, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-212ENST00000528281 N4BP2L1Q5TBK1 243 aaPredicted RBP18.37■□□□□ 0.53
CNKSR1-212ENST00000528281 DCAF12L1Q5VU92 463 aa18.37■□□□□ 0.53
CNKSR1-212ENST00000528281 ZNF776Q68DI1 518 aaPredicted RBP18.37■□□□□ 0.53
CNKSR1-212ENST00000528281 PSAPL1Q6NUJ1 521 aa18.37■□□□□ 0.53
CNKSR1-212ENST00000528281 XYLT1Q86Y38 959 aa18.37■□□□□ 0.53
CNKSR1-212ENST00000528281 APCDD1Q8J025 514 aa18.37■□□□□ 0.53
CNKSR1-212ENST00000528281 NT5C3BQ969T7 300 aa18.37■□□□□ 0.53
CNKSR1-212ENST00000528281 PGAP3Q96FM1 320 aaPredicted RBP18.37■□□□□ 0.53
CNKSR1-212ENST00000528281 RPRD1AQ96P16 312 aaPredicted RBP18.37■□□□□ 0.53
CNKSR1-212ENST00000528281 RSPH9Q9H1X1 276 aaPredicted RBP18.37■□□□□ 0.53
CNKSR1-212ENST00000528281 FAM207AQ9NSI2 230 aaPredicted RBP18.37■□□□□ 0.53
CNKSR1-212ENST00000528281 HS3ST4Q9Y661 456 aa18.37■□□□□ 0.53
CNKSR1-212ENST00000528281 NYNRINQ9P2P1 1898 aaKnown RBP18.37■□□□□ 0.53
CNKSR1-212ENST00000528281 TARSL2A2RTX5 802 aaKnown RBP18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 ARHGAP33O14559 1287 aa18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 F9P00740 461 aa18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 MMEP08473 750 aa18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 CTSOP43234 321 aaPredicted RBP18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 CXCR3P49682 368 aa18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 KLK7P49862 253 aa18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 SULT1E1P49888 294 aa18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 NOVA1P51513 510 aaKnown RBP18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 PLK1P53350 603 aa18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 COPB1P53618 953 aaKnown RBP18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 JAM2P57087 298 aa18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 POLR2FP61218 127 aaKnown RBP18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 NOMO3P69849 1222 aa18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 SULT2A1Q06520 285 aa18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 TTC31Q49AM3 519 aaPredicted RBP18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 BRMS1LQ5PSV4 323 aa18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 CCDC183Q5T5S1 534 aa18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 FAM102AQ5T9C2 384 aaPredicted RBP18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 OTUD1Q5VV17 481 aaPredicted RBP18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 RNF219Q5W0B1 726 aaPredicted RBP18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 ITIH6Q6UXX5 1313 aa18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 SND1Q7KZF4 910 aaKnown RBP eCLIP18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 FAM124AQ86V42 546 aa18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 CIR1Q86X95 450 aaPredicted RBP18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 ASCC3Q8N3C0 2202 aaKnown RBP18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 IGSF8Q969P0 613 aa18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 PPP1R9BQ96SB3 815 aa18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 GTPBP2Q9BX10 602 aaKnown RBP18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 MTG2Q9H4K7 406 aa18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 WDCPQ9H6R7 721 aa18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 FSCN3Q9NQT6 498 aa18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 PIGVQ9NUD9 493 aa18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 ARHGEF38Q9NXL2 777 aa18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 LIMA1Q9UHB6 759 aaKnown RBP18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 VANGL2Q9ULK5 521 aa18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 SCML1Q9UN30 329 aa18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 SIK3Q9Y2K2 1263 aa18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 PAXBP1Q9Y5B6 917 aa18.36■□□□□ 0.53
CNKSR1-212ENST00000528281 A0A1B0GTW7 788 aa18.35■□□□□ 0.53
CNKSR1-212ENST00000528281 LRRC10BA6NIK2 292 aa18.35■□□□□ 0.53
CNKSR1-212ENST00000528281 RNASEH1O60930 286 aaKnown RBP18.35■□□□□ 0.53
CNKSR1-212ENST00000528281 SIN3BO75182 1162 aa18.35■□□□□ 0.53
CNKSR1-212ENST00000528281 PAGE1O75459 146 aa18.35■□□□□ 0.53
CNKSR1-212ENST00000528281 GFPT2O94808 682 aa18.35■□□□□ 0.53
CNKSR1-212ENST00000528281 CEACAM1P13688 526 aa18.35■□□□□ 0.53
CNKSR1-212ENST00000528281 PDGFRAP16234 1089 aa18.35■□□□□ 0.53
CNKSR1-212ENST00000528281 ACSL1P33121 698 aa18.35■□□□□ 0.53
CNKSR1-212ENST00000528281 SOX5P35711 763 aa18.35■□□□□ 0.53
CNKSR1-212ENST00000528281 SLC25A52Q3SY17 297 aa18.35■□□□□ 0.53
CNKSR1-212ENST00000528281 C5orf22Q49AR2 442 aa18.35■□□□□ 0.53
CNKSR1-212ENST00000528281 C9orf64Q5T6V5 341 aa18.35■□□□□ 0.53
CNKSR1-212ENST00000528281 SH3PXD2AQ5TCZ1 1133 aa18.35■□□□□ 0.53
CNKSR1-212ENST00000528281 CXorf57Q6NSI4 855 aaKnown RBP18.35■□□□□ 0.53
CNKSR1-212ENST00000528281 DHX40Q8IX18 779 aaKnown RBP18.35■□□□□ 0.53
CNKSR1-212ENST00000528281 HDDC3Q8N4P3 179 aa18.35■□□□□ 0.53
CNKSR1-212ENST00000528281 CPA5Q8WXQ8 436 aa18.35■□□□□ 0.53
CNKSR1-212ENST00000528281 ADAM33Q9BZ11 813 aa18.35■□□□□ 0.53
CNKSR1-212ENST00000528281 BTBD1Q9H0C5 482 aa18.35■□□□□ 0.53
CNKSR1-212ENST00000528281 NOCTQ9UK39 431 aaKnown RBP18.35■□□□□ 0.53
CNKSR1-212ENST00000528281 CACNA1EQ15878 2313 aa18.34■□□□□ 0.53
CNKSR1-212ENST00000528281 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.34■□□□□ 0.53
CNKSR1-212ENST00000528281 EDDM13A0A1B0GTR0 161 aa18.34■□□□□ 0.53
CNKSR1-212ENST00000528281 LGALS16A8MUM7 142 aa18.34■□□□□ 0.53
CNKSR1-212ENST00000528281 TTC34A8MYJ7 566 aa18.34■□□□□ 0.53
CNKSR1-212ENST00000528281 UPK3BL1B0FP48 263 aa18.34■□□□□ 0.53
CNKSR1-212ENST00000528281 UPK3BL2E5RIL1 263 aa18.34■□□□□ 0.53
CNKSR1-212ENST00000528281 EPHB6O15197 1021 aa18.34■□□□□ 0.53
CNKSR1-212ENST00000528281 OPHN1O60890 802 aa18.34■□□□□ 0.53
CNKSR1-212ENST00000528281 CLDN11O75508 207 aa18.34■□□□□ 0.53
CNKSR1-212ENST00000528281 ADCY5O95622 1261 aa18.34■□□□□ 0.53
CNKSR1-212ENST00000528281 TFE3P19532 575 aaPredicted RBP18.34■□□□□ 0.53
CNKSR1-212ENST00000528281 CDK11BP21127 795 aaKnown RBP18.34■□□□□ 0.53
CNKSR1-212ENST00000528281 MZF1P28698 734 aaPredicted RBP18.34■□□□□ 0.53
CNKSR1-212ENST00000528281 NNMTP40261 264 aa18.34■□□□□ 0.53
CNKSR1-212ENST00000528281 STAT1P42224 750 aa18.34■□□□□ 0.53
CNKSR1-212ENST00000528281 CDR2Q01850 454 aa18.34■□□□□ 0.53
CNKSR1-212ENST00000528281 CENPCQ03188 943 aa18.34■□□□□ 0.53
CNKSR1-212ENST00000528281 DEUP1Q05D60 604 aa18.34■□□□□ 0.53
CNKSR1-212ENST00000528281 SFSWAPQ12872 951 aaKnown RBP18.34■□□□□ 0.53
CNKSR1-212ENST00000528281 ZNF177Q13360 481 aaPredicted RBP18.34■□□□□ 0.53
CNKSR1-212ENST00000528281 SYCP1Q15431 976 aa18.34■□□□□ 0.53
CNKSR1-212ENST00000528281 ACBD5Q5T8D3 534 aaPredicted RBP18.34■□□□□ 0.53
CNKSR1-212ENST00000528281 NAA35Q5VZE5 725 aa18.34■□□□□ 0.53
CNKSR1-212ENST00000528281 USP30Q70CQ3 517 aa18.34■□□□□ 0.53
CNKSR1-212ENST00000528281 ARCQ7LC44 396 aa18.34■□□□□ 0.53
CNKSR1-212ENST00000528281 MINDY1Q8N5J2 469 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms