RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 OR12D3Q9UGF7 316 aa15.22■□□□□ 0.03
NUP54-217ENST00000514987 MCM8Q9UJA3 840 aa15.22■□□□□ 0.03
NUP54-217ENST00000514987 VANGL2Q9ULK5 521 aa15.22■□□□□ 0.03
NUP54-217ENST00000514987 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.22■□□□□ 0.03
NUP54-217ENST00000514987 RPS6KL1Q9Y6S9 549 aa15.22■□□□□ 0.03
NUP54-217ENST00000514987 MEIS3P2A8K0S8 358 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 FAM72CH0Y354 149 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 KCNK1O00180 336 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 FCHO1O14526 889 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 ANP32DO95626 131 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 ESRRAP11474 423 aaPredicted RBP15.21■□□□□ 0.03
NUP54-217ENST00000514987 HADHAP40939 763 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 CDK7P50613 346 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 SCNN1GP51170 649 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 CRADDP78560 199 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 GRIK3Q13003 919 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 CCDC153Q494R4 210 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 BRMS1LQ5PSV4 323 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 FAM182AQ5T1J6 154 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 FAM72AQ5TYM5 149 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 KCTD11Q693B1 232 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 FAM72DQ6L9T8 149 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 CXCL17Q6UXB2 119 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 BHLHA9Q7RTU4 235 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 GPRIN1Q7Z2K8 1008 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 LINC00523Q86TU6 105 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 TMEM135Q86UB9 458 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 FAM72BQ86X60 149 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 WDR75Q8IWA0 830 aaKnown RBP15.21■□□□□ 0.03
NUP54-217ENST00000514987 C3orf58Q8NDZ4 430 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 FAM13CQ8NE31 585 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 MYLPFQ96A32 169 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 ISL2Q96A47 359 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 TSGA13Q96PP4 275 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 IL22Q9GZX6 179 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 TKTL2Q9H0I9 626 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 RRAGCQ9HB90 399 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.21■□□□□ 0.03
NUP54-217ENST00000514987 NSMCE4AQ9NXX6 385 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 NR2E3Q9Y5X4 410 aa15.21■□□□□ 0.03
NUP54-217ENST00000514987 FAM237BA0A1B0GVD1 139 aa15.2■□□□□ 0.02
NUP54-217ENST00000514987 MYADML2A6NDP7 307 aa15.2■□□□□ 0.02
NUP54-217ENST00000514987 M0QZQ0 153 aa15.2■□□□□ 0.02
NUP54-217ENST00000514987 TPP1O14773 563 aa15.2■□□□□ 0.02
NUP54-217ENST00000514987 GYG2O15488 501 aa15.2■□□□□ 0.02
NUP54-217ENST00000514987 PLIN3O60664 434 aa15.2■□□□□ 0.02
NUP54-217ENST00000514987 ALDOAP04075 364 aaKnown RBP15.2■□□□□ 0.02
NUP54-217ENST00000514987 MPOP05164 745 aa15.2■□□□□ 0.02
NUP54-217ENST00000514987 CYBAP13498 195 aa15.2■□□□□ 0.02
NUP54-217ENST00000514987 EPHB2P29323 1055 aa15.2■□□□□ 0.02
NUP54-217ENST00000514987 SERPINB8P50452 374 aa15.2■□□□□ 0.02
NUP54-217ENST00000514987 CCNG1P51959 295 aa15.2■□□□□ 0.02
NUP54-217ENST00000514987 CSE1LP55060 971 aaKnown RBP15.2■□□□□ 0.02
NUP54-217ENST00000514987 TUSC3Q13454 348 aa15.2■□□□□ 0.02
NUP54-217ENST00000514987 FASTKD1Q53R41 847 aaKnown RBP15.2■□□□□ 0.02
NUP54-217ENST00000514987 BSPRYQ5W0U4 402 aa15.2■□□□□ 0.02
NUP54-217ENST00000514987 NAPEPLDQ6IQ20 393 aa15.2■□□□□ 0.02
NUP54-217ENST00000514987 ARID3BQ8IVW6 561 aaPredicted RBP15.2■□□□□ 0.02
NUP54-217ENST00000514987 LZTR1Q8N653 840 aa15.2■□□□□ 0.02
NUP54-217ENST00000514987 DNAAF3Q8N9W5 541 aa15.2■□□□□ 0.02
NUP54-217ENST00000514987 TRPV1Q8NER1 839 aa15.2■□□□□ 0.02
NUP54-217ENST00000514987 GIMAP7Q8NHV1 300 aa15.2■□□□□ 0.02
NUP54-217ENST00000514987 ADAM32Q8TC27 787 aa15.2■□□□□ 0.02
NUP54-217ENST00000514987 SREK1Q8WXA9 508 aaKnown RBP15.2■□□□□ 0.02
NUP54-217ENST00000514987 LPPQ93052 612 aa15.2■□□□□ 0.02
NUP54-217ENST00000514987 RNF34Q969K3 372 aa15.2■□□□□ 0.02
NUP54-217ENST00000514987 MECRQ9BV79 373 aa15.2■□□□□ 0.02
NUP54-217ENST00000514987 RNPEPL1Q9HAU8 725 aa15.2■□□□□ 0.02
NUP54-217ENST00000514987 ARL8BQ9NVJ2 186 aa15.2■□□□□ 0.02
NUP54-217ENST00000514987 C15orf41Q9Y2V0 281 aa15.2■□□□□ 0.02
NUP54-217ENST00000514987 HBS1LQ9Y450 684 aaKnown RBP15.2■□□□□ 0.02
NUP54-217ENST00000514987 TIMM13Q9Y5L4 95 aaPredicted RBP15.2■□□□□ 0.02
NUP54-217ENST00000514987 A0A0U1RQF3 1178 aa15.19■□□□□ 0.02
NUP54-217ENST00000514987 CASTOR2A6NHX0 329 aa15.19■□□□□ 0.02
NUP54-217ENST00000514987 A8MUI8 341 aa15.19■□□□□ 0.02
NUP54-217ENST00000514987 F5H423 210 aaPredicted RBP15.19■□□□□ 0.02
NUP54-217ENST00000514987 FGF10O15520 208 aaPredicted RBP15.19■□□□□ 0.02
NUP54-217ENST00000514987 ZBTB24O43167 697 aaPredicted RBP15.19■□□□□ 0.02
NUP54-217ENST00000514987 TIMM44O43615 452 aa15.19■□□□□ 0.02
NUP54-217ENST00000514987 SERPINE1P05121 402 aa15.19■□□□□ 0.02
NUP54-217ENST00000514987 CTSHP09668 335 aa15.19■□□□□ 0.02
NUP54-217ENST00000514987 SRGAP2BP0DMP2 458 aa15.19■□□□□ 0.02
NUP54-217ENST00000514987 TYMPP19971 482 aa15.19■□□□□ 0.02
NUP54-217ENST00000514987 TYK2P29597 1187 aa15.19■□□□□ 0.02
NUP54-217ENST00000514987 MAP2K2P36507 400 aa15.19■□□□□ 0.02
NUP54-217ENST00000514987 MAGEA12P43365 314 aa15.19■□□□□ 0.02
NUP54-217ENST00000514987 PDE1CQ14123 709 aaPredicted RBP15.19■□□□□ 0.02
NUP54-217ENST00000514987 DSC3Q14574 896 aa15.19■□□□□ 0.02
NUP54-217ENST00000514987 ANKRD20A4Q4UJ75 823 aa15.19■□□□□ 0.02
NUP54-217ENST00000514987 N4BP2L1Q5TBK1 243 aaPredicted RBP15.19■□□□□ 0.02
NUP54-217ENST00000514987 RGMBQ6NW40 437 aa15.19■□□□□ 0.02
NUP54-217ENST00000514987 KLHDC8BQ8IXV7 354 aa15.19■□□□□ 0.02
NUP54-217ENST00000514987 OR52K1Q8NGK4 314 aa15.19■□□□□ 0.02
NUP54-217ENST00000514987 PPP4R1Q8TF05 950 aa15.19■□□□□ 0.02
NUP54-217ENST00000514987 RSRC1Q96IZ7 334 aaKnown RBP15.19■□□□□ 0.02
NUP54-217ENST00000514987 TEKT5Q96M29 485 aa15.19■□□□□ 0.02
NUP54-217ENST00000514987 HAPLN3Q96S86 360 aa15.19■□□□□ 0.02
NUP54-217ENST00000514987 RBBP8Q99708 897 aa15.19■□□□□ 0.02
NUP54-217ENST00000514987 RTP3Q9BQQ7 232 aa15.19■□□□□ 0.02
NUP54-217ENST00000514987 CEP41Q9BYV8 373 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms