RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 I6L893 689 aaPredicted RBP15.73■□□□□ 0.11
USH1C-207ENST00000527720 AP3B1O00203 1094 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 ITGA2BP08514 1039 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 GP5P40197 560 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 WASHC2DQ5SRD0 308 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 GRTP1Q5TC63 336 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 KCTD11Q693B1 232 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 DCLRE1AQ6PJP8 1040 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 CXCL17Q6UXB2 119 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 UNC5BQ8IZJ1 945 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 WWP1Q9H0M0 922 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 CASS4Q9NQ75 786 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 THAP1Q9NVV9 213 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 TXNDC16Q9P2K2 825 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 MAGEB16A2A368 324 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 KCNK1O00180 336 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 USP1O94782 785 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 CTSHP09668 335 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 STX3Q13277 289 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 RASSF3Q86WH2 238 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 TP53INP2Q8IXH6 220 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 NETO2Q8NC67 525 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 FAM13CQ8NE31 585 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 GORASP1Q9BQQ3 440 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 RTP3Q9BQQ7 232 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 BTBD10Q9BSF8 475 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 DMAP1Q9NPF5 467 aaPredicted RBP15.73■□□□□ 0.11
USH1C-207ENST00000527720 OR12D3Q9UGF7 316 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 VANGL2Q9ULK5 521 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 RPS6KL1Q9Y6S9 549 aa15.73■□□□□ 0.11
USH1C-207ENST00000527720 FAM237BA0A1B0GVD1 139 aa15.72■□□□□ 0.11
USH1C-207ENST00000527720 ARHGEF37A1IGU5 675 aa15.72■□□□□ 0.11
USH1C-207ENST00000527720 TPP1O14773 563 aa15.72■□□□□ 0.11
USH1C-207ENST00000527720 DNAJB2P25686 324 aa15.72■□□□□ 0.11
USH1C-207ENST00000527720 PDE1CQ14123 709 aaPredicted RBP15.72■□□□□ 0.11
USH1C-207ENST00000527720 MAPRE1Q15691 268 aaKnown RBP15.72■□□□□ 0.11
USH1C-207ENST00000527720 MFSD14CQ5VZR4 134 aa15.72■□□□□ 0.11
USH1C-207ENST00000527720 BSPRYQ5W0U4 402 aa15.72■□□□□ 0.11
USH1C-207ENST00000527720 TMEM135Q86UB9 458 aa15.72■□□□□ 0.11
USH1C-207ENST00000527720 NPWQ8N729 165 aa15.72■□□□□ 0.11
USH1C-207ENST00000527720 OR52K1Q8NGK4 314 aa15.72■□□□□ 0.11
USH1C-207ENST00000527720 ISL2Q96A47 359 aa15.72■□□□□ 0.11
USH1C-207ENST00000527720 UROC1Q96N76 676 aa15.72■□□□□ 0.11
USH1C-207ENST00000527720 TKTL2Q9H0I9 626 aa15.72■□□□□ 0.11
USH1C-207ENST00000527720 OSBPL2Q9H1P3 480 aa15.72■□□□□ 0.11
USH1C-207ENST00000527720 ARL8BQ9NVJ2 186 aa15.72■□□□□ 0.11
USH1C-207ENST00000527720 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.72■□□□□ 0.11
USH1C-207ENST00000527720 M0QZQ0 153 aa15.71■□□□□ 0.11
USH1C-207ENST00000527720 EPHB2P29323 1055 aa15.71■□□□□ 0.11
USH1C-207ENST00000527720 HTR7P34969 479 aa15.71■□□□□ 0.11
USH1C-207ENST00000527720 NPY2RP49146 381 aa15.71■□□□□ 0.11
USH1C-207ENST00000527720 RABGGTBP53611 331 aa15.71■□□□□ 0.11
USH1C-207ENST00000527720 COG7P83436 770 aa15.71■□□□□ 0.11
USH1C-207ENST00000527720 PDE1BQ01064 536 aa15.71■□□□□ 0.11
USH1C-207ENST00000527720 GRIK3Q13003 919 aa15.71■□□□□ 0.11
USH1C-207ENST00000527720 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.71■□□□□ 0.11
USH1C-207ENST00000527720 AGO3Q9H9G7 860 aaKnown RBP15.71■□□□□ 0.11
USH1C-207ENST00000527720 FBXO6Q9NRD1 293 aaPredicted RBP15.71■□□□□ 0.11
USH1C-207ENST00000527720 MCM8Q9UJA3 840 aa15.71■□□□□ 0.11
USH1C-207ENST00000527720 L3MBTL1Q9Y468 752 aa15.71■□□□□ 0.11
USH1C-207ENST00000527720 VGLL3A8MV65 326 aa15.71■□□□□ 0.11
USH1C-207ENST00000527720 FCHO1O14526 889 aa15.71■□□□□ 0.11
USH1C-207ENST00000527720 ZBTB24O43167 697 aaPredicted RBP15.71■□□□□ 0.11
USH1C-207ENST00000527720 PSMD3O43242 534 aa15.71■□□□□ 0.11
USH1C-207ENST00000527720 PLIN3O60664 434 aa15.71■□□□□ 0.11
USH1C-207ENST00000527720 ANP32DO95626 131 aa15.71■□□□□ 0.11
USH1C-207ENST00000527720 GSRP00390 522 aa15.71■□□□□ 0.11
USH1C-207ENST00000527720 AMHP03971 560 aa15.71■□□□□ 0.11
USH1C-207ENST00000527720 TBCCQ15814 346 aa15.71■□□□□ 0.11
USH1C-207ENST00000527720 FASTKD1Q53R41 847 aaKnown RBP15.71■□□□□ 0.11
USH1C-207ENST00000527720 ARID3BQ8IVW6 561 aaPredicted RBP15.71■□□□□ 0.11
USH1C-207ENST00000527720 CFAP61Q8NHU2 1237 aa15.71■□□□□ 0.11
USH1C-207ENST00000527720 EDEM1Q92611 657 aa15.71■□□□□ 0.11
USH1C-207ENST00000527720 PKMYT1Q99640 499 aa15.71■□□□□ 0.11
USH1C-207ENST00000527720 PAAF1Q9BRP4 392 aa15.71■□□□□ 0.11
USH1C-207ENST00000527720 STN1Q9H668 368 aaKnown RBP15.71■□□□□ 0.11
USH1C-207ENST00000527720 PIH1D1Q9NWS0 290 aaKnown RBP15.71■□□□□ 0.11
USH1C-207ENST00000527720 EMCNQ9ULC0 261 aa15.71■□□□□ 0.11
USH1C-207ENST00000527720 PADI3Q9ULW8 664 aa15.71■□□□□ 0.11
USH1C-207ENST00000527720 HBS1LQ9Y450 684 aaKnown RBP15.71■□□□□ 0.11
USH1C-207ENST00000527720 PSAT1Q9Y617 370 aa15.71■□□□□ 0.11
USH1C-207ENST00000527720 MYO16Q9Y6X6 1858 aa15.71■□□□□ 0.1
USH1C-207ENST00000527720 A0A0U1RQF3 1178 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 LRIG2O94898 1065 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 IGLV3-25P01717 112 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 SKIP12755 728 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 CD68P34810 354 aaPredicted RBP15.7■□□□□ 0.1
USH1C-207ENST00000527720 SPRP35270 261 aaPredicted RBP15.7■□□□□ 0.1
USH1C-207ENST00000527720 MAGEA12P43365 314 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 DSC3Q14574 896 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 N4BP2L1Q5TBK1 243 aaPredicted RBP15.7■□□□□ 0.1
USH1C-207ENST00000527720 CES4AQ5XG92 561 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 MBLAC2Q68D91 279 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 RGMBQ6NW40 437 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 TAC4Q86UU9 113 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 KLHDC8BQ8IXV7 354 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 DPF3Q92784 378 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 TEKT5Q96M29 485 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 RBBP8Q99708 897 aa15.7■□□□□ 0.1
USH1C-207ENST00000527720 C15orf41Q9Y2V0 281 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms