RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 ZNF662Q6ZS27 426 aa20.83■□□□□ 0.93
USP53-208ENST00000514305 SYT13Q7L8C5 426 aa20.83■□□□□ 0.93
USP53-208ENST00000514305 SLFN11Q7Z7L1 901 aa20.83■□□□□ 0.93
USP53-208ENST00000514305 CCDC117Q8IWD4 279 aaPredicted RBP20.83■□□□□ 0.93
USP53-208ENST00000514305 CPXM2Q8N436 756 aa20.83■□□□□ 0.93
USP53-208ENST00000514305 NTAN1Q96AB6 310 aa20.83■□□□□ 0.93
USP53-208ENST00000514305 ARHGEF38Q9NXL2 777 aa20.83■□□□□ 0.93
USP53-208ENST00000514305 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.82■□□□□ 0.92
USP53-208ENST00000514305 PROSCO94903 275 aa20.82■□□□□ 0.92
USP53-208ENST00000514305 ADH1CP00326 375 aa20.82■□□□□ 0.92
USP53-208ENST00000514305 SSR1P43307 286 aaKnown RBP20.82■□□□□ 0.92
USP53-208ENST00000514305 PITX1P78337 314 aaPredicted RBP20.82■□□□□ 0.92
USP53-208ENST00000514305 PREPLQ4J6C6 727 aaPredicted RBP20.82■□□□□ 0.92
USP53-208ENST00000514305 EFHC2Q5JST6 749 aa20.82■□□□□ 0.92
USP53-208ENST00000514305 FAM131BQ86XD5 332 aa20.82■□□□□ 0.92
USP53-208ENST00000514305 PSTKQ8IV42 348 aaKnown RBP20.82■□□□□ 0.92
USP53-208ENST00000514305 SYCE1Q8N0S2 351 aa20.82■□□□□ 0.92
USP53-208ENST00000514305 ZNF557Q8N988 423 aaPredicted RBP20.82■□□□□ 0.92
USP53-208ENST00000514305 TRIM44Q96DX7 344 aaPredicted RBP20.82■□□□□ 0.92
USP53-208ENST00000514305 LOXL4Q96JB6 756 aa20.82■□□□□ 0.92
USP53-208ENST00000514305 C1orf74Q96LT6 269 aa20.82■□□□□ 0.92
USP53-208ENST00000514305 HHIPQ96QV1 700 aa20.82■□□□□ 0.92
USP53-208ENST00000514305 OSGEPQ9NPF4 335 aa20.82■□□□□ 0.92
USP53-208ENST00000514305 STOML2Q9UJZ1 356 aa20.82■□□□□ 0.92
USP53-208ENST00000514305 REXO2Q9Y3B8 237 aaKnown RBP20.82■□□□□ 0.92
USP53-208ENST00000514305 AXIN1O15169 862 aa20.81■□□□□ 0.92
USP53-208ENST00000514305 ZNF135P52742 658 aaPredicted RBP20.81■□□□□ 0.92
USP53-208ENST00000514305 HDAC4P56524 1084 aa20.81■□□□□ 0.92
USP53-208ENST00000514305 DMC1Q14565 340 aa20.81■□□□□ 0.92
USP53-208ENST00000514305 MPPE1Q53F39 396 aa20.81■□□□□ 0.92
USP53-208ENST00000514305 BBS7Q8IWZ6 715 aa20.81■□□□□ 0.92
USP53-208ENST00000514305 ADGRG2Q8IZP9 1017 aa20.81■□□□□ 0.92
USP53-208ENST00000514305 DONSONQ9NYP3 566 aa20.81■□□□□ 0.92
USP53-208ENST00000514305 GOLGA6L9A6NEM1 432 aa20.8■□□□□ 0.92
USP53-208ENST00000514305 F5H5T6 163 aa20.8■□□□□ 0.92
USP53-208ENST00000514305 APBB3O95704 486 aa20.8■□□□□ 0.92
USP53-208ENST00000514305 KLKB1P03952 638 aa20.8■□□□□ 0.92
USP53-208ENST00000514305 ADRA1BP35368 520 aa20.8■□□□□ 0.92
USP53-208ENST00000514305 OGDHQ02218 1023 aa20.8■□□□□ 0.92
USP53-208ENST00000514305 GAD2Q05329 585 aa20.8■□□□□ 0.92
USP53-208ENST00000514305 ODF2Q5BJF6 829 aa20.8■□□□□ 0.92
USP53-208ENST00000514305 RABGAP1LQ5R372 815 aa20.8■□□□□ 0.92
USP53-208ENST00000514305 ERMARDQ5T6L9 678 aa20.8■□□□□ 0.92
USP53-208ENST00000514305 TTC39BQ5VTQ0 682 aaPredicted RBP20.8■□□□□ 0.92
USP53-208ENST00000514305 CHSY1Q86X52 802 aa20.8■□□□□ 0.92
USP53-208ENST00000514305 ZNF830Q96NB3 372 aaPredicted RBP20.8■□□□□ 0.92
USP53-208ENST00000514305 SPHK2Q9NRA0 654 aa20.8■□□□□ 0.92
USP53-208ENST00000514305 PPP2R2CQ9Y2T4 447 aa20.8■□□□□ 0.92
USP53-208ENST00000514305 DCDC2BA2VCK2 349 aa20.79■□□□□ 0.92
USP53-208ENST00000514305 SPOPO43791 374 aa20.79■□□□□ 0.92
USP53-208ENST00000514305 GREM1O60565 184 aa20.79■□□□□ 0.92
USP53-208ENST00000514305 CYP17A1P05093 508 aa20.79■□□□□ 0.92
USP53-208ENST00000514305 KRT7P08729 469 aa20.79■□□□□ 0.92
USP53-208ENST00000514305 TFE3P19532 575 aaPredicted RBP20.79■□□□□ 0.92
USP53-208ENST00000514305 HTR7P34969 479 aa20.79■□□□□ 0.92
USP53-208ENST00000514305 SH3PXD2AQ5TCZ1 1133 aa20.79■□□□□ 0.92
USP53-208ENST00000514305 OTUD1Q5VV17 481 aaPredicted RBP20.79■□□□□ 0.92
USP53-208ENST00000514305 C11orf63Q6NUN7 778 aa20.79■□□□□ 0.92
USP53-208ENST00000514305 DAAM2Q86T65 1068 aa20.79■□□□□ 0.92
USP53-208ENST00000514305 KBTBD6Q86V97 674 aa20.79■□□□□ 0.92
USP53-208ENST00000514305 SPNS2Q8IVW8 549 aa20.79■□□□□ 0.92
USP53-208ENST00000514305 FAM217AQ8IXS0 508 aa20.79■□□□□ 0.92
USP53-208ENST00000514305 C12orf50Q8NA57 414 aaPredicted RBP20.79■□□□□ 0.92
USP53-208ENST00000514305 EZH1Q92800 747 aaPredicted RBP20.79■□□□□ 0.92
USP53-208ENST00000514305 TMA16Q96EY4 203 aaKnown RBP20.79■□□□□ 0.92
USP53-208ENST00000514305 BTBD6Q96KE9 485 aa20.79■□□□□ 0.92
USP53-208ENST00000514305 ALS2CR12Q96Q35 445 aa20.79■□□□□ 0.92
USP53-208ENST00000514305 XPO6Q96QU8 1125 aaKnown RBP20.79■□□□□ 0.92
USP53-208ENST00000514305 TRIM7Q9C029 511 aa20.79■□□□□ 0.92
USP53-208ENST00000514305 SIK2Q9H0K1 926 aa20.79■□□□□ 0.92
USP53-208ENST00000514305 OSBPL2Q9H1P3 480 aa20.79■□□□□ 0.92
USP53-208ENST00000514305 ARRDC1-AS1Q9H2J1 176 aa20.79■□□□□ 0.92
USP53-208ENST00000514305 RETREG1Q9H6L5 497 aa20.79■□□□□ 0.92
USP53-208ENST00000514305 POLR3BQ9NW08 1133 aaPredicted RBP20.79■□□□□ 0.92
USP53-208ENST00000514305 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.79■□□□□ 0.92
USP53-208ENST00000514305 MYOFQ9NZM1 2061 aa20.78■□□□□ 0.92
USP53-208ENST00000514305 TMEM110-MUSTN1A8MSY1 372 aa20.78■□□□□ 0.92
USP53-208ENST00000514305 SLC30A4O14863 429 aa20.78■□□□□ 0.92
USP53-208ENST00000514305 LRCH4O75427 683 aa20.78■□□□□ 0.92
USP53-208ENST00000514305 PAGE1O75459 146 aa20.78■□□□□ 0.92
USP53-208ENST00000514305 EPN2O95208 641 aa20.78■□□□□ 0.92
USP53-208ENST00000514305 MSNP26038 577 aaKnown RBP20.78■□□□□ 0.92
USP53-208ENST00000514305 MIPP30301 263 aa20.78■□□□□ 0.92
USP53-208ENST00000514305 OPRD1P41143 372 aa20.78■□□□□ 0.92
USP53-208ENST00000514305 SEC13P55735 322 aa20.78■□□□□ 0.92
USP53-208ENST00000514305 SCAPQ12770 1279 aa20.78■□□□□ 0.92
USP53-208ENST00000514305 ELF2Q15723 593 aa20.78■□□□□ 0.92
USP53-208ENST00000514305 AASDHQ4L235 1098 aaPredicted RBP20.78■□□□□ 0.92
USP53-208ENST00000514305 C2orf27AQ580R0 203 aa20.78■□□□□ 0.92
USP53-208ENST00000514305 MPP7Q5T2T1 576 aa20.78■□□□□ 0.92
USP53-208ENST00000514305 NUDT18Q6ZVK8 323 aa20.78■□□□□ 0.92
USP53-208ENST00000514305 MAP7D3Q8IWC1 876 aa20.78■□□□□ 0.92
USP53-208ENST00000514305 TSTD1Q8NFU3 115 aa20.78■□□□□ 0.92
USP53-208ENST00000514305 TPCN2Q8NHX9 752 aa20.78■□□□□ 0.92
USP53-208ENST00000514305 KIAA1524Q8TCG1 905 aa20.78■□□□□ 0.92
USP53-208ENST00000514305 DDI1Q8WTU0 396 aa20.78■□□□□ 0.92
USP53-208ENST00000514305 TEKT4Q8WW24 435 aa20.78■□□□□ 0.92
USP53-208ENST00000514305 LACRTQ9GZZ8 138 aa20.78■□□□□ 0.92
USP53-208ENST00000514305 STIM2Q9P246 746 aa20.78■□□□□ 0.92
USP53-208ENST00000514305 PCSK1NQ9UHG2 260 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms